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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DR4 | 27670 | 2024-04-17 | 2022-07-20 | 2.45 | 3.17 | 2.59 | 3.0 | 0.008 | 0.56 | 0.0 | 0.04 | 18.58 | 0.00 | 1.929 | 2.78 | 0.91 | 1.9 | 98.1 | 0.0 | 1.85 | 0.84 | 0.85 | 3.40 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 18.24 | 0.00 | 1.905 | 3.65 | 1.39 | 2.2 | 97.8 | 0.0 | 1.70 | 0.66 | 0.76 | 0.86 | 3.51 | 43471 | 2600 | 17 | 63 | 8 | 0 | 21549 | logfile |
✔ | 7TFE | 25871 | 2024-04-17 | 2022-01-06 | 2.85 | 3.19 | — | 3.2 | 0.004 | 0.68 | 0.0 | 0.05 | 14.58 | 0.00 | 2.083 | 8.48 | 2.18 | 4.8 | 95.2 | 0.0 | 0.27 | 0.50 | 0.67 | 3.07 | 3.2 | 0.005 | 0.92 | 7.0 | 0.05 | 16.34 | 0.00 | 2.044 | 10.10 | 2.27 | 4.3 | 95.7 | 0.0 | 0.43 | 1.03 | 0.71 | 0.83 | 3.41 | 41388 | 5316 | 24 | 0 | 24 | 0 | 0 | logfile |
✘ | 7KW7 | 23050 | 2024-04-17 | 2020-11-30 | 3.57 | 4.37 | 3.64 | 3.7 | 0.021 | 1.73 | 0.0 | 0.10 | 11.04 | 0.01 | 1.517 | 0.96 | 0.00 | 1.3 | 98.7 | 0.0 | 0.61 | 0.86 | 0.74 | 1.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43780 | 2727 | 8 | 0 | 6 | 0 | 21928 | logfile |
✘ | 7oJ0 | 12937 | 2024-04-17 | 2021-05-13 | 3.5 | 3.49 | — | 3.3 | 0.006 | 0.84 | 1.0 | 0.04 | 22.62 | 0.02 | 1.995 | 7.15 | 0.16 | 4.4 | 95.5 | 0.1 | -1.32 | 0.87 | 0.88 | 2.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 146507 | 6266 | 66 | 4525 | 310 | 0 | 0 | logfile |
✔ | 7Z1L | 14447 | 2024-04-17 | 2022-02-24 | 2.8 | 2.35 | 2.84 | 2.2 | 0.003 | 0.65 | 0.0 | 0.05 | 13.55 | 0.00 | 2.079 | 4.15 | 0.02 | 2.8 | 97.2 | 0.0 | -0.22 | 0.83 | 0.81 | 3.45 | 2.2 | 0.010 | 0.60 | 0.0 | 0.05 | 15.66 | 0.00 | 1.964 | 6.63 | 1.56 | 3.2 | 96.8 | 0.0 | 0.38 | 0.29 | 0.84 | 0.83 | 3.27 | 42330 | 5156 | 26 | 63 | 10 | 0 | 0 | logfile |
✔ | 7S4K | 24829 | 2024-04-17 | 2021-09-09 | 2.36 | 2.82 | — | 2.6 | 0.009 | 1.05 | 3.0 | 0.05 | 22.37 | 0.00 | 1.448 | 13.70 | 3.29 | 5.4 | 94.4 | 0.2 | 0.71 | 0.74 | 0.82 | 4.62 | 2.6 | 0.004 | 0.74 | 1.0 | 0.05 | 19.44 | 0.00 | 2.006 | 8.48 | 2.24 | 4.6 | 95.2 | 0.2 | 1.02 | 0.57 | 0.78 | 0.91 | 4.69 | 22589 | 2577 | 27 | 0 | 63 | 110 | 0 | logfile |
✔ | 7AE3 | 11738 | 2024-04-17 | 2020-09-17 | 3.1 | 3.92 | 3.23 | 3.0 | 0.008 | 0.97 | 1.0 | 0.06 | 11.23 | 0.01 | 1.688 | 3.45 | 0.37 | 4.2 | 95.7 | 0.1 | -4.00 | 0.85 | 0.76 | 1.37 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 13.79 | 0.00 | 1.962 | 9.22 | 1.56 | 3.7 | 96.3 | 0.0 | 0.01 | 1.57 | 0.89 | 0.86 | 2.28 | 42525 | 5232 | 27 | 44 | 9 | 0 | 0 | logfile |
✘ | 7ToS | 26037 | 2024-04-17 | 2022-01-24 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✔ | 6UiX | 20790 | 2024-04-17 | 2019-10-01 | 3.5 | 4.38 | — | 3.7 | 0.009 | 0.96 | 0.0 | 0.05 | 13.69 | 0.01 | 2.204 | 8.14 | 0.00 | 4.0 | 96.0 | 0.0 | -3.80 | 0.68 | 0.83 | 1.92 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 14.61 | 0.00 | 2.269 | 12.16 | 1.90 | 2.8 | 97.2 | 0.0 | 2.59 | 1.51 | 0.68 | 0.83 | 1.83 | 44198 | 6050 | 22 | 0 | 0 | 0 | 0 | logfile |
✘ | 7S4H | 24826 | 2024-04-17 | 2021-09-08 | 2.14 | 2.27 | — | 2.3 | 0.009 | 1.03 | 3.0 | 0.05 | 22.83 | 0.00 | 1.502 | 14.45 | 2.83 | 4.8 | 94.9 | 0.2 | 0.71 | 0.77 | 0.85 | 4.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22889 | 2577 | 27 | 0 | 63 | 410 | 0 | logfile |
