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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8PN8 | 17778 | 2024-04-15 | 2023-06-30 | 2.31 | 2.78 | 2.42 | 2.7 | 0.035 | 1.37 | 0.0 | 0.05 | 11.04 | 0.00 | 1.608 | 8.27 | 0.43 | 1.0 | 99.0 | 0.0 | 0.98 | 0.69 | 0.89 | 5.17 | 2.6 | 0.004 | 0.55 | 0.0 | 0.05 | 14.49 | 0.00 | 2.162 | 8.64 | 1.68 | 2.0 | 98.0 | 0.0 | 0.56 | 0.41 | 0.66 | 0.89 | 5.04 | 34298 | 4314 | 36 | 0 | 12 | 866 | 0 | logfile |
✘ | 8ENN | 28274 | 2024-04-09 | 2022-09-30 | 2.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16749 | 1974 | 12 | 0 | 9 | 858 | 0 | logfile |
✔ | 7R4G | 14307 | 2024-04-07 | 2022-02-08 | 2.5 | 2.48 | — | 2.5 | 0.008 | 0.81 | 0.0 | 0.86 | 16.66 | 0.01 | 1.869 | 4.23 | 0.03 | 3.2 | 96.8 | 0.0 | -0.01 | 0.70 | 0.89 | 5.55 | 2.5 | 0.007 | 1.34 | 0.0 | 0.26 | 16.58 | 0.00 | 2.137 | 5.03 | 1.17 | 2.3 | 97.7 | 0.0 | 1.33 | 0.79 | 0.70 | 0.90 | 4.75 | 65153 | 7802 | 111 | 0 | 47 | 851 | 0 | logfile |
✔ | 8GHE | 40042 | 2024-04-11 | 2023-03-09 | 2.05 | 2.65 | 2.15 | 2.5 | 0.006 | 0.73 | 0.0 | 0.05 | 12.12 | 0.01 | 2.229 | 4.10 | 0.04 | 1.7 | 98.3 | 0.0 | -0.85 | 0.83 | 0.91 | 5.79 | 2.4 | 0.003 | 0.57 | 0.0 | 0.04 | 14.38 | 0.00 | 2.068 | 9.23 | 0.61 | 1.4 | 98.6 | 0.0 | 1.73 | 0.45 | 0.82 | 0.91 | 5.43 | 22193 | 2648 | 12 | 0 | 5 | 830 | 0 | logfile |
✔ | 7XMU | 33305 | 2024-04-09 | 2022-04-26 | 2.3 | 2.51 | 2.33 | 2.5 | 0.016 | 0.90 | 0.0 | 0.05 | 17.56 | 0.04 | 1.897 | 4.23 | 1.57 | 2.6 | 97.4 | 0.0 | -0.10 | 0.75 | 0.87 | 4.86 | 2.5 | 0.003 | 1.81 | 0.0 | 0.05 | 17.20 | 0.00 | 1.868 | 4.65 | 1.18 | 2.3 | 97.7 | 0.0 | -0.04 | 1.10 | 0.77 | 0.88 | 4.72 | 15294 | 1842 | 18 | 0 | 36 | 822 | 0 | logfile |
✘ | 7XMV | 33306 | 2024-04-09 | 2022-04-27 | 2.6 | 2.75 | 2.70 | 2.8 | 0.015 | 0.96 | 0.0 | 0.05 | 15.36 | 0.04 | 1.853 | 5.34 | 1.18 | 3.6 | 96.4 | 0.0 | -0.87 | 0.72 | 0.86 | 4.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15228 | 1842 | 18 | 0 | 30 | 810 | 0 | logfile |
✔ | 8UF0 | 42181 | 2024-04-12 | 2023-10-03 | 2.02 | 2.34 | 2.08 | 2.2 | 0.007 | 0.76 | 0.0 | 0.05 | 17.50 | 0.01 | 0.013 | 4.37 | 0.54 | 1.8 | 98.2 | 0.0 | 0.09 | 0.84 | 0.89 | 5.17 | 2.2 | 0.003 | 0.62 | 0.0 | 0.05 | 17.90 | 0.01 | 2.125 | 3.00 | 1.19 | 1.1 | 98.9 | 0.0 | 1.26 | 0.34 | 0.82 | 0.88 | 4.15 | 27000 | 3456 | 48 | 0 | 0 | 804 | 0 | logfile |
