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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5A6F | 3063 | 2023-04-21 | 2015-06-25 | 4.2 | 5.75 | — | 5.0 | 0.012 | 1.50 | 0.0 | 0.05 | 12.32 | 0.01 | 2.112 | 10.08 | 3.74 | 12.2 | 87.6 | 0.2 | -4.94 | 0.56 | 0.74 | — | 4.9 | 0.002 | 0.56 | 0.0 | 0.04 | 10.89 | 0.00 | 2.048 | 8.96 | 0.00 | 4.7 | 95.3 | 0.0 | -0.78 | 0.97 | 0.57 | 0.75 | — | 8881 | 540 | 2 | 0 | 43 | 0 | 4330 | logfile |
✔ | 7UPi | 26667 | 2023-04-20 | 2022-04-15 | 2.89 | 3.71 | 2.90 | 3.2 | 0.002 | 0.55 | 0.0 | 0.04 | 9.09 | 0.00 | 1.843 | 2.56 | 0.00 | 1.9 | 98.1 | 0.0 | -0.12 | 0.91 | 0.87 | 3.97 | 3.2 | 0.002 | 0.56 | 0.0 | 0.04 | 10.89 | 0.00 | 2.006 | 4.22 | 0.11 | 2.1 | 97.9 | 0.0 | -0.22 | 2.21 | 0.90 | 0.89 | 3.98 | 7775 | 972 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 8B40 | 15835 | 2023-04-22 | 2022-09-19 | 4.6 | 4.13 | 4.51 | 3.6 | 0.002 | 0.50 | 0.0 | 0.04 | 10.45 | 0.00 | 2.149 | 11.85 | 4.31 | 4.2 | 95.7 | 0.0 | -0.38 | 0.77 | 0.69 | — | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 10.91 | 0.00 | 2.129 | 15.12 | 0.00 | 5.6 | 94.4 | 0.0 | -0.80 | 1.02 | 0.76 | 0.66 | — | 39466 | 4844 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QD2 | 4517 | 2023-04-26 | 2018-12-31 | 4.8 | 4.92 | 5.85 | 4.9 | 0.006 | 0.86 | 0.0 | 0.04 | 9.04 | 0.01 | 2.025 | 6.53 | 0.00 | 11.6 | 88.4 | 0.0 | -4.60 | 0.35 | 0.62 | — | 4.9 | 0.004 | 0.68 | 0.0 | 0.04 | 10.92 | 0.00 | 2.087 | 11.59 | 0.00 | 9.1 | 90.9 | 0.0 | -1.48 | 1.09 | 0.39 | 0.65 | — | 21746 | 1420 | 5 | 0 | 2 | 0 | 11100 | logfile |
✔ | 7WoG | 32651 | 2023-04-20 | 2022-01-21 | 4.06 | 2.95 | — | 2.0 | 0.001 | 0.41 | 0.0 | 0.04 | 8.09 | 0.00 | 2.293 | 10.22 | 3.78 | 8.0 | 92.0 | 0.0 | -3.98 | 0.51 | 0.51 | — | 2.2 | 0.003 | 0.71 | 0.0 | 0.04 | 10.94 | 0.00 | 2.020 | 21.35 | 0.00 | 13.1 | 86.9 | 0.0 | -2.59 | 1.02 | 0.54 | 0.55 | — | 3362 | 433 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T8C | 25744 | 2023-04-28 | 2021-12-16 | 4.5 | 3.21 | 4.51 | 4.6 | 0.001 | 0.42 | 0.0 | 0.04 | 7.59 | 0.00 | 2.347 | 5.08 | 0.41 | 3.6 | 96.4 | 0.0 | 0.76 | 0.63 | 0.54 | — | 4.2 | 0.002 | 0.64 | 0.0 | 0.04 | 10.96 | 0.00 | 2.130 | 11.08 | 0.00 | 4.6 | 95.4 | 0.0 | 0.62 | 1.08 | 0.66 | 0.61 | — | 28952 | 3626 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MVV | 24057 | 2023-04-27 | 2021-05-15 | 3.22 | 4.20 | 3.24 | 3.5 | 0.002 | 0.36 | 0.0 | 0.03 | 6.43 | 0.00 | 2.161 | 3.07 | 0.07 | 1.3 | 98.7 | 0.0 | -0.66 | 0.88 | 0.76 | 0.50 | 3.6 | 0.002 | 0.53 | 0.0 | 0.03 | 10.98 | 0.00 | 2.021 | 7.18 | 0.07 | 3.0 | 97.0 | 0.0 | 2.84 | 0.96 | 0.89 | 0.82 | 1.13 | 25764 | 1609 | 4 | 0 | 0 | 0 | 12907 | logfile |