✔ | 7L02 | 23094 | 2024-04-17 | 2020-12-10 | 3.2 | 3.91 | — | 3.7 | 0.015 | 1.55 | 4.0 | 0.10 | 13.23 | 0.01 | 2.370 | 1.29 | 0.70 | 3.3 | 96.7 | 0.0 | -0.25 | 0.80 | 0.74 | 2.04 | 3.7 | 0.004 | 0.62 | 0.0 | 0.04 | 13.45 | 0.00 | 1.894 | 25.17 | 1.06 | 5.4 | 94.6 | 0.0 | -0.39 | 0.90 | 0.83 | 0.80 | 2.19 | 44110 | 3776 | 23 | 0 | 69 | 0 | 13841 | logfile |
✘ | 7SSN | 25410 | 2024-04-17 | 2021-11-11 | 3.2 | 3.58 | 3.37 | 3.3 | 0.007 | 0.83 | 0.0 | 0.04 | 23.48 | 0.01 | 2.222 | 5.45 | 0.61 | 9.3 | 90.5 | 0.1 | -5.01 | 0.83 | 0.84 | 1.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 145435 | 5602 | 54 | 4735 | 0 | 0 | 0 | logfile |
✘ | 6H05 | 0108 | 2024-04-17 | 2018-07-06 | 2.9 | 3.15 | — | 3.5 | 0.016 | 1.09 | 0.0 | 0.07 | 9.74 | 0.01 | 0.426 | 17.80 | 0.00 | 8.5 | 91.5 | 0.0 | -5.50 | 0.36 | 0.13 | 0.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44544 | 5664 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RDX | 24426 | 2024-04-17 | 2021-07-12 | 3.1 | 3.69 | — | 3.6 | 0.006 | 0.64 | 0.0 | 0.05 | 16.42 | 0.00 | 1.919 | 7.40 | 0.00 | 6.3 | 93.7 | 0.0 | -1.43 | 0.77 | 0.81 | 2.79 | 3.6 | 0.004 | 0.55 | 0.0 | 0.04 | 15.87 | 0.00 | 1.698 | 7.42 | 0.32 | 7.2 | 92.8 | 0.0 | -1.19 | 0.33 | 0.78 | 0.83 | 2.64 | 42324 | 2553 | 11 | 80 | 19 | 0 | 20496 | logfile |
✔ | 5FYW | 3378 | 2024-04-17 | 2016-03-10 | 4.35 | 4.82 | — | 4.3 | 0.010 | 1.14 | 2.0 | 0.07 | 12.92 | 0.01 | 0.245 | 17.00 | 0.77 | 5.4 | 94.1 | 0.5 | -2.84 | 0.80 | 0.75 | — | 4.3 | 0.005 | 0.75 | 0.0 | 0.04 | 14.52 | 0.00 | 1.914 | 20.04 | 0.02 | 6.3 | 93.5 | 0.2 | 0.22 | 2.89 | 0.83 | 0.81 | — | 41710 | 5176 | 30 | 94 | 11 | 0 | 0 | logfile |
✘ | 7WTM | 32791 | 2024-04-17 | 2022-02-05 | 3.5 | 3.32 | — | 3.2 | 0.006 | 0.89 | 0.0 | 0.05 | 21.84 | 0.01 | 2.110 | 6.36 | 0.00 | 7.6 | 92.4 | 0.1 | -1.86 | 0.80 | 0.78 | 2.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44623 | 2651 | 18 | 1106 | 1 | 0 | 0 | logfile |
✔ | 7L09 | 23097 | 2024-04-17 | 2020-12-11 | 3.1 | 3.71 | — | 3.5 | 0.015 | 1.55 | 4.0 | 0.10 | 13.22 | 0.01 | 2.369 | 1.31 | 0.76 | 3.3 | 96.7 | 0.0 | -0.26 | 0.77 | 0.74 | 2.20 | 3.5 | 0.003 | 0.56 | 0.0 | 0.04 | 13.45 | 0.00 | 1.883 | 19.91 | 1.40 | 4.1 | 95.9 | 0.0 | 0.15 | 0.83 | 0.80 | 0.80 | 2.28 | 44124 | 3776 | 23 | 0 | 70 | 0 | 13841 | logfile |
✘ | 6XZB | 10657 | 2024-04-17 | 2020-02-03 | 2.54 | 3.99 | — | 3.8 | 0.008 | 0.64 | 1.0 | 0.04 | 23.12 | 0.02 | 0.178 | 7.02 | 2.93 | 3.1 | 96.4 | 0.4 | -1.96 | 0.75 | 0.71 | 2.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 145650 | 5732 | 55 | 4692 | 1 | 0 | 0 | logfile |
✘ | 7V5M | 31727 | 2024-04-17 | 2021-08-17 | 3.88 | 4.12 | — | 3.8 | 0.002 | 0.61 | 0.0 | 0.04 | 7.67 | 0.00 | 2.155 | 9.48 | 0.00 | 3.0 | 96.9 | 0.1 | -2.87 | 0.80 | 0.69 | 1.03 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 45340 | 6198 | 28 | 0 | 0 | 0 | 0 | logfile |
✘ | 7NKJ | 12441 | 2024-04-17 | 2021-02-18 | 2.17 | 2.16 | — | 2.1 | 0.005 | 0.59 | 0.0 | 0.05 | 17.26 | 0.00 | 1.958 | 2.88 | 1.05 | 1.8 | 98.2 | 0.1 | 1.04 | 0.80 | 0.89 | 6.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 45605 | 2945 | 20 | 0 | 11 | 516 | 22478 | logfile |