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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZLK | 14783 | 2024-04-11 | 2022-04-15 | 3.99 | 4.35 | 4.04 | 4.2 | 0.021 | 1.85 | 0.0 | 0.13 | 14.46 | 0.01 | 2.348 | 0.97 | 0.08 | 2.9 | 97.1 | 0.0 | 0.34 | 0.76 | 0.76 | 1.82 | 4.2 | 0.004 | 0.77 | 0.0 | 0.05 | 14.89 | 0.00 | 2.134 | 13.91 | 3.13 | 5.9 | 94.0 | 0.1 | -0.36 | 1.52 | 0.78 | 0.81 | 1.42 | 23518 | 2836 | 35 | 0 | 98 | 0 | 0 | logfile |
✔ | 8DCK | 27326 | 2024-04-14 | 2022-06-16 | 3.4 | 3.69 | 3.43 | 3.8 | 0.004 | 0.74 | 0.0 | 0.05 | 14.84 | 0.00 | 2.012 | 7.99 | 0.06 | 4.8 | 95.2 | 0.0 | 0.17 | 0.67 | 0.76 | 1.01 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 16.26 | 0.00 | 1.973 | 10.14 | 2.24 | 4.7 | 95.3 | 0.0 | 1.11 | 1.36 | 0.66 | 0.78 | 1.02 | 32661 | 4101 | 18 | 0 | 12 | 0 | 0 | logfile |
✔ | 7KDL | 22826 | 2024-04-11 | 2020-10-08 | 2.96 | 3.49 | — | 3.4 | 0.014 | 1.76 | 2.0 | 0.10 | 11.91 | 0.01 | 1.479 | 0.09 | 0.27 | 6.1 | 93.6 | 0.3 | -0.99 | 0.78 | 0.78 | 3.84 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 13.46 | 0.00 | 2.153 | 6.92 | 1.20 | 3.4 | 96.6 | 0.0 | 0.29 | 1.22 | 0.79 | 0.82 | 3.26 | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7JPS | 22421 | 2024-04-09 | 2020-08-09 | 4.4 | 5.22 | — | 3.8 | 0.006 | 1.19 | 1.0 | 0.06 | 16.82 | 0.01 | 2.102 | 4.24 | 0.00 | 3.1 | 96.9 | 0.0 | -2.45 | 0.67 | 0.46 | — | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 16.25 | 0.00 | 1.963 | 15.34 | 0.00 | 3.9 | 96.1 | 0.0 | 0.13 | 2.69 | 0.84 | 0.72 | — | 16352 | 1932 | 11 | 26 | 7 | 0 | 0 | logfile |
✔ | 7T32 | 25648 | 2024-04-05 | 2021-12-06 | 3.4 | 3.96 | — | 3.9 | 0.006 | 0.77 | 0.0 | 0.04 | 14.07 | 0.01 | 2.313 | 6.67 | 0.00 | 5.1 | 94.6 | 0.3 | 1.86 | 0.44 | 0.76 | 0.75 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 16.13 | 0.00 | 2.231 | 8.44 | 3.17 | 4.9 | 94.9 | 0.3 | 2.40 | 0.93 | 0.45 | 0.80 | 0.68 | 2861 | 375 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KE4 | 22831 | 2024-04-11 | 2020-10-10 | 3.21 | 3.83 | — | 3.6 | 0.014 | 1.78 | 8.0 | 0.10 | 13.37 | 0.01 | 2.519 | 0.15 | 1.06 | 6.7 | 92.9 | 0.4 | -1.54 | 0.77 | 0.73 | 2.97 | 3.6 | 0.005 | 0.68 | 0.0 | 0.04 | 13.92 | 0.00 | 2.122 | 8.77 | 1.88 | 5.0 | 95.0 | 0.0 | -0.24 | 1.29 | 0.81 | 0.81 | 2.23 | 23684 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7Q3D | 13789 | 2024-04-11 | 2021-10-27 | 3.35 | 4.59 | 3.40 | 3.7 | 0.013 | 1.35 | 0.0 | 0.08 | 11.91 | 0.01 | 2.466 | 1.34 | 0.00 | 1.5 | 98.5 | 0.0 | 0.50 | 0.86 | 0.73 | 0.90 | 3.7 | 0.004 | 0.67 | 0.0 | 0.04 | 14.88 | 0.00 | 1.913 | 15.82 | 2.34 | 4.6 | 95.4 | 0.0 | 0.05 | 2.92 | 0.87 | 0.74 | 0.91 | 22298 | 1391 | 3 | 0 | 0 | 0 | 11249 | logfile |
