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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7V6N | 31743 | 2023-11-21 | 2021-08-20 | 3.99 | 2.98 | — | 3.3 | 0.013 | 1.54 | 22.0 | 0.11 | 13.59 | 0.00 | 1.225 | 8.65 | 8.11 | 4.0 | 94.9 | 1.1 | 1.46 | 0.71 | 0.48 | 0.48 | 2.8 | 0.004 | 0.78 | 0.0 | 0.04 | 14.31 | 0.00 | 2.045 | 18.53 | 0.30 | 6.9 | 92.8 | 0.3 | -1.34 | 1.52 | 0.76 | 0.57 | 1.18 | 34448 | 4663 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X3J | 32989 | 2023-11-15 | 2022-03-01 | 4.2 | 3.84 | 4.27 | 3.9 | 0.004 | 0.86 | 1.0 | 0.05 | 14.04 | 0.00 | 1.136 | 5.37 | 0.10 | 3.2 | 96.8 | 0.0 | -5.53 | 0.59 | 0.53 | — | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 14.31 | 0.00 | 1.972 | 12.43 | 0.04 | 4.5 | 95.5 | 0.0 | -0.98 | 1.63 | 0.61 | 0.57 | — | 63188 | 8209 | 32 | 0 | 16 | 0 | 0 | logfile |
✔ | 8FTE | 29424 | 2023-11-16 | 2023-01-12 | 3.8 | 3.91 | 3.67 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 12.35 | 0.00 | 2.203 | 12.31 | 5.56 | 3.4 | 96.6 | 0.0 | 0.06 | 0.48 | 0.50 | 0.06 | 3.8 | 0.003 | 0.73 | 0.0 | 0.04 | 14.62 | 0.00 | 2.147 | 8.37 | 0.44 | 6.4 | 93.6 | 0.0 | 1.70 | 1.58 | 0.56 | 0.57 | 0.63 | 14564 | 2046 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iBN | 35344 | 2023-11-14 | 2023-02-10 | 3.03 | 3.55 | 3.13 | 3.5 | 0.007 | 0.99 | 0.0 | 0.06 | 13.66 | 0.00 | 2.296 | 8.00 | 0.00 | 4.0 | 96.0 | 0.0 | -1.98 | 0.60 | 0.53 | 0.83 | 3.5 | 0.003 | 0.62 | 0.0 | 0.05 | 15.79 | 0.00 | 2.053 | 15.49 | 0.45 | 4.1 | 95.9 | 0.0 | -0.82 | 1.18 | 0.62 | 0.57 | 0.91 | 8940 | 1224 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 3JAU | 6366 | 2023-11-15 | 2015-06-24 | 4.8 | 4.76 | — | 6.0 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 10.72 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | 5.4 | 0.003 | 0.70 | 0.0 | 0.04 | 13.62 | 0.00 | 2.034 | 12.63 | 0.00 | 4.6 | 95.0 | 0.4 | -1.07 | 1.45 | 0.24 | 0.57 | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZPJ | 14855 | 2023-11-18 | 2022-04-27 | 3.81 | 3.24 | 3.86 | 6.5 | 0.004 | 0.86 | 0.0 | 0.05 | 13.19 | 0.01 | 2.159 | 2.94 | 0.67 | 3.3 | 96.7 | 0.0 | 0.22 | 0.54 | 0.33 | 0.15 | 2.2 | 0.003 | 0.68 | 0.0 | 0.04 | 15.41 | 0.01 | 1.919 | 13.12 | 0.67 | 4.4 | 95.6 | 0.0 | -0.01 | 1.51 | 0.64 | 0.57 | 0.25 | 23479 | 1355 | 3 | 55 | 0 | 0 | 11508 | logfile |
