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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8G08 | 29649 | 2024-03-18 | 2023-01-31 | 2.8 | 3.66 | 2.85 | 3.1 | 0.005 | 0.68 | 0.0 | 0.23 | 7.76 | 0.00 | 1.824 | 0.59 | 0.00 | 2.4 | 97.6 | 0.0 | 1.01 | 0.74 | 0.70 | — | 3.3 | 0.004 | 0.68 | 0.0 | 0.02 | 6.39 | 0.00 | 1.808 | 1.98 | 0.00 | 7.2 | 92.8 | 0.0 | 1.27 | 1.85 | 0.81 | 0.79 | — | 19595 | 4859 | 26 | 0 | 10 | 0 | 0 | logfile |
✔ | 8TTB | 41604 | 2024-03-18 | 2023-08-13 | 2.77 | 3.26 | 2.76 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 7.77 | 0.00 | 1.428 | 3.70 | 0.00 | 1.6 | 98.4 | 0.0 | 1.83 | 0.83 | 0.87 | 5.03 | 3.0 | 0.003 | 0.50 | 0.0 | 0.04 | 11.55 | 0.00 | 1.975 | 4.88 | 0.41 | 2.1 | 97.9 | 0.0 | 1.20 | 1.02 | 0.84 | 0.88 | 4.52 | 21905 | 1376 | 5 | 0 | 2 | 0 | 10903 | logfile |
✔ | 8oRB | 17119 | 2024-03-25 | 2023-04-13 | 3.25 | 3.32 | 3.30 | 3.3 | 0.002 | 0.42 | 0.0 | 0.04 | 7.78 | 0.00 | 2.322 | 3.83 | 0.47 | 4.1 | 95.9 | 0.0 | 1.51 | 0.76 | 0.77 | 2.18 | 3.3 | 0.004 | 0.55 | 0.0 | 0.04 | 12.98 | 0.00 | 2.323 | 6.38 | 2.49 | 2.6 | 97.0 | 0.4 | 0.88 | 1.78 | 0.77 | 0.80 | 2.58 | 45984 | 5928 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DK6 | 30704 | 2024-03-21 | 2020-11-23 | 4.3 | 3.67 | — | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 7.79 | 0.00 | 2.096 | 1.23 | 0.06 | 3.0 | 97.0 | 0.0 | -3.17 | 0.59 | 0.45 | — | 3.5 | 0.004 | 0.72 | 0.0 | 0.05 | 12.35 | 0.00 | 2.099 | 18.36 | 0.11 | 7.0 | 93.0 | 0.0 | -1.47 | 1.83 | 0.73 | 0.65 | — | 31448 | 4042 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DR6 | 30824 | 2024-03-11 | 2020-12-26 | 4.1 | 4.22 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 7.81 | 0.00 | 2.196 | 10.05 | 0.12 | 4.9 | 94.9 | 0.1 | -2.74 | 0.68 | 0.63 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.04 | 13.22 | 0.00 | 2.122 | 15.61 | 0.03 | 3.2 | 96.7 | 0.0 | 0.11 | 2.26 | 0.73 | 0.73 | — | 59957 | 7661 | 35 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PG9 | 13389 | 2024-03-25 | 2021-08-13 | 3.7 | 4.05 | — | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 7.81 | 0.00 | 2.144 | 8.56 | 0.02 | 2.9 | 97.0 | 0.1 | -2.89 | 0.85 | 0.79 | 2.74 | 3.7 | 0.004 | 0.77 | 0.0 | 0.04 | 14.02 | 0.00 | 2.147 | 11.98 | 2.20 | 2.8 | 97.2 | 0.0 | 0.75 | 0.90 | 0.89 | 0.86 | 2.38 | 45326 | 6195 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WKD | 32565 | 2024-03-17 | 2022-01-09 | 3.01 | 2.29 | — | 3.1 | 0.007 | 0.41 | 1.0 | 0.04 | 7.82 | 0.00 | 1.978 | 6.84 | 0.31 | 1.4 | 98.6 | 0.0 | -1.70 | 0.68 | 0.66 | 1.77 | 3.1 | 0.017 | 0.75 | 0.0 | 0.04 | 14.60 | 0.00 | 1.907 | 12.66 | 2.92 | 2.6 | 97.4 | 0.0 | 0.72 | 1.01 | 0.72 | 0.74 | 2.49 | 17515 | 1120 | 6 | 0 | 0 | 0 | 8712 | logfile |
