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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Y41 | 33599 | 2024-03-20 | 2022-06-13 | 4.1 | 4.02 | 3.07 | 3.4 | 0.004 | 0.63 | 0.0 | 0.03 | 24.41 | 0.01 | 1.204 | 15.20 | 0.00 | 4.4 | 95.6 | 0.0 | -0.39 | 0.87 | 0.86 | — | 3.4 | 0.005 | 0.63 | 0.0 | 0.04 | 23.73 | 0.00 | 1.023 | 14.66 | 0.04 | 4.8 | 95.2 | 0.0 | -0.45 | 1.47 | 0.88 | 0.87 | — | 97056 | 3529 | 46 | 3237 | 411 | 0 | 0 | logfile |
✘ | 7JRP | 22448 | 2024-03-25 | 2020-08-12 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 45166 | 5472 | 46 | 0 | 57 | 0 | 0 | logfile |
✔ | 6ZiY | 11231 | 2024-03-23 | 2020-06-26 | 4.25 | 4.27 | — | 4.2 | 0.021 | 2.37 | 37.0 | 1.39 | 16.06 | 0.02 | 1.919 | 1.33 | 3.34 | 9.9 | 86.7 | 3.4 | -4.76 | 0.54 | 0.76 | — | 4.2 | 0.012 | 2.28 | 0.0 | 0.44 | 14.42 | 0.00 | 2.130 | 12.38 | 0.00 | 5.1 | 94.7 | 0.2 | -0.26 | 1.07 | 0.55 | 0.78 | — | 36101 | 4646 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 6oEH | 20020 | 2024-03-22 | 2019-03-27 | 3.8 | 3.93 | — | 3.7 | 0.010 | 1.38 | 0.0 | 0.07 | 11.62 | 0.01 | 2.381 | 2.81 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.38 | 0.77 | — | 3.7 | 0.007 | 1.05 | 0.0 | 0.04 | 5.09 | 0.00 | 2.203 | 12.28 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.52 | 0.40 | 0.80 | — | 32900 | 0 | 14 | 0 | 6580 | 0 | 0 | logfile |
✔ | 8CHF | 16660 | 2024-03-15 | 2023-02-07 | 4.25 | 2.79 | 4.08 | 1.9 | 0.006 | 0.81 | 0.0 | 0.05 | 14.54 | 0.00 | 2.136 | 23.74 | 0.00 | 4.9 | 95.1 | 0.0 | -0.37 | 0.69 | 0.68 | — | 1.9 | 0.003 | 0.70 | 0.0 | 0.04 | 13.64 | 0.00 | 2.154 | 20.31 | 0.00 | 3.6 | 96.4 | 0.0 | -0.08 | 1.48 | 0.67 | 0.69 | — | 12628 | 1572 | 8 | 0 | 2 | 0 | 0 | logfile |
✘ | 7PiN | 13444 | 2024-03-28 | 2021-08-22 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 152240 | 14846 | 170 | 0 | 721 | 0 | 0 | logfile |
✔ | 6RES | 4855 | 2024-03-10 | 2019-04-12 | 4.3 | 4.30 | — | 4.2 | 0.006 | 0.95 | 0.0 | 0.06 | 15.08 | 0.01 | 1.680 | 8.22 | 0.41 | 6.0 | 93.9 | 0.1 | -5.14 | 0.64 | 0.77 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 14.32 | 0.00 | 1.912 | 14.89 | 0.02 | 5.2 | 94.7 | 0.1 | -0.99 | 1.24 | 0.64 | 0.77 | — | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 7WKK | 32566 | 2024-03-19 | 2022-01-10 | 4.2 | 4.30 | — | 3.9 | 0.006 | 0.63 | 0.0 | 0.04 | 4.94 | 0.00 | 2.138 | 2.83 | 0.00 | 4.7 | 95.2 | 0.1 | -2.36 | 0.46 | 0.60 | — | 3.8 | 0.005 | 0.74 | 0.0 | 0.04 | 5.51 | 0.00 | 2.124 | 3.84 | 0.00 | 9.6 | 90.4 | 0.0 | -0.97 | 0.64 | 0.52 | 0.69 | — | 92821 | 18728 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HJR | 0237 | 2024-03-15 | 2018-09-04 | 4.2 | 4.57 | 4.24 | 4.3 | 0.009 | 1.13 | 0.0 | 0.07 | 13.66 | 0.01 | 2.200 | 6.58 | 0.70 | 10.6 | 89.2 | 0.2 | -3.38 | 0.84 | 0.88 | — | 4.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.31 | 0.00 | 2.052 | 14.59 | 0.00 | 11.3 | 88.6 | 0.1 | -1.42 | 0.59 | 0.84 | 0.88 | — | 12579 | 1578 | 19 | 0 | 31 | 0 | 0 | logfile |
✘ | 7UT6 | 26756 | 2024-03-17 | 2022-04-26 | 1.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✔ | 6ZPo | 11342 | 2024-03-17 | 2020-07-09 | 4.0 | 3.38 | — | 3.3 | 0.007 | 0.82 | 0.0 | 0.04 | 15.82 | 0.00 | 1.497 | 10.46 | 0.00 | 6.0 | 94.0 | 0.0 | -0.81 | 0.67 | 0.76 | — | 3.3 | 0.004 | 0.56 | 0.0 | 0.04 | 16.33 | 0.00 | 1.734 | 8.31 | 0.98 | 4.6 | 95.4 | 0.0 | 0.39 | 1.12 | 0.66 | 0.75 | — | 80353 | 5150 | 42 | 0 | 16 | 17 | 40405 | logfile |