✔ | 6G90 | 4364 | 2023-11-15 | 2018-04-10 | 4.0 | 4.12 | — | 3.9 | 0.009 | 1.30 | 2.0 | 0.07 | 12.73 | 0.03 | 1.687 | 19.01 | 0.57 | 7.8 | 91.4 | 0.8 | -3.55 | 0.51 | 0.41 | — | 3.9 | 0.004 | 0.90 | 0.0 | 0.04 | 15.35 | 0.01 | 2.101 | 18.34 | 0.33 | 7.3 | 92.4 | 0.3 | -0.87 | 3.85 | 0.58 | 0.57 | — | 65050 | 6796 | 43 | 474 | 223 | 0 | 0 | logfile |
✔ | 7U13 | 26276 | 2023-11-13 | 2022-02-19 | 2.9 | 3.67 | — | 4.2 | 0.018 | 2.43 | 0.0 | 0.07 | 16.46 | 0.01 | 2.120 | 29.95 | 6.30 | 11.3 | 88.0 | 0.8 | -3.06 | 0.30 | 0.47 | 1.37 | 4.2 | 0.005 | 1.02 | 0.0 | 0.06 | 17.50 | 0.00 | 2.138 | 20.90 | 3.94 | 11.8 | 88.2 | 0.0 | -4.59 | 6.73 | 0.33 | 0.57 | 1.35 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8DWJ | 27756 | 2023-11-13 | 2022-08-01 | 3.9 | 3.19 | 3.82 | 3.1 | 0.005 | 1.05 | 0.0 | 0.06 | 15.49 | 0.01 | 2.218 | 13.71 | 0.33 | 5.9 | 94.1 | 0.0 | -2.71 | 0.33 | 0.57 | 0.88 | 3.1 | 0.003 | 0.72 | 0.0 | 0.05 | 17.63 | 0.01 | 2.225 | 19.40 | 0.00 | 6.8 | 93.2 | 0.0 | -1.57 | 2.76 | 0.32 | 0.57 | 0.80 | 3043 | 339 | 3 | 11 | 2 | 0 | 0 | logfile |
✔ | 6ZD0 | 11172 | 2023-11-14 | 2020-06-13 | 4.6 | 4.62 | 2.80 | 3.7 | 0.004 | 0.91 | 0.0 | 0.05 | 7.55 | 0.00 | 2.207 | 10.05 | 0.00 | 10.1 | 89.8 | 0.1 | -4.73 | 0.59 | 0.58 | — | 4.5 | 0.003 | 0.78 | 0.0 | 0.04 | 5.38 | 0.00 | 2.341 | 5.89 | 0.00 | 15.0 | 84.6 | 0.4 | -4.68 | 2.32 | 0.61 | 0.58 | — | 7962 | 1611 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5Li4 | 4052 | 2023-11-17 | 2016-07-14 | 4.2 | 5.13 | — | 4.0 | 0.053 | 3.07 | 114.0 | 0.34 | 14.44 | 0.02 | 0.111 | 93.07 | 2.94 | 14.0 | 79.1 | 6.9 | -4.32 | 0.24 | 0.30 | — | 4.1 | 0.004 | 1.04 | 0.0 | 0.05 | 13.71 | 0.01 | 1.950 | 32.75 | 0.09 | 15.2 | 83.8 | 1.0 | -3.85 | 4.19 | 0.34 | 0.58 | — | 20070 | 2562 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BZX | 30262 | 2023-11-13 | 2020-04-28 | 4.0 | 4.19 | — | 3.2 | 0.019 | 2.22 | 9.0 | 0.12 | 8.56 | 0.01 | 2.485 | 2.40 | 0.00 | 6.6 | 92.1 | 1.3 | -2.90 | 0.47 | 0.25 | — | 2.8 | 0.006 | 1.18 | 0.0 | 0.05 | 9.20 | 0.01 | 2.035 | 27.91 | 0.00 | 24.1 | 75.8 | 0.1 | -4.93 | 2.97 | 0.75 | 0.58 | — | 5652 | 1154 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CTJ | 26992 | 2023-11-13 | 2022-05-15 | 4.74 | 4.27 | 4.78 | 5.3 | 0.005 | 0.92 | 0.0 | 0.05 | 13.47 | 0.01 | 2.233 | 6.13 | 0.00 | 4.6 | 95.4 | 0.0 | -0.72 | 0.43 | 0.48 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.04 | 13.84 | 0.00 | 2.095 | 14.04 | 0.00 | 5.1 | 94.9 | 0.0 | -0.14 | 1.80 | 0.49 | 0.58 | — | 3312 | 401 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6KRD | 0756 | 2023-11-14 | 2019-08-21 | 4.38 | 4.25 | — | 