✔ | 6WL1 | 21815 | 2024-03-16 | 2020-04-17 | 4.0 | 4.02 | — | 4.0 | 0.007 | 0.81 | 0.0 | 0.05 | 7.85 | 0.00 | 2.413 | 3.17 | 0.00 | 0.0 | 100.0 | 0.0 | -1.08 | 0.71 | 0.85 | — | 4.0 | 0.003 | 0.48 | 0.0 | 0.03 | 16.55 | 0.00 | 2.272 | 7.01 | 4.66 | 0.0 | 100.0 | 0.0 | 6.35 | 0.72 | 0.72 | 0.86 | — | 14612 | 1872 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N2P | 9332 | 2024-03-16 | 2018-11-13 | 4.0 | 4.78 | — | 4.2 | 0.009 | 0.87 | 0.0 | 0.04 | 7.86 | 0.01 | 2.203 | 7.41 | 0.00 | 12.8 | 87.2 | 0.0 | -4.67 | 0.58 | 0.72 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 11.00 | 0.00 | 2.169 | 8.03 | 0.72 | 9.1 | 90.9 | 0.0 | 0.39 | 1.39 | 0.59 | 0.82 | — | 14570 | 880 | 10 | 0 | 0 | 0 | 7380 | logfile |
✔ | 7XA3 | 33086 | 2024-03-14 | 2022-03-17 | 2.9 | 2.18 | — | 2.1 | 0.005 | 0.85 | 0.0 | 0.05 | 7.87 | 0.01 | 2.250 | 4.13 | 0.00 | 2.5 | 97.5 | 0.0 | 0.60 | 0.75 | 0.74 | 3.21 | 1.7 | 0.003 | 0.61 | 0.0 | 0.04 | 13.92 | 0.00 | 2.182 | 8.84 | 3.04 | 3.4 | 96.6 | 0.0 | 1.55 | 1.16 | 0.78 | 0.79 | 2.66 | 9591 | 1220 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LH3 | 23335 | 2024-03-15 | 2021-01-21 | 4.3 | 4.87 | — | 4.6 | 0.001 | 0.40 | 0.0 | 0.04 | 7.88 | 0.00 | 2.258 | 4.71 | 1.06 | 1.8 | 98.2 | 0.0 | 2.29 | 0.61 | 0.73 | — | 4.6 | 0.003 | 0.61 | 0.0 | 0.04 | 10.57 | 0.00 | 2.271 | 9.94 | 0.00 | 2.4 | 97.6 | 0.0 | 1.82 | 1.10 | 0.63 | 0.82 | — | 10452 | 1360 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DRW | 30828 | 2024-03-16 | 2020-12-29 | 4.2 | 4.34 | — | 4.3 | 0.002 | 0.53 | 0.0 | 0.04 | 7.88 | 0.00 | 2.196 | 8.15 | 0.00 | 3.0 | 96.9 | 0.1 | -2.45 | 0.62 | 0.49 | — | 4.3 | 0.005 | 0.83 | 0.0 | 0.05 | 13.09 | 0.01 | 1.983 | 19.52 | 0.04 | 3.4 | 96.5 | 0.0 | 0.02 | 1.87 | 0.74 | 0.70 | — | 71650 | 9108 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXD | 32176 | 2024-03-21 | 2021-11-12 | 4.0 | 4.60 | — | 4.2 | 0.003 | 0.50 | 0.0 | 0.04 | 7.89 | 0.00 | 2.091 | 7.52 | 0.03 | 4.0 | 95.9 | 0.2 | -2.30 | 0.70 | 0.65 | — | 4.3 | 0.005 | 0.91 | 2.0 | 0.05 | 13.91 | 0.00 | 1.744 | 21.85 | 2.74 | 4.6 | 95.4 | 0.0 | -0.79 | 1.59 | 0.74 | 0.74 | — | 30194 | 3829 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5UVN | 8608 | 2024-03-17 | 2017-02-20 | 3.96 | 4.04 | — | 4.0 | 0.012 | 1.13 | 0.0 | 0.06 | 7.90 | 0.01 | 2.013 | 20.37 | 0.40 | 8.5 | 90.9 | 0.6 | -4.03 | 0.73 | 0.69 | 2.65 | 4.0 | 0.005 | 0.85 | 0.0 | 0.05 | 13.06 | 0.01 | 2.149 | 12.71 | 2.29 | 10.0 | 89.3 | 0.7 | -1.75 | 1.48 | 0.82 | 0.83 | 2.69 | 16902 | 2214 | 6 | 0 | 282 | 0 | 0 | logfile |