✔ | 7LN5 | 23449 | 2024-04-15 | 2021-02-06 | 3.09 | 3.65 | 3.09 | 3.1 | 0.013 | 0.67 | 0.0 | 0.04 | 15.27 | 0.01 | 2.010 | 10.02 | 0.03 | 1.6 | 98.4 | 0.0 | 1.09 | 0.80 | 0.74 | 2.04 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 16.04 | 0.00 | 1.887 | 10.89 | 0.94 | 2.2 | 97.8 | 0.0 | 1.64 | 1.64 | 0.88 | 0.86 | 1.89 | 35051 | 4425 | 13 | 0 | 41 | 0 | 0 | logfile |
✔ | 6X2B | 22000 | 2024-04-11 | 2020-05-20 | 3.6 | 4.27 | 3.73 | 3.9 | 0.012 | 1.74 | 2.0 | 0.09 | 13.17 | 0.01 | 2.530 | 0.34 | 2.08 | 6.7 | 92.9 | 0.4 | -1.71 | 0.77 | 0.76 | 2.50 | 3.9 | 0.002 | 0.59 | 0.0 | 0.04 | 13.34 | 0.00 | 2.176 | 6.67 | 1.34 | 4.0 | 96.0 | 0.0 | 0.36 | 0.51 | 0.83 | 0.82 | 1.97 | 21120 | 2861 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LWN | 23551 | 2024-04-11 | 2021-03-01 | 2.94 | 3.14 | — | 3.1 | 0.013 | 1.77 | 4.0 | 0.09 | 12.61 | 0.01 | 2.516 | 0.15 | 0.87 | 4.6 | 95.1 | 0.3 | -0.76 | 0.74 | 0.83 | 3.80 | 3.1 | 0.006 | 0.68 | 0.0 | 0.05 | 14.79 | 0.00 | 2.147 | 5.77 | 1.73 | 3.2 | 96.8 | 0.0 | 0.07 | 0.60 | 0.76 | 0.83 | 3.13 | 23570 | 2980 | 11 | 0 | 37 | 0 | 0 | logfile |
✔ | 6VFS | 21187 | 2024-04-10 | 2020-01-06 | 3.3 | 3.50 | — | 3.5 | 0.004 | 0.71 | 0.0 | 0.04 | 11.05 | 0.00 | 2.062 | 1.79 | 0.13 | 2.9 | 97.1 | 0.0 | -0.56 | 0.60 | 0.53 | 1.84 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 16.08 | 0.00 | 1.861 | 11.76 | 1.74 | 3.4 | 96.6 | 0.0 | -0.48 | 1.99 | 0.72 | 0.77 | 1.57 | 71827 | 4576 | 27 | 0 | 17 | 0 | 36156 | logfile |
✔ | 7KE9 | 22835 | 2024-04-11 | 2020-10-10 | 3.08 | 3.62 | — | 3.5 | 0.013 | 1.74 | 0.0 | 0.09 | 11.76 | 0.01 | 2.491 | 0.11 | 0.04 | 5.8 | 94.0 | 0.2 | -0.81 | 0.80 | 0.80 | 4.06 | 3.5 | 0.003 | 0.75 | 1.0 | 0.04 | 13.15 | 0.00 | 2.195 | 6.23 | 1.42 | 3.5 | 96.5 | 0.0 | 0.33 | 1.21 | 0.79 | 0.83 | 3.21 | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7CTE | 30462 | 2024-04-08 | 2020-08-18 | 3.8 | 4.24 | — | 4.2 | 0.012 | 1.69 | 0.0 | 0.08 | 18.73 | 0.01 | 2.246 | 7.30 | 2.93 | 6.8 | 93.0 | 0.2 | -4.71 | 0.68 | 0.77 | 1.31 | 4.2 | 0.003 | 0.72 | 0.0 | 0.04 | 18.87 | 0.00 | 2.215 | 11.79 | 3.12 | 6.0 | 94.0 | 0.0 | -0.78 | 1.79 | 0.70 | 0.77 | 0.64 | 13699 | 1673 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7LYM | 23595 | 2024-04-11 | 2021-03-07 | 3.57 | 3.82 | — | 3.7 | 0.013 | 1.73 | 2.0 | 0.10 | 12.92 | 0.01 | 2.536 | 0.04 | 0.84 | 5.3 | 94.4 | 0.4 | -1.08 | 0.80 | 0.83 | 2.78 | 3.7 | 0.005 | 0.65 | 0.0 | 0.05 | 14.28 | 0.00 | 2.112 | 6.11 | 1.76 | 4.0 | 96.0 | 0.0 | 0.19 | 0.64 | 0.81 | 0.83 | 2.39 | 23916 | 3006 | 6 | 0 | 33 | 0 | 0 | logfile |
