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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6NTS | 0510 | 2023-04-21 | 2019-01-30 | 3.63 | 4.31 | 2.98 | 3.6 | 0.016 | 0.51 | 0.0 | 0.03 | 13.23 | 0.00 | 1.917 | 2.06 | 0.00 | 3.8 | 96.2 | 0.0 | -2.08 | 0.89 | 0.77 | 0.59 | 3.6 | 0.002 | 0.62 | 0.0 | 0.04 | 15.01 | 0.00 | 2.074 | 8.23 | 0.00 | 2.2 | 97.8 | 0.0 | 0.88 | 2.31 | 0.92 | 0.85 | 1.06 | 9956 | 1240 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 8EUG | 24412 | 2023-04-25 | 2022-10-18 | 2.8 | 2.82 | — | 2.8 | 0.005 | 0.53 | 0.0 | 0.03 | 15.48 | 0.00 | 2.091 | 7.67 | 0.47 | 3.5 | 96.2 | 0.3 | -0.23 | 0.81 | 0.81 | 3.22 | 2.8 | 0.004 | 0.59 | 0.0 | 0.04 | 15.74 | 0.00 | 2.056 | 9.21 | 1.87 | 4.0 | 95.8 | 0.2 | 0.13 | 0.30 | 0.81 | 0.82 | 3.01 | 123162 | 7108 | 47 | 3138 | 1 | 0 | 0 | logfile |
✔ | 6X35 | 22018 | 2023-04-21 | 2020-05-21 | 4.2 | 4.14 | — | 4.2 | 0.001 | 0.37 | 0.0 | 0.03 | 8.42 | 0.00 | 2.202 | 3.37 | 0.05 | 1.8 | 98.1 | 0.0 | -1.11 | 0.52 | 0.67 | — | 4.1 | 0.003 | 0.64 | 0.0 | 0.04 | 11.49 | 0.00 | 2.229 | 8.53 | 0.02 | 3.2 | 96.8 | 0.0 | 1.06 | 1.69 | 0.57 | 0.72 | — | 111888 | 14740 | 16 | 0 | 1432 | 0 | 0 | logfile |
✔ | 7oDT | 12847 | 2023-04-21 | 2021-04-30 | 3.1 | 3.31 | — | 3.1 | 0.003 | 0.41 | 0.0 | 0.03 | 11.01 | 0.01 | 1.988 | 5.28 | 0.53 | 1.2 | 98.8 | 0.0 | 1.05 | 0.77 | 0.79 | 2.84 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 14.67 | 0.00 | 1.891 | 10.64 | 0.27 | 2.6 | 97.4 | 0.0 | 0.69 | 0.71 | 0.78 | 0.83 | 2.53 | 110473 | 9585 | 71 | 1526 | 110 | 0 | 0 | logfile |
✔ | 8A3B | 15110 | 2023-04-23 | 2022-06-07 | 3.1 | 2.31 | 2.85 | 2.9 | 0.003 | 0.55 | 0.0 | 0.03 | 14.17 | 0.00 | 2.091 | 4.59 | 0.00 | 0.9 | 99.1 | 0.0 | 2.21 | 0.73 | 0.72 | 2.28 | 2.1 | 0.004 | 0.59 | 0.0 | 0.04 | 16.26 | 0.00 | 2.134 | 6.73 | 0.49 | 1.6 | 98.4 | 0.0 | 2.23 | 0.49 | 0.74 | 0.77 | 2.04 | 14448 | 1792 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DBP | 30161 | 2023-04-22 | 2020-10-21 | 4.5 | 5.32 | — | 4.3 | 0.003 | 0.45 | 0.0 | 0.03 | 27.36 | 0.00 | 2.226 | 8.54 | 0.57 | 4.4 | 94.9 | 0.7 | -0.94 | 0.87 | 0.76 | — | 4.3 | 0.005 | 0.66 | 0.0 | 0.03 | 30.47 | 0.00 | 2.147 | 27.18 | 0.00 | 3.7 | 96.3 | 0.0 | 0.77 | 2.53 | 0.90 | 0.74 | — | 13801 | 837 | 11 | 350 | 0 | 0 | 0 | logfile |
