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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6oo4 | 20145 | 2024-03-17 | 2019-04-22 | 3.3 | 3.45 | 3.23 | 3.5 | 0.013 | 1.10 | 0.0 | 0.06 | 10.41 | 0.01 | 1.858 | 2.96 | 0.00 | 3.4 | 96.6 | 0.0 | -2.86 | 0.47 | 0.64 | 4.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18452 | 2440 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 6WHG | 21672 | 2024-03-17 | 2020-04-08 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17116 | 2092 | 8 | 0 | 12 | 0 | 0 | logfile |
✘ | 7PD3 | 13329 | 2024-03-10 | 2021-08-04 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 108076 | 9276 | 76 | 1522 | 125 | 0 | 0 | logfile |
✘ | 8DNC | 27563 | 2024-03-15 | 2022-07-11 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10672 | 1300 | 6 | 0 | 5 | 0 | 0 | logfile |
✘ | 7T6M | 25719 | 2024-03-18 | 2021-12-14 | 2.8 | 3.05 | — | 3.1 | 0.006 | 1.07 | 0.0 | 0.07 | 15.21 | 0.01 | 2.300 | 3.31 | 0.00 | 1.7 | 98.3 | 0.0 | -2.68 | 0.71 | 0.84 | 3.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19600 | 2424 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7TES | 25851 | 2024-03-21 | 2022-01-05 | 4.7 | 8.44 | 4.80 | 4.3 | 0.004 | 0.92 | 0.0 | 0.05 | 14.89 | 0.01 | 2.261 | 9.08 | 1.27 | 8.9 | 90.9 | 0.3 | -4.01 | 0.82 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31306 | 3986 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 7CH8 | 30371 | 2024-03-17 | 2020-07-05 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16213 | 2122 | 17 | 0 | 12 | 0 | 0 | logfile |
✘ | 4CE4 | 2490 | 2024-03-13 | 2013-11-08 | 4.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 65473 | 3572 | 40 | 1437 | 984 | 0 | 0 | logfile |
✘ | 5ZGB | 6929 | 2024-03-22 | 2018-03-08 | 3.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35011 | 3102 | 31 | 0 | 215 | 0 | 0 | logfile |
✘ | 7DXC | 30904 | 2024-03-19 | 2021-01-18 | 3.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22896 | 2808 | 8 | 0 | 20 | 0 | 0 | logfile |
✘ | 7WGV | 32490 | 2024-03-20 | 2021-12-29 | 3.2 | 3.63 | — | 3.6 | 0.017 | 1.29 | 0.0 | 0.05 | 14.42 | 0.00 | 2.151 | 5.03 | 0.00 | 3.2 | 96.8 | 0.0 | -0.59 | 0.79 | 0.83 | 3.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26931 | 3309 | 21 | 0 | 69 | 0 | 0 | logfile |
✘ | 6oo3 | 20143 | 2024-03-17 | 2019-04-22 | 2.9 | 3.02 | 2.79 | 3.0 | 0.014 | 1.22 | 0.0 | 0.06 | 10.95 | 0.01 | 2.495 | 2.15 | 0.00 | 3.1 | 96.9 | 0.0 | -2.84 | 0.68 | 0.85 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18236 | 2404 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 8F6P | 28887 | 2024-03-17 | 2022-11-16 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17507 | 1091 | 4 | 0 | 34 | 0 | 8229 | logfile |
✘ | 7BL2 | 12215 | 2024-03-19 | 2021-01-18 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8DW3 | 27750 | 2024-03-14 | 2022-07-30 | 4.26 | 4.66 | 4.43 | 4.4 | 0.013 | 0.95 | 0.0 | 0.05 | 17.59 | 0.01 | 1.895 | 15.23 | 0.10 | 5.7 | 94.2 | 0.1 | -0.89 | 0.75 | 0.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9351 | 1223 | 7 | 0 | 3 | 0 | 0 | logfile |
✘ | 6LHU | 0899 | 2024-03-19 | 2019-12-10 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23169 | 1518 | 2 | 0 | 0 | 0 | 11483 | logfile |
✘ | 7WGX | 32491 | 2024-03-19 | 2021-12-29 | 3.5 | 3.82 | — | 3.8 | 0.017 | 1.20 | 0.0 | 0.05 | 13.51 | 0.00 | 2.256 | 4.67 | 0.00 | 3.9 | 95.6 | 0.5 | -0.06 | 0.79 | 0.83 | 2.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25629 | 3165 | 21 | 0 | 60 | 0 | 0 | logfile |
✘ | 6oo5 | 20146 | 2024-03-17 | 2019-04-22 | 4.2 | 4.30 | 4.10 | 4.2 | 0.012 | 1.05 | 0.0 | 0.06 | 10.64 | 0.01 | 2.246 | 3.18 | 0.00 | 4.5 | 95.5 | 0.0 | -2.74 | 0.65 | 0.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17548 | 2440 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7BLZ | 12228 | 2024-03-15 | 2021-01-19 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 55800 | 2817 | 41 | 0 | 206 | 249 | 21916 | logfile |
✘ | 5XNL | 6741 | 2024-03-20 | 2017-05-23 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 98986 | 9364 | 136 | 0 | 490 | 1076 | 0 | logfile |