✔ | 6UP7 | 20836 | 2023-04-20 | 2019-10-16 | 4.2 | 4.33 | — | 4.2 | 0.008 | 1.08 | 0.0 | 0.06 | 10.36 | 0.01 | 2.216 | 9.73 | 0.00 | 13.2 | 86.8 | 0.0 | -5.14 | 0.79 | 0.80 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 11.00 | 0.00 | 2.199 | 10.15 | 0.00 | 9.4 | 90.6 | 0.0 | -1.48 | 1.20 | 0.78 | 0.79 | — | 4166 | 676 | 5 | 0 | 10 | 0 | 0 | logfile |
✔ | 5VoT | 8721 | 2023-04-24 | 2017-05-03 | 4.9 | 4.98 | — | 4.9 | 0.004 | 0.67 | 0.0 | 0.04 | 7.57 | 0.00 | 2.126 | 11.91 | 0.00 | 8.5 | 91.5 | 0.0 | -4.03 | 0.63 | 0.71 | — | 4.9 | 0.003 | 0.69 | 0.0 | 0.04 | 11.01 | 0.00 | 2.137 | 14.03 | 0.00 | 6.3 | 93.7 | 0.0 | 0.08 | 0.85 | 0.65 | 0.80 | — | 16463 | 2322 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R9o | 24330 | 2023-04-20 | 2021-06-29 | 4.0 | 4.66 | — | 4.0 | 0.002 | 0.38 | 0.0 | 0.04 | 4.49 | 0.00 | 2.252 | 2.85 | 0.25 | 10.5 | 88.7 | 0.8 | -4.93 | 0.83 | 0.71 | — | 4.0 | 0.003 | 0.60 | 0.0 | 0.04 | 11.04 | 0.00 | 1.937 | 11.65 | 0.00 | 4.2 | 95.8 | 0.0 | -0.51 | 3.45 | 0.88 | 0.83 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 6CS2 | 7582 | 2023-04-28 | 2018-03-19 | 4.4 | 4.80 | 4.54 | 4.3 | 0.007 | 0.97 | 0.0 | 0.06 | 9.05 | 0.01 | 1.972 | 7.62 | 0.24 | 7.0 | 92.9 | 0.1 | -3.98 | 0.85 | 0.82 | — | 4.3 | 0.003 | 0.70 | 0.0 | 0.04 | 11.05 | 0.00 | 2.054 | 13.89 | 0.00 | 5.7 | 94.3 | 0.0 | -1.59 | 1.23 | 0.85 | 0.83 | — | 27858 | 3404 | 34 | 0 | 91 | 0 | 0 | logfile |
✔ | 6QD0 | 4515 | 2023-04-26 | 2018-12-31 | 4.5 | 4.65 | 5.24 | 4.6 | 0.009 | 1.03 | 0.0 | 0.05 | 9.68 | 0.01 | 2.001 | 9.56 | 0.00 | 14.2 | 85.8 | 0.0 | -4.94 | 0.56 | 0.71 | — | 4.6 | 0.004 | 0.70 | 0.0 | 0.04 | 11.08 | 0.01 | 1.881 | 15.41 | 0.00 | 9.8 | 90.2 | 0.0 | -1.77 | 1.19 | 0.56 | 0.72 | — | 21746 | 1420 | 5 | 0 | 2 | 0 | 11100 | logfile |
✔ | 7NXD | 12637 | 2023-04-22 | 2021-03-18 | 4.6 | 8.22 | 6.02 | 6.0 | 0.013 | 1.51 | 0.0 | 0.11 | 9.25 | 0.03 | 1.831 | 64.77 | 1.03 | 4.0 | 96.0 | 0.1 | -1.02 | 0.80 | 0.44 | — | 6.0 | 0.005 | 0.89 | 0.0 | 0.05 | 11.12 | 0.01 | 1.813 | 36.75 | 0.00 | 7.8 | 92.2 | 0.0 | -1.51 | 1.55 | 0.90 | 0.73 | — | 12805 | 1595 | 18 | 0 | 48 | 0 | 0 | logfile |