✔ | 7XQG | 33395 | 2023-04-21 | 2022-05-07 | 3.8 | 4.58 | 3.85 | 4.2 | 0.002 | 0.46 | 0.0 | 0.03 | 11.19 | 0.00 | 2.268 | 4.64 | 5.00 | 1.5 | 98.0 | 0.5 | 2.98 | 0.79 | 0.85 | 2.01 | 4.2 | 0.003 | 0.78 | 0.0 | 0.04 | 15.05 | 0.00 | 2.291 | 8.32 | 0.19 | 3.6 | 96.4 | 0.0 | 2.37 | 0.77 | 0.80 | 0.85 | 1.40 | 10206 | 1206 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 6X33 | 22016 | 2023-04-22 | 2020-05-21 | 4.2 | 4.35 | — | 4.3 | 0.001 | 0.37 | 0.0 | 0.03 | 9.39 | 0.00 | 2.304 | 3.24 | 0.00 | 1.9 | 98.1 | 0.0 | -4.22 | 0.55 | 0.69 | — | 4.3 | 0.003 | 0.64 | 0.0 | 0.04 | 11.75 | 0.00 | 2.056 | 8.49 | 0.06 | 3.0 | 97.0 | 0.0 | 0.21 | 0.65 | 0.57 | 0.72 | — | 112372 | 14796 | 16 | 0 | 1436 | 0 | 0 | logfile |
✔ | 7XSM | 33427 | 2023-04-22 | 2022-05-14 | 4.01 | 4.70 | 4.03 | 4.0 | 0.002 | 0.47 | 0.0 | 0.03 | 15.76 | 0.00 | 1.969 | 7.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.75 | — | 4.0 | 0.007 | 0.76 | 0.0 | 0.04 | 19.93 | 0.01 | 1.773 | 49.65 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.92 | 0.82 | — | 12464 | 0 | 1 | 388 | 0 | 0 | 4165 | logfile |
✔ | 6PCT | 20307 | 2023-04-27 | 2019-06-18 | 2.8 | 3.01 | — | 2.9 | 0.006 | 0.43 | 2.0 | 0.03 | 12.76 | 0.03 | 1.891 | 2.96 | 2.50 | 6.3 | 93.6 | 0.1 | -3.70 | 0.66 | 0.85 | 4.28 | 2.9 | 0.005 | 0.70 | 0.0 | 0.04 | 14.72 | 0.01 | 2.058 | 8.14 | 3.81 | 6.8 | 93.1 | 0.1 | -1.02 | 0.41 | 0.68 | 0.88 | 4.35 | 72198 | 964 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 8E55 | 27903 | 2023-04-22 | 2022-08-19 | 3.85 | 4.07 | 3.34 | 4.0 | 0.007 | 0.67 | 0.0 | 0.03 | 12.36 | 0.00 | 2.252 | 3.39 | 0.50 | 2.5 | 97.5 | 0.0 | 1.17 | 0.66 | 0.60 | -0.11 | 4.0 | 0.003 | 0.55 | 0.0 | 0.03 | 16.13 | 0.00 | 2.262 | 10.49 | 0.00 | 1.8 | 98.2 | 0.0 | 4.40 | 1.43 | 0.69 | 0.70 | -0.11 | 12176 | 780 | 4 | 0 | 0 | 0 | 6104 | logfile |
✔ | 6T2V | 10370 | 2023-04-26 | 2019-10-09 | 3.8 | 4.58 | — | 3.8 | 0.002 | 0.45 | 0.0 | 0.03 | 13.03 | 0.01 | 2.213 | 4.84 | 3.02 | 2.0 | 98.0 | 0.0 | -3.62 | 0.88 | 0.73 | 0.79 | 3.8 | 0.004 | 0.72 | 0.0 | 0.04 | 15.71 | 0.00 | 2.160 | 15.45 | 0.17 | 4.1 | 95.9 | 0.0 | 0.33 | 2.38 | 0.90 | 0.80 | 0.62 | 23826 | 2847 | 4 | 54 | 0 | 0 | 0 | logfile |
✔ | 7X58 | 33011 | 2023-04-21 | 2022-03-04 | 3.93 | 4.15 | — | 3.9 | 0.003 | 0.56 | 0.0 | 0.03 | 27.31 | 0.00 | 2.221 | 7.16 | 0.00 | 0.9 | 99.1 | 0.0 | 0.68 | 0.86 | 0.80 | 1.58 | 3.9 | 0.004 | 0.72 | 0.0 | 0.04 | 29.78 | 0.00 | 2.201 | 14.33 | 1.19 | 2.4 | 97.6 | 0.0 | 2.26 | 1.37 | 0.88 | 0.83 | 0.76 | 9775 | 596 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 7YoZ | 33991 | 2023-04-21 | 2022-08-02 | 4.3 | 4.57 | 4.38 | 4.3 | 0.003 | 0.55 | 0.0 | 0.03 | 27.62 | 0.00 | 2.269 | 6.78 | 0.00 | 1.4 | 98.6 | 0.0 | 0.64 | 0.85 | 0.72 | — | 4.3 | 0.004 | 0.74 | 0.0 | 0.04 | 29.71 | 0.01 | 2.196 | 19.72 | 0.00 | 1.9 | 98.1 | 0.0 | 0.22 | 1.82 | 0.89 | 0.83 | — | 9752 | 594 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 8G8G | 29850 | 2023-04-23 | 2023-02-17 | 3.2 | 4.22 | 3.27 | 3.4 | 0.005 | 0.59 | 0.0 | 0.03 | 27.75 | 0.00 | 1.622 | 6.71 | 0.64 | 1.8 | 98.2 | 0.0 | -0.50 | 0.70 | 0.50 | 0.77 | 3.0 | 0.004 | 0.65 | 0.0 | 0.03 | 28.86 | 0.00 | 2.193 | 11.69 | 0.13 | 2.9 | 97.1 | 0.0 | 1.87 | 1.57 | 0.91 | 0.87 | 1.73 | 14558 | 931 | 11 | 348 | 0 | 0 | 0 | logfile |
✔ | 7P1J | 13162 | 2023-04-20 | 2021-07-01 | 3.04 | 4.02 | 2.96 | 4.0 | 0.002 | 0.48 | 0.0 | 0.03 | 8.89 | 0.00 | 2.305 | 5.96 | 2.29 | 3.5 | 96.5 | 0.0 | 2.14 | 0.65 | 0.71 | 0.64 | 4.0 | 0.003 | 0.87 | 0.0 | 0.04 | 14.68 | 0.00 | 2.227 | 16.91 | 0.72 | 6.3 | 93.7 | 0.0 | 0.73 | 1.43 | 0.66 | 0.74 | 0.77 | 6502 | 868 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGG | 22326 | 2023-04-20 | 2020-07-19 | 4.88 | 8.00 | — | 7.7 | 0.002 | 0.46 | 0.0 | 0.03 | 13.22 | 0.00 | 1.988 | 54.49 | 0.00 | 3.3 | 96.5 | 0.2 | 1.67 | 0.66 | 0.64 | — | 7.5 | 0.002 | 0.47 | 0.0 | 0.03 | 12.80 | 0.00 | 1.958 | 77.81 | 0.00 | 4.3 | 95.7 | 0.0 | 1.53 | 1.24 | 0.66 | 0.69 | — | 4210 | 506 | 1 | 0 | 0 | 0 | 28 | logfile |
✔ | 7A8P | 11679 | 2023-04-20 | 2020-08-30 | 3.5 | 3.61 | 3.44 | 3.6 | 0.004 | 0.53 | 0.0 | 0.03 | 16.10 | 0.00 | 2.165 | 2.86 | 0.63 | 2.2 | 97.8 | 0.0 | 0.97 | 0.73 | 0.78 | 1.97 | 3.5 | 0.004 | 0.60 | 0.0 | 0.04 | 16.93 | 0.00 | 2.005 | 9.28 | 0.13 | 2.0 | 98.0 | 0.0 | 2.26 | 0.49 | 0.74 | 0.80 | 2.04 | 7305 | 911 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WiJ | 32531 | 2023-04-22 | 2022-01-03 | 3.17 | 3.08 | 3.01 | 3.2 | 0.002 | 0.50 | 0.0 | 0.03 | 14.49 | 0.00 | 2.243 | 4.52 | 0.00 | 0.4 | 99.6 | 0.0 | 2.75 | 0.70 | 0.85 | 1.82 | 3.2 | 0.003 | 0.53 | 0.0 | 0.03 | 15.57 | 0.00 | 2.262 | 4.68 | 0.00 | 0.8 | 99.2 | 0.0 | 3.40 | 0.26 | 0.71 | 0.87 | 1.79 | 12396 | 1602 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EZ0 | 31385 | 2023-04-20 | 2021-06-01 | 3.14 | 3.26 | — | 3.2 | 0.003 | 0.56 | 0.0 | 0.03 | 14.43 | 0.00 | 1.804 | 2.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.74 | 0.79 | — | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 15.53 | 0.00 | 1.862 | 8.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.91 | 0.76 | 0.86 | — | 8306 | 0 | 1 | 387 | 27 | 0 | 0 | logfile |