✔ | 7T9B | 25755 | 2024-04-11 | 2021-12-18 | 3.72 | 4.06 | 3.76 | 3.9 | 0.021 | 1.77 | 0.0 | 0.13 | 12.57 | 0.01 | 2.289 | 1.04 | 0.98 | 3.7 | 95.6 | 0.7 | 0.40 | 0.81 | 0.86 | 2.63 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 12.95 | 0.00 | 2.134 | 7.16 | 1.43 | 4.3 | 95.6 | 0.1 | -0.23 | 1.38 | 0.81 | 0.85 | 2.34 | 21592 | 2595 | 42 | 0 | 101 | 0 | 0 | logfile |
✔ | 8D46 | 27176 | 2024-04-14 | 2022-06-01 | 2.84 | 3.04 | 2.86 | 3.1 | 0.004 | 0.77 | 0.0 | 0.05 | 17.11 | 0.01 | 2.196 | 4.90 | 2.97 | 3.4 | 96.6 | 0.0 | -0.83 | 0.60 | 0.73 | 2.51 | 3.1 | 0.004 | 0.56 | 0.0 | 0.04 | 17.46 | 0.00 | 1.918 | 8.08 | 2.97 | 4.4 | 95.6 | 0.1 | -0.31 | 0.37 | 0.60 | 0.74 | 2.58 | 30206 | 1956 | 4 | 0 | 0 | 0 | 15096 | logfile |
✔ | 7LWi | 23546 | 2024-04-11 | 2021-03-01 | 3.07 | 3.28 | — | 3.2 | 0.013 | 1.78 | 1.0 | 0.10 | 13.05 | 0.01 | 2.478 | 0.08 | 1.07 | 5.3 | 94.4 | 0.2 | -1.20 | 0.73 | 0.79 | 3.51 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 14.56 | 0.00 | 2.133 | 6.77 | 1.83 | 4.0 | 96.0 | 0.0 | 0.07 | 0.67 | 0.73 | 0.81 | 2.56 | 23847 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7K9K | 22751 | 2024-04-05 | 2020-09-29 | 3.14 | 3.44 | 3.39 | 3.5 | 0.006 | 0.96 | 0.0 | 0.06 | 15.51 | 0.01 | 2.188 | 11.03 | 0.00 | 3.8 | 96.2 | 0.0 | -1.35 | 0.46 | 0.77 | 2.35 | 3.5 | 0.004 | 0.73 | 0.0 | 0.05 | 15.20 | 0.00 | 2.194 | 10.55 | 2.89 | 3.6 | 96.4 | 0.0 | -0.74 | 0.45 | 0.45 | 0.78 | 2.44 | 3202 | 402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7LWU | 23557 | 2024-04-11 | 2021-03-01 | 3.22 | 3.45 | — | 3.4 | 0.013 | 1.77 | 3.0 | 0.10 | 12.68 | 0.01 | 2.528 | 0.13 | 0.94 | 5.5 | 94.3 | 0.2 | -0.75 | 0.74 | 0.83 | 3.14 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 13.95 | 0.00 | 2.188 | 4.45 | 1.89 | 3.2 | 96.8 | 0.0 | 0.65 | 1.22 | 0.75 | 0.86 | 2.89 | 23576 | 2980 | 6 | 0 | 35 | 0 | 0 | logfile |
✔ | 7KDG | 22821 | 2024-04-11 | 2020-10-08 | 3.01 | 3.39 | — | 3.3 | 0.014 | 1.76 | 3.0 | 0.10 | 12.13 | 0.01 | 2.515 | 0.28 | 0.31 | 6.2 | 93.5 | 0.3 | -0.92 | 0.77 | 0.78 | 3.64 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 13.52 | 0.00 | 2.104 | 5.69 | 1.33 | 3.3 | 96.7 | 0.0 | 0.48 | 1.23 | 0.76 | 0.82 | 2.71 | 23700 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |