The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8Q9E | 18278 | 2024-03-11 | 2023-08-20 | 2.97 | 2.51 | 2.93 | 2.7 | 0.011 | 1.89 | 2.0 | 0.11 | 11.77 | 0.01 | 2.528 | 0.59 | 1.32 | 1.9 | 98.1 | 0.0 | -1.47 | 0.25 | 0.73 | 5.90 | 2.7 | 0.002 | 0.57 | 0.0 | 0.05 | 16.68 | 0.01 | 2.249 | 3.25 | 0.53 | 1.2 | 98.8 | 0.0 | -1.41 | 1.29 | 0.35 | 0.83 | 4.43 | 6768 | 432 | 6 | 0 | 0 | 0 | 3456 | logfile |
✔ | 8Q9K | 18284 | 2024-03-11 | 2023-08-20 | 3.2 | 3.24 | 3.02 | 3.3 | 0.011 | 2.00 | 0.0 | 0.09 | 9.09 | 0.01 | 2.527 | 0.79 | 0.00 | 5.1 | 94.9 | 0.0 | -1.94 | 0.39 | 0.82 | 6.44 | 3.2 | 0.004 | 0.57 | 0.0 | 0.05 | 14.16 | 0.00 | 2.094 | 4.60 | 2.26 | 3.5 | 96.5 | 0.0 | -1.46 | 1.48 | 0.35 | 0.85 | 5.80 | 6306 | 408 | 6 | 0 | 0 | 0 | 3216 | logfile |
✔ | 7YFE | 33787 | 2024-03-03 | 2022-07-08 | 3.4 | 3.99 | 3.52 | 3.9 | 0.003 | 0.66 | 1.0 | 0.05 | 13.64 | 0.00 | 2.039 | 7.79 | 0.95 | 3.9 | 96.1 | 0.0 | -0.18 | 0.39 | 0.80 | 1.74 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 16.42 | 0.00 | 2.054 | 11.14 | 4.11 | 4.5 | 95.5 | 0.0 | -0.14 | 2.08 | 0.35 | 0.84 | 1.84 | 156282 | 19807 | 32 | 17 | 7 | 0 | 0 | logfile |
✔ | 7oZG | 13123 | 2024-03-10 | 2021-06-28 | 3.3 | 3.21 | 2.71 | 3.6 | 0.023 | 1.83 | 0.0 | 0.10 | 12.75 | 0.01 | 2.254 | 17.09 | 0.00 | 8.7 | 91.3 | 0.0 | -4.01 | 0.40 | 0.73 | 3.72 | 3.7 | 0.006 | 0.82 | 0.0 | 0.05 | 15.66 | 0.00 | 2.270 | 17.98 | 10.82 | 17.5 | 82.5 | 0.0 | -4.72 | 1.62 | 0.35 | 0.69 | 4.53 | 4960 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QJY | 14026 | 2024-03-10 | 2021-12-17 | 3.14 | 2.93 | 3.08 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.32 | 0.01 | 2.519 | 0.00 | 0.25 | 5.7 | 94.3 | 0.0 | -2.50 | 0.38 | 0.82 | 5.27 | 3.1 | 0.005 | 0.73 | 0.0 | 0.05 | 17.15 | 0.00 | 2.130 | 8.40 | 1.52 | 2.7 | 97.3 | 0.0 | -2.07 | 2.60 | 0.35 | 0.83 | 4.04 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GWB | 34308 | 2024-03-18 | 2022-09-16 | 2.75 | 2.95 | 2.85 | 25.0 | 0.009 | 1.07 | 1.0 | 0.05 | 17.30 | 0.01 | 1.556 | 16.84 | 2.25 | 7.5 | 92.3 | 0.2 | -2.40 | 0.29 | 0.01 | 0.23 | 25.0 | 0.004 | 0.81 | 0.0 | 0.04 | 17.94 | 0.01 | 1.944 | 21.98 | 3.71 | 9.2 | 90.7 | 0.1 | -1.83 | 1.62 | 0.36 | 0.18 | 0.12 | 21879 | 2655 | 16 | 54 | 10 | 7 | 0 | logfile |
✔ | 7U16 | 26279 | 2024-03-10 | 2022-02-19 | 2.7 | 3.30 | — | 3.5 | 0.004 | 0.62 | 0.0 | 0.06 | 16.84 | 0.00 | 2.310 | 8.58 | 0.00 | 6.8 | 93.2 | 0.0 | -2.67 | 0.29 | 0.68 | 2.62 | 3.5 | 0.003 | 0.58 | 0.0 | 0.05 | 14.47 | 0.00 | 2.180 | 7.27 | 1.31 | 4.8 | 95.2 | 0.0 | -2.62 | 1.34 | 0.36 | 0.80 | 4.68 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8JJo | 36361 | 2024-03-10 | 2023-05-31 | 3.4 | 3.75 | 3.53 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 17.70 | 0.00 | 2.184 | 10.68 | 0.31 | 5.7 | 94.3 | 0.0 | -0.11 | 0.40 | 0.71 | 1.06 | 3.8 | 0.003 | 0.53 | 0.0 | 0.04 | 18.13 | 0.00 | 2.180 | 8.55 | 3.72 | 5.7 | 94.1 | 0.3 | 1.01 | 0.35 | 0.36 | 0.73 | 1.41 | 3016 | 375 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7DA4 | 30622 | 2024-03-10 | 2020-10-14 | 4.24 | 3.75 | — | 4.2 | 0.010 | 1.54 | 0.0 | 0.08 | 17.16 | 0.01 | 2.245 | 79.80 | 0.00 | 50.0 | 50.0 | 0.0 | -8.65 | 0.39 | 0.66 | — | 4.3 | 0.004 | 0.98 | 0.0 | 0.04 | 11.88 | 0.00 | 2.201 | 17.17 | 0.00 | 25.0 | 75.0 | 0.0 | -5.95 | 3.06 | 0.36 | 0.60 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QJX | 14025 | 2024-03-16 | 2021-12-17 | 2.99 | 3.05 | 3.00 | 2.8 | 0.014 | 2.56 | 5.0 | 0.24 | 13.83 | 0.02 | 2.532 | 0.29 | 0.00 | 1.7 | 98.2 | 0.1 | -2.52 | 0.35 | 0.70 | 3.48 | 2.8 | 0.005 | 1.22 | 0.0 | 0.31 | 16.18 | 0.01 | 2.137 | 3.97 | 2.05 | 7.0 | 93.0 | 0.0 | -3.76 | 2.46 | 0.36 | 0.78 | 3.63 | 13860 | 900 | 12 | 0 | 0 | 0 | 7056 | logfile |
✔ | 5VZL | 8749 | 2024-03-16 | 2017-05-29 | 3.9 | 4.38 | — | 19.0 | 0.006 | 0.96 | 0.0 | 0.05 | 17.27 | 0.01 | 2.216 | 7.72 | 0.25 | 8.4 | 91.6 | 0.0 | -4.13 | 0.31 | 0.03 | -0.03 | 17.0 | 0.002 | 0.61 | 0.0 | 0.04 | 17.87 | 0.00 | 1.222 | 10.54 | 1.58 | 4.2 | 95.8 | 0.0 | -0.94 | 1.05 | 0.36 | 0.16 | 0.61 | 13915 | 1451 | 3 | 115 | 1 | 0 | 0 | logfile |
✔ | 8H9N | 34574 | 2024-03-10 | 2022-10-25 | 3.56 | 3.82 | 3.61 | 3.7 | 0.007 | 0.88 | 0.0 | 0.05 | 15.25 | 0.01 | 2.178 | 14.62 | 0.00 | 5.6 | 94.4 | 0.0 | -2.28 | 0.36 | 0.77 | 1.69 | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 17.87 | 0.00 | 2.205 | 10.74 | 3.66 | 3.4 | 96.6 | 0.0 | 2.51 | 1.13 | 0.36 | 0.77 | 1.69 | 3381 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q7M | 18224 | 2024-03-10 | 2023-08-16 | 3.26 | 3.16 | 3.21 | 3.3 | 0.011 | 1.96 | 4.0 | 0.11 | 11.70 | 0.01 | 2.490 | 0.38 | 0.17 | 3.1 | 96.9 | 0.0 | -1.88 | 0.32 | 0.70 | 3.84 | 3.2 | 0.006 | 0.76 | 0.0 | 0.05 | 15.05 | 0.00 | 2.219 | 6.33 | 1.88 | 1.8 | 98.2 | 0.0 | -1.83 | 0.84 | 0.36 | 0.87 | 4.15 | 5109 | 669 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TQU | 26072 | 2024-03-18 | 2022-01-27 | 3.8 | 3.89 | 3.57 | 3.8 | 0.021 | 1.81 | 0.0 | 0.10 | 9.74 | 0.01 | 2.375 | 0.92 | 0.00 | 2.1 | 97.9 | 0.0 | 0.71 | 0.38 | 0.84 | 3.42 | 3.8 | 0.004 | 0.68 | 0.0 | 0.04 | 15.19 | 0.00 | 2.103 | 11.48 | 3.17 | 3.5 | 96.5 | 0.0 | -0.34 | 0.75 | 0.36 | 0.84 | 2.60 | 20891 | 2544 | 17 | 0 | 217 | 0 | 0 | logfile |
