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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5KUF | 8289 | 2023-04-26 | 2016-07-13 | 3.8 | 3.80 | — | 3.7 | 0.009 | 1.02 | 0.0 | 0.05 | 8.87 | 0.01 | 2.021 | 29.22 | 0.08 | 15.5 | 84.4 | 0.1 | -5.82 | 0.61 | 0.71 | 1.68 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 13.57 | 0.00 | 2.155 | 13.20 | 0.35 | 5.9 | 94.1 | 0.0 | -1.38 | 1.57 | 0.61 | 0.71 | 1.29 | 23728 | 3000 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2023-04-19 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.18 | 0.0 | 0.04 | 10.31 | 0.00 | 2.148 | 15.12 | 0.00 | 32.0 | 68.0 | 0.0 | -5.66 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5Lii | 4053 | 2023-04-19 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | 3.8 | 0.003 | 0.88 | 0.0 | 0.04 | 15.96 | 0.01 | 2.201 | 13.15 | 1.41 | 14.6 | 84.7 | 0.7 | -4.22 | 0.87 | 0.56 | 0.67 | 1.49 | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 5GMK | 9525 | 2023-04-28 | 2016-07-14 | 3.4 | 3.52 | — | 3.5 | 0.012 | 1.25 | 16.0 | 0.07 | 13.99 | 0.01 | 1.378 | 19.35 | 2.77 | 7.7 | 91.2 | 1.0 | -3.71 | 0.47 | 0.53 | 1.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 75273 | 8026 | 51 | 404 | 981 | 0 | 0 | logfile |
✔ | 5LJ3 | 4055 | 2023-04-22 | 2016-07-17 | 3.8 | 3.92 | — | 3.8 | 0.007 | 1.46 | 40.0 | 0.09 | 17.30 | 0.01 | 1.631 | 5.99 | 8.54 | 8.1 | 90.7 | 1.2 | -1.69 | 0.70 | 0.81 | 1.37 | 3.8 | 0.003 | 0.72 | 0.0 | 0.04 | 17.08 | 0.00 | 2.001 | 14.49 | 0.45 | 4.9 | 94.9 | 0.2 | 0.41 | 0.85 | 0.69 | 0.78 | 1.39 | 63161 | 7305 | 45 | 458 | 142 | 0 | 0 | logfile |
✔ | 5LJo | 4061 | 2023-04-27 | 2016-07-19 | 4.9 | 7.28 | — | 5.9 | 0.014 | 1.69 | 1.0 | 0.08 | 11.01 | 0.01 | 2.147 | 5.45 | 0.15 | 9.4 | 86.8 | 3.8 | -2.52 | 0.69 | 0.58 | — | 5.9 | 0.003 | 0.70 | 0.0 | 0.04 | 12.76 | 0.00 | 1.923 | 18.84 | 0.00 | 12.3 | 87.3 | 0.4 | -2.48 | 1.32 | 0.80 | 0.80 | — | 24947 | 1624 | 5 | 0 | 0 | 0 | 12255 | logfile |
✔ | 5LKi | 4068 | 2023-04-20 | 2016-07-22 | 3.46 | 3.72 | — | 3.5 | 0.013 | 1.24 | 5.0 | 0.06 | 10.71 | 0.01 | 0.579 | 39.51 | 0.18 | 7.7 | 91.7 | 0.6 | -4.39 | 0.65 | 0.79 | 2.37 | 3.5 | 0.004 | 0.83 | 0.0 | 0.04 | 15.10 | 0.00 | 2.088 | 15.46 | 0.70 | 7.1 | 92.5 | 0.4 | 0.24 | 0.81 | 0.63 | 0.80 | 1.65 | 55415 | 7135 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LL6 | 4071 | 2023-04-20 | 2016-07-26 | 3.9 | 4.01 | — | 3.9 | 0.012 | 1.50 | 6.0 | 0.11 | 19.04 | 0.01 | 0.924 | 4.96 | 2.53 | 10.6 | 85.7 | 3.7 | -3.86 | 0.69 | 0.82 | 1.20 | 3.9 | 0.009 | 1.04 | 0.0 | 0.05 | 19.21 | 0.01 | 1.715 | 25.88 | 1.94 | 13.6 | 85.6 | 0.9 | -3.02 | 0.89 | 0.70 | 0.81 | 0.98 | 55262 | 3429 | 20 | 1325 | 5 | 0 | 0 | logfile |
✔ | 5LMR | 4077 | 2023-04-20 | 2016-08-01 | 4.45 | 4.71 | 4.60 | 4.4 | 0.008 | 1.39 | 20.0 | 0.12 | 20.52 | 0.02 | 1.426 | 17.92 | 16.73 | 8.7 | 88.5 | 2.8 | -2.16 | 0.79 | 0.74 | — | 4.4 | 0.008 | 0.83 | 0.0 | 0.04 | 16.97 | 0.01 | 1.974 | 37.25 | 0.05 | 9.4 | 90.1 | 0.5 | -2.00 | 1.61 | 0.84 | 0.85 | — | 55662 | 2628 | 29 | 1609 | 4 | 0 | 0 | logfile |
✔ | 5LMQ | 4076 | 2023-04-20 | 2016-08-01 | 4.2 | 4.46 | 4.25 | 4.2 | 0.009 | 1.44 | 30.0 | 0.12 | 20.84 | 0.02 | 1.387 | 19.43 | 21.46 | 10.5 | 86.1 | 3.4 | -2.56 | 0.80 | 0.76 | — | 4.2 | 0.004 | 0.77 | 0.0 | 0.04 | 16.79 | 0.01 | 1.832 | 30.18 | 0.05 | 8.7 | 90.9 | 0.5 | -1.28 | 1.62 | 0.84 | 0.85 | — | 55841 | 2635 | 29 | 1612 | 66 | 0 | 0 | logfile |
✔ | 5LMN | 4073 | 2023-04-20 | 2016-08-01 | 3.55 | 3.68 | 3.61 | 3.6 | 0.007 | 1.42 | 35.0 | 0.12 | 20.67 | 0.01 | 0.925 | 19.85 | 21.59 | 10.4 | 86.7 | 2.8 | -2.30 | 0.79 | 0.88 | 1.35 | 3.6 | 0.004 | 0.72 | 0.0 | 0.04 | 17.13 | 0.00 | 1.859 | 19.78 | 0.87 | 7.4 | 92.2 | 0.3 | -1.09 | 1.56 | 0.77 | 0.84 | 1.29 | 54149 | 2623 | 27 | 1534 | 129 | 0 | 0 | logfile |
✔ | 5LMU | 4080 | 2023-04-20 | 2016-08-01 | 4.0 | 4.12 | 4.00 | 4.0 | 0.008 | 1.44 | 43.0 | 0.12 | 21.34 | 0.02 | 1.289 | 21.15 | 25.30 | 12.0 | 84.2 | 3.8 | -2.57 | 0.73 | 0.78 | — | 4.0 | 0.005 | 0.80 | 0.0 | 0.04 | 17.69 | 0.01 | 1.812 | 26.28 | 0.84 | 7.7 | 91.8 | 0.5 | -1.57 | 0.88 | 0.75 | 0.83 | — | 55195 | 2550 | 29 | 1612 | 82 | 0 | 0 | logfile |
✔ | 5LMo | 4074 | 2023-04-20 | 2016-08-01 | 4.3 | 4.71 | 4.30 | 4.3 | 0.009 | 1.47 | 50.0 | 0.12 | 20.86 | 0.01 | 0.865 | 18.49 | 20.40 | 10.6 | 85.8 | 3.6 | -2.76 | 0.80 | 0.69 | — | 4.3 | 0.005 | 0.76 | 0.0 | 0.04 | 16.78 | 0.01 | 0.968 | 35.61 | 0.00 | 9.3 | 90.2 | 0.5 | -1.75 | 2.17 | 0.87 | 0.84 | — | 54110 | 2622 | 29 | 1533 | 110 | 0 | 0 | logfile |
✔ | 5LMV | 4083 | 2023-04-21 | 2016-08-01 | 4.9 | 6.86 | 6.64 | 6.7 | 0.008 | 1.34 | 34.0 | 0.11 | 20.14 | 0.01 | 0.977 | 14.22 | 15.18 | 9.6 | 87.9 | 2.5 | -1.98 | 0.70 | 0.58 | — | 6.7 | 0.004 | 0.78 | 0.0 | 0.04 | 17.42 | 0.01 | 1.879 | 35.96 | 0.04 | 8.0 | 91.5 | 0.5 | -1.87 | 2.22 | 0.78 | 0.77 | — | 59470 | 3124 | 30 | 1612 | 4 | 0 | 0 | logfile |
✔ | 5LMT | 4079 | 2023-04-20 | 2016-08-01 | 4.15 | 4.33 | 4.20 | 4.2 | 0.008 | 1.43 | 21.0 | 0.12 | 20.76 | 0.02 | 1.290 | 18.78 | 22.35 | 11.9 | 84.8 | 3.3 | -2.73 | 0.77 | 0.76 | — | 4.1 | 0.004 | 0.76 | 0.0 | 0.04 | 16.49 | 0.01 | 1.832 | 27.27 | 0.09 | 8.9 | 90.8 | 0.3 | -1.60 | 0.91 | 0.80 | 0.83 | — | 55776 | 2622 | 31 | 1612 | 88 | 0 | 0 | logfile |
✔ | 5LNK | 4093 | 2023-04-22 | 2016-08-04 | 3.9 | 3.95 | — | 3.9 | 0.007 | 1.05 | 0.0 | 1.04 | 10.85 | 0.01 | 2.038 | 25.44 | 0.32 | 12.6 | 86.9 | 0.5 | -4.85 | 0.76 | 0.79 | 1.96 | 3.9 | 0.009 | 1.80 | 0.0 | 0.31 | 16.78 | 0.01 | 1.969 | 22.75 | 1.11 | 11.6 | 88.1 | 0.3 | -1.76 | 0.92 | 0.77 | 0.80 | 0.77 | 63760 | 7918 | 61 | 0 | 144 | 0 | 0 | logfile |
✔ | 5SY1 | 8315 | 2023-04-22 | 2016-08-10 | 3.9 | 3.66 | 3.96 | 3.8 | 0.008 | 1.02 | 0.0 | 0.05 | 10.05 | 0.01 | 1.524 | 5.60 | 0.08 | 7.1 | 92.7 | 0.1 | -5.23 | 0.51 | 0.62 | 1.65 | 3.7 | 0.003 | 0.75 | 0.0 | 0.04 | 15.30 | 0.00 | 2.152 | 10.11 | 0.24 | 5.4 | 94.6 | 0.0 | 0.02 | 0.93 | 0.62 | 0.78 | 1.19 | 11462 | 1458 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 5SZS | 8331 | 2023-04-29 | 2016-08-15 | 3.4 | 3.57 | — | 3.5 | 0.024 | 3.04 | 3.0 | 0.20 | 11.59 | 0.01 | 1.476 | 3.47 | 0.68 | 5.7 | 93.7 | 0.6 | -0.27 | 0.85 | 0.83 | 2.56 | 3.5 | 0.003 | 0.71 | 0.0 | 0.05 | 13.96 | 0.00 | 2.161 | 5.80 | 0.26 | 5.2 | 94.5 | 0.3 | 0.03 | 0.71 | 0.85 | 0.86 | 2.55 | 30306 | 3531 | 69 | 0 | 222 | 0 | 0 | logfile |
✔ | 5T15 | 8342 | 2023-04-24 | 2016-08-17 | 3.6 | 3.80 | 3.88 | 3.7 | 0.007 | 1.01 | 0.0 | 0.05 | 10.37 | 0.01 | 1.373 | 4.08 | 0.45 | 11.5 | 88.2 | 0.3 | -5.71 | 0.73 | 0.78 | 2.03 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 13.98 | 0.00 | 2.102 | 8.84 | 0.26 | 10.0 | 89.8 | 0.2 | -1.55 | 1.47 | 0.74 | 0.79 | 1.03 | 120796 | 13508 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 5T4D | 8354 | 2023-04-23 | 2016-08-29 | 3.0 | 3.12 | 2.96 | 3.1 | 0.010 | 0.81 | 0.0 | 0.05 | 8.91 | 0.00 | 2.120 | 12.34 | 0.26 | 4.4 | 95.6 | 0.0 | -2.69 | 0.75 | 0.79 | 4.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14876 | 1852 | 8 | 0 | 12 | 0 | 0 | logfile |