✔ | 7E81 | 31007 | 2024-03-11 | 2021-02-28 | 4.5 | 6.05 | — | 4.7 | 0.007 | 0.83 | 12.0 | 0.05 | 13.14 | 0.00 | 2.027 | 10.57 | 2.21 | 6.7 | 92.7 | 0.6 | -3.63 | 0.65 | 0.66 | — | 4.6 | 0.004 | 0.73 | 0.0 | 0.04 | 12.93 | 0.00 | 2.065 | 23.60 | 0.00 | 3.0 | 97.0 | 0.0 | -0.41 | 1.87 | 0.71 | 0.85 | — | 57178 | 7397 | 68 | 0 | 154 | 0 | 0 | logfile |
✔ | 7ZK9 | 14759 | 2024-03-14 | 2022-04-12 | 4.3 | 4.49 | 4.46 | 4.4 | 0.009 | 1.00 | 0.0 | 0.06 | 13.59 | 0.00 | 2.255 | 15.76 | 0.74 | 5.3 | 94.6 | 0.1 | -0.05 | 0.62 | 0.77 | — | 4.3 | 0.003 | 0.62 | 0.0 | 0.04 | 13.80 | 0.00 | 2.209 | 15.26 | 0.00 | 4.9 | 95.1 | 0.0 | 0.23 | 0.58 | 0.62 | 0.78 | — | 8999 | 1157 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7ZKB | 14761 | 2024-03-14 | 2022-04-12 | 4.7 | 4.80 | 4.47 | 4.7 | 0.008 | 1.05 | 2.0 | 0.06 | 15.45 | 0.00 | 2.224 | 16.22 | 0.21 | 6.9 | 93.1 | 0.0 | 0.07 | 0.56 | 0.74 | — | 4.7 | 0.004 | 0.68 | 0.0 | 0.04 | 14.98 | 0.00 | 2.122 | 14.62 | 0.00 | 7.0 | 93.0 | 0.0 | 0.01 | 0.55 | 0.56 | 0.76 | — | 9043 | 1158 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6X34 | 22017 | 2024-03-20 | 2020-05-21 | 4.7 | 6.14 | 4.99 | 4.8 | 0.001 | 0.41 | 0.0 | 0.03 | 9.38 | 0.00 | 2.258 | 3.80 | 0.61 | 1.6 | 98.4 | 0.0 | -2.99 | 0.74 | 0.66 | — | 4.8 | 0.004 | 0.68 | 0.0 | 0.04 | 9.64 | 0.00 | 2.092 | 16.08 | 0.00 | 5.3 | 94.7 | 0.0 | 0.02 | 0.92 | 0.80 | 0.80 | — | 97888 | 13956 | 12 | 0 | 1320 | 0 | 0 | logfile |
✔ | 6ZQN | 11369 | 2024-03-17 | 2020-07-10 | 4.0 | 3.59 | — | 3.5 | 0.008 | 0.86 | 0.0 | 0.05 | 15.43 | 0.00 | 1.537 | 13.57 | 0.02 | 8.6 | 91.4 | 0.0 | -1.45 | 0.69 | 0.77 | — | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 15.77 | 0.00 | 1.768 | 9.73 | 0.67 | 4.1 | 95.9 | 0.0 | -0.05 | 0.37 | 0.68 | 0.77 | — | 80631 | 5165 | 42 | 0 | 16 | 17 | 40551 | logfile |
✔ | 6QC4 | 4496 | 2024-03-20 | 2018-12-26 | 4.6 | 4.73 | 4.64 | 4.6 | 0.006 | 1.11 | 0.0 | 0.85 | 11.13 | 0.01 | 1.949 | 7.33 | 0.38 | 10.8 | 89.0 | 0.1 | -3.76 | 0.73 | 0.75 | — | 4.6 | 0.008 | 1.47 | 0.0 | 0.26 | 12.88 | 0.01 | 1.806 | 20.64 | 0.04 | 10.1 | 89.8 | 0.0 | -1.08 | 2.19 | 0.75 | 0.79 | — | 96705 | 12008 | 81 | 0 | 85 | 0 | 0 | logfile |
✔ | 6oEF | 20020 | 2024-03-25 | 2019-03-27 | 3.8 | 3.98 | — | 3.8 | 0.007 | 1.67 | 0.0 | 0.07 | 11.76 | 0.01 | 2.376 | 3.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.47 | 0.78 | — | 3.8 | 0.006 | 1.21 | 0.0 | 0.05 | 6.00 | 0.00 | 2.197 | 8.15 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.49 | 0.80 | — | 51240 | 0 | 14 | 0 | 10248 | 0 | 0 | logfile |
✔ | 7YN0 | 33949 | 2024-03-20 | 2022-07-29 | 4.1 | 4.36 | 4.06 | 4.2 | 0.005 | 0.83 | 6.0 | 0.06 | 18.73 | 0.01 | 2.218 | 5.68 | 0.30 | 5.1 | 94.7 | 0.2 | -0.74 | 0.84 | 0.79 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 15.42 | 0.00 | 2.100 | 12.70 | 0.00 | 6.2 | 93.8 | 0.0 | -0.61 | 1.61 | 0.85 | 0.81 | — | 27912 | 3498 | 21 | 0 | 63 | 0 | 0 | logfile |
✘ | 7RiG | 24479 | 2024-03-22 | 2021-07-19 | 2.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32804 | 4128 | 12 | 0 | 22 | 278 | 0 | logfile |