✔ | 7T2E | 25611 | 2024-03-10 | 2021-12-03 | 2.7 | 3.14 | — | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 16.11 | 0.00 | 2.242 | 1.92 | 1.18 | 0.3 | 99.7 | 0.0 | 0.14 | 0.34 | 0.84 | 5.04 | 3.0 | 0.002 | 0.48 | 0.0 | 0.04 | 16.27 | 0.00 | 2.223 | 2.35 | 2.36 | 0.6 | 99.4 | 0.0 | 0.37 | 0.12 | 0.36 | 0.86 | 4.66 | 2390 | 312 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YNT | 33971 | 2024-03-10 | 2022-07-31 | 3.1 | 2.98 | 2.27 | 4.1 | 0.004 | 0.59 | 0.0 | 0.06 | 11.35 | 0.00 | 2.275 | 13.34 | 0.00 | 8.9 | 91.1 | 0.0 | -5.55 | 0.42 | 0.70 | 4.17 | 4.1 | 0.004 | 0.67 | 0.0 | 0.06 | 13.80 | 0.00 | 2.244 | 11.90 | 1.25 | 14.9 | 85.1 | 0.0 | -4.55 | 0.45 | 0.36 | 0.64 | 3.22 | 2364 | 348 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A05 | 15048 | 2024-03-10 | 2022-05-26 | 3.4 | 3.47 | 3.11 | 3.5 | 0.002 | 0.43 | 0.0 | 0.05 | 12.67 | 0.00 | 2.328 | 2.02 | 0.00 | 2.2 | 97.8 | 0.0 | 0.42 | 0.37 | 0.84 | 2.71 | 3.5 | 0.002 | 0.46 | 0.0 | 0.05 | 14.84 | 0.00 | 2.255 | 2.02 | 2.41 | 2.2 | 97.8 | 0.0 | 0.36 | 0.20 | 0.36 | 0.85 | 2.71 | 764 | 91 | 2 | 0 | 5 | 0 | 0 | logfile |
✔ | 8D9N | 27267 | 2024-03-11 | 2022-06-10 | 4.4 | 4.74 | 3.88 | 34.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.21 | 0.00 | 2.107 | 2.77 | 0.38 | 5.8 | 94.2 | 0.0 | -0.81 | 0.28 | -0.07 | — | 20.0 | 0.002 | 0.66 | 0.0 | 0.04 | 13.37 | 0.00 | 2.199 | 4.56 | 0.00 | 5.3 | 94.7 | 0.0 | 0.51 | 0.56 | 0.36 | -0.05 | — | 7186 | 902 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BGS | 16035 | 2024-03-10 | 2022-10-28 | 3.16 | 3.15 | 2.98 | 3.3 | 0.009 | 1.64 | 0.0 | 0.10 | 13.08 | 0.01 | 2.368 | 1.46 | 0.00 | 6.8 | 93.2 | 0.0 | -3.72 | 0.43 | 0.86 | 5.04 | 3.3 | 0.004 | 0.75 | 0.0 | 0.05 | 15.35 | 0.00 | 2.218 | 5.73 | 1.73 | 2.5 | 97.5 | 0.0 | -2.74 | 1.30 | 0.36 | 0.80 | 3.20 | 4018 | 525 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F2M | 28822 | 2024-03-10 | 2022-11-08 | 3.7 | 3.60 | 3.53 | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 16.38 | 0.01 | 2.253 | 11.21 | 0.38 | 5.0 | 94.0 | 1.0 | -0.85 | 0.33 | 0.72 | 1.58 | 3.6 | 0.004 | 0.77 | 0.0 | 0.04 | 17.00 | 0.01 | 2.178 | 11.11 | 3.84 | 7.4 | 91.6 | 1.0 | -0.40 | 0.75 | 0.36 | 0.78 | 1.70 | 4696 | 592 | 4 | 0 | 0 | 0 | 0 | logfile |