✔ | 7M4V | 23667 | 2024-04-13 | 2021-03-22 | 2.54 | 2.36 | — | 2.4 | 0.006 | 0.56 | 0.0 | 0.04 | 23.15 | 0.01 | 1.808 | 2.89 | 0.00 | 2.3 | 97.6 | 0.2 | 0.82 | 0.71 | 0.79 | 4.43 | 2.4 | 0.007 | 0.95 | 0.0 | 0.05 | 23.26 | 0.01 | 1.614 | 4.01 | 2.29 | 3.2 | 96.6 | 0.2 | -0.30 | 1.72 | 0.74 | 0.87 | 4.58 | 86404 | 3128 | 48 | 2847 | 162 | 802 | 0 | logfile |
✔ | 7M4W | 23668 | 2024-04-12 | 2021-03-22 | 2.55 | 1.74 | — | 1.6 | 0.006 | 0.55 | 0.0 | 0.03 | 22.94 | 0.01 | 1.760 | 3.08 | 0.02 | 2.8 | 97.0 | 0.2 | 1.38 | 0.77 | 0.74 | 3.81 | 1.5 | 0.008 | 0.89 | 0.0 | 0.05 | 23.08 | 0.01 | 1.642 | 5.06 | 2.52 | 3.5 | 96.4 | 0.1 | 0.40 | 0.91 | 0.79 | 0.76 | 3.81 | 137923 | 5518 | 76 | 4373 | 195 | 797 | 0 | logfile |
✔ | 7o19 | 12693 | 2024-04-16 | 2021-03-29 | 2.9 | 3.19 | 2.93 | 2.6 | 0.016 | 1.84 | 0.0 | 0.05 | 22.51 | 0.02 | 1.430 | 6.55 | 0.04 | 3.7 | 96.2 | 0.1 | -1.50 | 0.82 | 0.86 | 3.50 | 2.6 | 0.003 | 0.63 | 0.0 | 0.04 | 22.35 | 0.01 | 1.805 | 7.86 | 1.87 | 3.6 | 96.3 | 0.1 | 0.09 | 0.36 | 0.85 | 0.88 | 3.30 | 145019 | 5694 | 74 | 4635 | 173 | 793 | 0 | logfile |
✔ | 7ARD | 11880 | 2024-04-10 | 2020-10-23 | 3.11 | 3.05 | — | 3.0 | 0.005 | 0.90 | 0.0 | 0.05 | 14.39 | 0.01 | 1.852 | 12.16 | 0.04 | 2.1 | 97.9 | 0.0 | 0.94 | 0.78 | 0.86 | 3.25 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 16.08 | 0.00 | 2.067 | 7.36 | 2.04 | 2.5 | 97.5 | 0.0 | 1.27 | 0.98 | 0.78 | 0.89 | 2.95 | 70559 | 8515 | 116 | 0 | 264 | 782 | 0 | logfile |
✔ | 5A1A | 2984 | 2024-04-15 | 2015-04-29 | 2.2 | 2.04 | 2.58 | 2.5 | 0.009 | 1.21 | 0.0 | 0.04 | 13.18 | 0.01 | 0.020 | 14.13 | 1.03 | 3.9 | 95.5 | 0.6 | -1.86 | 0.53 | 0.76 | 4.20 | 2.5 | 0.004 | 0.70 | 0.0 | 0.05 | 17.31 | 0.00 | 1.928 | 11.82 | 3.52 | 3.3 | 96.6 | 0.1 | -0.62 | 0.59 | 0.53 | 0.79 | 4.08 | 33696 | 4088 | 12 | 0 | 20 | 776 | 0 | logfile |
✔ | 7N8H | 24236 | 2024-04-14 | 2021-06-14 | 2.3 | 2.39 | 2.37 | 2.4 | 0.012 | 1.26 | 0.0 | 0.08 | 10.70 | 0.01 | 2.409 | 1.69 | 0.00 | 1.7 | 98.3 | 0.0 | 0.64 | 0.73 | 0.78 | 4.69 | 2.4 | 0.004 | 0.65 | 0.0 | 0.05 | 13.98 | 0.00 | 1.997 | 4.13 | 1.30 | 1.9 | 98.1 | 0.0 | 0.79 | 0.98 | 0.74 | 0.80 | 4.64 | 32921 | 4356 | 36 | 0 | 60 | 771 | 0 | logfile |