✔ | 7CZ6 | 30507 | 2023-04-20 | 2020-09-07 | 4.1 | 4.04 | — | 4.1 | 0.009 | 1.62 | 0.0 | 0.05 | 8.57 | 0.01 | 1.047 | 61.25 | 0.00 | 8.1 | 91.9 | 0.0 | -1.66 | 0.68 | 0.64 | — | 4.1 | 0.004 | 0.84 | 0.0 | 0.05 | 11.13 | 0.01 | 2.108 | 15.25 | 0.00 | 5.5 | 94.5 | 0.0 | -2.13 | 0.91 | 0.65 | 0.72 | — | 4535 | 630 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FiK | 31600 | 2023-04-23 | 2021-07-31 | 3.7 | 3.41 | — | 2.2 | 0.007 | 0.98 | 1.0 | 0.05 | 9.93 | 0.00 | 1.868 | 3.44 | 3.73 | 6.0 | 93.8 | 0.2 | -2.13 | 0.50 | 0.52 | 1.35 | 2.2 | 0.002 | 0.60 | 0.0 | 0.04 | 11.18 | 0.00 | 2.017 | 5.54 | 0.21 | 3.9 | 96.1 | 0.0 | 1.53 | 0.65 | 0.60 | 0.69 | 1.62 | 116163 | 19039 | 32 | 0 | 722 | 0 | 0 | logfile |
✔ | 6CEB | 7463 | 2023-04-22 | 2018-02-11 | 4.7 | 5.92 | — | 4.7 | 0.006 | 1.02 | 0.0 | 0.06 | 9.64 | 0.01 | 1.288 | 8.80 | 0.00 | 11.8 | 88.0 | 0.2 | -3.39 | 0.88 | 0.82 | — | 4.7 | 0.005 | 0.81 | 0.0 | 0.05 | 11.21 | 0.00 | 2.127 | 25.98 | 0.00 | 12.8 | 87.2 | 0.0 | -2.59 | 2.07 | 0.89 | 0.85 | — | 11722 | 1406 | 20 | 0 | 30 | 0 | 0 | logfile |
✔ | 6XGC | 22180 | 2023-04-24 | 2020-06-17 | 4.1 | 4.25 | — | 4.2 | 0.002 | 0.43 | 0.0 | 0.04 | 7.79 | 0.00 | 2.215 | 5.83 | 0.16 | 2.3 | 97.7 | 0.0 | 1.43 | 0.80 | 0.81 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 11.21 | 0.00 | 2.197 | 11.45 | 0.05 | 3.6 | 96.4 | 0.0 | 0.02 | 1.31 | 0.82 | 0.83 | — | 17040 | 2157 | 21 | 0 | 21 | 0 | 0 | logfile |
✔ | 7EoQ | 31227 | 2023-04-27 | 2021-04-22 | 4.1 | 4.43 | — | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 10.23 | 0.00 | 2.195 | 7.68 | 2.14 | 4.7 | 95.3 | 0.0 | 0.09 | 0.86 | 0.74 | — | 4.1 | 0.002 | 0.58 | 0.0 | 0.04 | 11.24 | 0.00 | 2.184 | 12.47 | 0.00 | 6.4 | 93.6 | 0.0 | -0.51 | 1.21 | 0.88 | 0.78 | — | 24742 | 3144 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7T54 | 25694 | 2023-04-20 | 2021-12-11 | 4.5 | 7.46 | 4.54 | 4.6 | 0.004 | 0.70 | 1.0 | 0.05 | 10.84 | 0.00 | 2.078 | 8.94 | 0.68 | 4.4 | 95.5 | 0.1 | 0.70 | 0.62 | 0.64 | — | 4.6 | 0.005 | 0.74 | 0.0 | 0.04 | 11.24 | 0.00 | 2.155 | 18.95 | 0.00 | 9.4 | 90.3 | 0.3 | -0.60 | 1.60 | 0.70 | 0.81 | — | 8552 | 1416 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7SB5 | 24970 | 2023-04-29 | 2021-09-23 | 4.2 | 4.53 | 4.05 | 4.2 | 0.021 | 1.77 | 8.0 | 0.11 | 10.00 | 0.01 | 2.138 | 1.99 | 0.00 | 2.2 | 97.8 | 0.0 | 0.57 | 0.86 | 0.85 | — | 4.2 | 0.003 | 0.59 | 0.0 | 0.04 | 11.25 | 0.00 | 2.160 | 7.15 | 0.00 | 2.9 | 97.1 | 0.0 | 0.47 | 0.58 | 0.86 | 0.87 | — | 29457 | 3550 | 19 | 0 | 263 | 0 | 0 | logfile |