✔ | 8BHA | 16050 | 2024-03-20 | 2022-10-30 | 2.67 | 3.29 | 2.72 | 3.1 | 0.008 | 0.58 | 0.0 | 0.04 | 7.91 | 0.00 | 2.088 | 1.76 | 0.00 | 1.2 | 98.8 | 0.0 | 2.00 | 0.74 | 0.88 | 5.51 | 3.1 | 0.003 | 0.49 | 0.0 | 0.04 | 12.53 | 0.00 | 2.110 | 4.06 | 0.60 | 1.9 | 98.1 | 0.0 | 1.71 | 0.81 | 0.72 | 0.88 | 4.58 | 27220 | 1680 | 10 | 0 | 10 | 0 | 13415 | logfile |
✔ | 7DK4 | 30702 | 2024-03-22 | 2020-11-23 | 3.8 | 3.20 | — | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 7.92 | 0.00 | 2.106 | 1.33 | 0.15 | 2.8 | 97.2 | 0.0 | -3.26 | 0.58 | 0.47 | 1.13 | 3.1 | 0.003 | 0.68 | 0.0 | 0.04 | 14.99 | 0.00 | 2.075 | 16.68 | 3.15 | 5.9 | 94.1 | 0.0 | -1.54 | 1.49 | 0.72 | 0.66 | 1.43 | 34707 | 4470 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DF4 | 30661 | 2024-03-21 | 2020-11-06 | 3.8 | 3.53 | — | 3.3 | 0.004 | 0.57 | 0.0 | 0.06 | 7.93 | 0.02 | 1.519 | 10.96 | 0.21 | 4.2 | 95.7 | 0.1 | -2.40 | 0.73 | 0.56 | 1.15 | 3.3 | 0.004 | 0.80 | 2.0 | 0.05 | 14.04 | 0.00 | 2.068 | 18.19 | 1.98 | 3.8 | 96.0 | 0.1 | -0.52 | 1.77 | 0.77 | 0.65 | 1.03 | 30920 | 3798 | 25 | 0 | 72 | 0 | 0 | logfile |
✔ | 7WZR | 32912 | 2024-03-20 | 2022-02-19 | 4.7 | 4.70 | — | 4.4 | 0.008 | 1.21 | 3.0 | 0.06 | 7.95 | 0.01 | 2.197 | 7.80 | 0.00 | 21.6 | 77.2 | 1.2 | -4.58 | 0.76 | 0.65 | — | 4.4 | 0.002 | 0.67 | 0.0 | 0.04 | 4.72 | 0.00 | 2.151 | 1.89 | 0.00 | 11.3 | 88.4 | 0.3 | -0.14 | 1.59 | 0.76 | 0.69 | — | 27037 | 5440 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G09 | 29650 | 2024-03-18 | 2023-01-31 | 3.1 | 3.88 | 3.23 | 3.2 | 0.005 | 0.71 | 0.0 | 0.23 | 7.95 | 0.00 | 1.766 | 0.75 | 0.00 | 3.1 | 96.9 | 0.0 | 0.54 | 0.74 | 0.70 | — | 3.4 | 0.008 | 0.98 | 0.0 | 0.06 | 7.89 | 0.01 | 1.657 | 7.92 | 0.00 | 12.9 | 87.1 | 0.0 | -1.17 | 0.74 | 0.82 | 0.82 | — | 19599 | 4860 | 26 | 0 | 10 | 0 | 0 | logfile |
✔ | 6X32 | 22015 | 2024-03-12 | 2020-05-21 | 3.8 | 3.75 | — | 3.9 | 0.001 | 0.36 | 0.0 | 0.03 | 7.99 | 0.00 | 2.266 | 3.27 | 0.00 | 1.4 | 98.6 | 0.0 | -3.72 | 0.56 | 0.69 | 2.26 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 13.13 | 0.00 | 2.125 | 8.65 | 2.35 | 2.9 | 97.1 | 0.0 | 0.59 | 1.67 | 0.60 | 0.73 | 1.88 | 114280 | 14744 | 16 | 0 | 1416 | 0 | 0 | logfile |