4.4 | 0.001 | 0.39 | 0.0 | 0.04 | 7.15 | 0.00 | 2.226 | 5.80 | 0.00 | 4.5 | 95.5 | 0.1 | -3.58 | 0.57 | 0.52 | — | 4.3 | 0.003 | 0.67 | 0.0 | 0.04 | 11.93 | 0.00 | 2.014 | 12.31 | 0.01 | 3.2 | 96.7 | 0.1 | 0.08 | 1.78 | 0.62 | 0.58 | — | 61005 | 8006 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q2J | 20572 | 2023-11-16 | 2019-08-08 | 4.1 | 4.32 | — | 4.1 | 0.006 | 0.98 | 0.0 | 0.06 | 8.67 | 0.01 | 1.677 | 4.24 | 0.13 | 5.0 | 94.8 | 0.1 | -3.22 | 0.52 | 0.28 | — | 4.2 | 0.003 | 0.79 | 0.0 | 0.05 | 12.08 | 0.00 | 2.100 | 11.28 | 0.00 | 5.5 | 94.5 | 0.0 | -1.64 | 2.03 | 0.68 | 0.58 | — | 13796 | 1738 | 8 | 0 | 22 | 0 | 0 | logfile |
✔ | 6Q2N | 20575 | 2023-11-15 | 2019-08-08 | 4.4 | 4.43 | — | 4.3 | 0.008 | 1.24 | 0.0 | 0.06 | 9.78 | 0.01 | 1.449 | 11.01 | 0.68 | 9.6 | 90.2 | 0.2 | -4.25 | 0.60 | 0.56 | — | 4.3 | 0.004 | 0.81 | 0.0 | 0.05 | 11.58 | 0.01 | 2.192 | 17.37 | 0.00 | 9.9 | 90.1 | 0.0 | -2.55 | 0.96 | 0.61 | 0.58 | — | 13140 | 1678 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7BC5 | 12139 | 2023-11-13 | 2020-12-18 | 3.1 | 3.06 | 3.11 | 3.1 | 0.005 | 1.05 | 0.0 | 0.05 | 15.92 | 0.01 | 2.314 | 7.83 | 0.76 | 8.2 | 91.8 | 0.0 | -5.64 | 0.23 | 0.62 | 0.92 | 3.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.04 | 0.00 | 2.243 | 14.42 | 0.76 | 7.5 | 92.5 | 0.0 | -2.75 | 1.30 | 0.23 | 0.58 | 0.92 | 1200 | 161 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P83 | 17540 | 2023-11-21 | 2023-05-31 | 3.87 | 4.82 | 3.91 | 3.8 | 0.003 | 0.66 | 3.0 | 0.06 | 4.70 | 0.00 | 2.470 | 0.84 | 0.00 | 2.0 | 97.9 | 0.1 | 0.35 | 0.81 | 0.58 | — | 3.8 | 0.003 | 0.79 | 0.0 | 0.04 | 5.70 | 0.01 | 2.230 | 9.10 | 0.00 | 7.0 | 93.0 | 0.0 | -1.97 | 2.83 | 0.85 | 0.58 | — | 35656 | 7036 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCJ | 12268 | 2023-11-15 | 2021-01-28 | 4.23 | 3.11 | 3.97 | 4.5 | 0.011 | 1.60 | 2.0 | 0.10 | 13.68 | 0.01 | 2.444 | 0.18 | 0.76 | 7.7 | 92.0 | 0.3 | -2.36 | 0.65 | 0.46 | — | 4.5 | 0.003 | 0.60 | 1.0 | 0.05 | 13.98 | 0.00 | 1.897 | 13.84 | 0.00 | 11.2 | 88.8 | 0.0 | -2.88 | 1.39 | 0.69 | 0.58 | — | 10860 | 774 | 12 | 0 | 0 | 0 | 5586 | logfile |
✔ | 7D7R | 30610 | 2023-11-14 | 2020-10-05 | 4.0 | 4.04 | — | 4.0 | 0.004 | 0.96 | 0.0 | 0.05 | 14.87 | 0.01 | 2.270 | 5.25 | 0.36 | 3.6 | 96.2 | 0.2 | -3.66 | 0.51 | 0.58 | — | 3.9 | 0.003 | 0.85 | 0.0 | 0.04 | 15.86 | 0.00 | 2.198 | 16.53 | 0.91 | 3.4 | 96.6 | 0.0 | 0.50 | 1.32 | 0.50 | 0.58 | — | 7680 | 1160 | 2 | 0 | 0 | 0 | 0 | logfile |