✘ | 8DBY | 27317 | 2024-04-09 | 2022-06-15 | 2.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16794 | 1998 | 12 | 0 | 8 | 770 | 0 | logfile |
✔ | 8CAD | 16524 | 2024-04-07 | 2023-01-24 | 2.85 | 2.57 | 2.81 | 2.7 | 0.003 | 0.59 | 0.0 | 0.05 | 11.54 | 0.00 | 2.115 | 5.66 | 0.00 | 1.8 | 98.2 | 0.0 | 0.82 | 0.69 | 0.81 | 3.81 | 2.6 | 0.005 | 0.62 | 0.0 | 0.04 | 14.33 | 0.00 | 1.858 | 5.16 | 2.21 | 4.4 | 95.6 | 0.0 | 0.28 | 0.62 | 0.70 | 0.85 | 4.11 | 64084 | 3816 | 30 | 0 | 78 | 766 | 31062 | logfile |
✔ | 7VB7 | 31874 | 2024-04-13 | 2021-08-30 | 2.4 | 2.41 | — | 2.4 | 0.007 | 0.77 | 1.0 | 0.05 | 16.79 | 0.01 | 1.988 | 6.35 | 1.28 | 3.0 | 96.9 | 0.1 | 0.48 | 0.76 | 0.90 | 5.52 | 2.4 | 0.004 | 0.59 | 0.0 | 0.04 | 16.83 | 0.00 | 2.093 | 4.34 | 1.58 | 3.3 | 96.7 | 0.0 | 0.61 | 0.22 | 0.77 | 0.91 | 5.45 | 29279 | 3543 | 45 | 0 | 19 | 736 | 0 | logfile |
✔ | 7VYN | 32210 | 2024-04-13 | 2021-11-14 | 2.4 | 2.47 | — | 2.5 | 0.008 | 0.78 | 1.0 | 0.05 | 17.28 | 0.01 | 2.198 | 5.50 | 1.15 | 3.5 | 96.5 | 0.1 | 0.41 | 0.77 | 0.91 | 5.04 | 2.5 | 0.003 | 0.56 | 0.0 | 0.04 | 17.16 | 0.00 | 2.153 | 4.34 | 1.38 | 3.3 | 96.6 | 0.1 | 0.82 | 0.25 | 0.76 | 0.91 | 4.99 | 29298 | 3543 | 45 | 0 | 20 | 735 | 0 | logfile |
✔ | 7VBZ | 31886 | 2024-04-13 | 2021-09-01 | 2.4 | 2.48 | — | 2.5 | 0.009 | 0.93 | 6.0 | 0.06 | 16.93 | 0.01 | 1.907 | 11.30 | 2.07 | 3.7 | 96.0 | 0.3 | -0.05 | 0.74 | 0.89 | 4.87 | 2.4 | 0.004 | 0.61 | 0.0 | 0.04 | 17.17 | 0.00 | 2.102 | 5.69 | 1.91 | 3.1 | 96.8 | 0.1 | 0.28 | 0.90 | 0.75 | 0.91 | 5.24 | 29292 | 3543 | 45 | 0 | 19 | 730 | 0 | logfile |
✔ | 8PHo | 17669 | 2024-04-14 | 2023-06-20 | 2.34 | 2.07 | 2.33 | 2.2 | 0.005 | 0.77 | 0.0 | 0.06 | 13.64 | 0.01 | 2.128 | 1.78 | 0.00 | 1.0 | 99.0 | 0.0 | -0.02 | 0.73 | 0.85 | 3.99 | 2.2 | 0.003 | 0.51 | 0.0 | 0.04 | 17.01 | 0.00 | 2.219 | 2.75 | 1.18 | 0.6 | 99.4 | 0.0 | 1.27 | 0.49 | 0.72 | 0.85 | 4.55 | 32172 | 3804 | 12 | 0 | 0 | 720 | 0 | logfile |
✘ | 7Pi5 | 13430 | 2024-04-11 | 2021-08-19 | 2.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 76287 | 7455 | 123 | 0 | 343 | 718 | 0 | logfile |