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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8BVW | 16274 | 2024-03-18 | 2022-12-20 | 4.0 | 3.84 | 3.33 | 3.4 | 0.006 | 0.90 | 0.0 | 0.05 | 17.06 | 0.01 | 1.730 | 5.60 | 0.06 | 3.1 | 96.9 | 0.0 | -0.71 | 0.71 | 0.56 | — | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 18.66 | 0.00 | 1.973 | 11.02 | 1.10 | 2.7 | 97.3 | 0.0 | 0.82 | 0.61 | 0.71 | 0.57 | — | 84783 | 9510 | 54 | 412 | 46 | 0 | 0 | logfile |
✔ | 7X6U | 33027 | 2024-03-24 | 2022-03-08 | 4.5 | 4.59 | 4.67 | 4.5 | 0.004 | 0.94 | 0.0 | 0.05 | 13.23 | 0.01 | 0.507 | 29.62 | 0.00 | 10.1 | 89.3 | 0.6 | -3.46 | 0.38 | 0.58 | — | 4.5 | 0.005 | 0.89 | 0.0 | 0.05 | 13.23 | 0.01 | 2.142 | 21.52 | 0.00 | 12.0 | 87.6 | 0.3 | -3.35 | 0.54 | 0.38 | 0.57 | — | 39324 | 5328 | 24 | 0 | 30 | 0 | 0 | logfile |
✔ | 7K8A | 22724 | 2024-03-15 | 2020-09-26 | 3.65 | 3.57 | — | 3.7 | 0.004 | 0.92 | 1.0 | 0.05 | 13.38 | 0.01 | 2.226 | 16.09 | 0.17 | 6.4 | 93.6 | 0.0 | -1.30 | 0.40 | 0.55 | 0.67 | 3.7 | 0.004 | 0.82 | 0.0 | 0.04 | 15.98 | 0.01 | 2.180 | 17.79 | 5.44 | 5.7 | 94.2 | 0.1 | -0.95 | 0.44 | 0.43 | 0.57 | 0.27 | 5513 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3iZK | 5247 | 2024-03-11 | 2010-10-29 | 4.9 | 4.48 | — | 7.1 | 0.014 | 1.48 | 16.0 | 0.08 | 12.45 | 0.02 | 2.461 | 2.38 | 0.77 | 2.0 | 97.5 | 0.4 | -1.62 | 0.65 | 0.48 | — | 6.9 | 0.003 | 0.76 | 0.0 | 0.05 | 13.33 | 0.00 | 2.167 | 26.82 | 0.00 | 4.3 | 95.7 | 0.0 | -0.87 | 2.00 | 0.75 | 0.57 | — | 58448 | 7856 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EDX | 31075 | 2024-03-18 | 2021-03-17 | 4.5 | 4.87 | — | 4.1 | 0.008 | 1.09 | 34.0 | 0.07 | 16.72 | 0.01 | 1.497 | 20.97 | 3.31 | 6.1 | 93.4 | 0.5 | -3.70 | 0.67 | 0.35 | — | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 15.38 | 0.00 | 2.106 | 13.40 | 0.00 | 4.9 | 95.0 | 0.1 | -0.23 | 0.92 | 0.78 | 0.58 | — | 81790 | 9837 | 46 | 154 | 10 | 0 | 0 | logfile |
✔ | 8DWJ | 27756 | 2024-03-10 | 2022-08-01 | 3.9 | 3.19 | 3.82 | 3.1 | 0.005 | 1.05 | 0.0 | 0.06 | 16.24 | 0.01 | 2.218 | 13.71 | 0.33 | 5.9 | 94.1 | 0.0 | -2.71 | 0.33 | 0.57 | 0.88 | 3.1 | 0.003 | 0.64 | 0.0 | 0.04 | 18.17 | 0.00 | 2.219 | 15.55 | 1.99 | 5.0 | 95.0 | 0.0 | -0.70 | 1.42 | 0.34 | 0.58 | 0.80 | 3043 | 339 | 3 | 11 | 2 | 0 | 0 | logfile |
✔ | 8B3A | 15824 | 2024-03-10 | 2022-09-16 | 3.8 | 3.66 | 2.91 | 4.1 | 0.009 | 1.88 | 0.0 | 0.10 | 27.06 | 0.09 | 2.613 | 1.89 | 0.00 | 0.0 | 100.0 | 0.0 | -4.71 | 0.55 | 0.64 | 5.18 | 4.1 | 0.079 | 6.11 | 24.0 | 0.43 | 24.10 | 0.05 | 1.656 | 300.95 | 53.33 | 52.7 | 4.0 | 43.3 | -10.74 | 2.56 | 0.43 | 0.58 | 3.10 | 2010 | 210 | 30 | 0 | 60 | 0 | 0 | logfile |
✔ | 7NiV | 12366 | 2024-03-16 | 2021-02-14 | 3.6 | 3.27 | — | 3.4 | 0.008 | 1.04 | 0.0 | 0.06 | 15.58 | 0.01 | 2.197 | 22.51 | 0.89 | 9.6 | 90.3 | 0.0 | -5.19 | 0.53 | 0.62 | 1.53 | 3.4 | 0.004 | 0.72 | 0.0 | 0.04 | 16.27 | 0.00 | 2.073 | 14.08 | 3.57 | 7.1 | 92.9 | 0.0 | -1.64 | 0.86 | 0.51 | 0.58 | 0.97 | 15724 | 2020 | 6 | 0 | 8 | 0 | 0 | logfile |
✔ | 7BZX | 30262 | 2024-03-10 | 2020-04-28 | 4.0 | 4.19 | — | 3.2 | 0.019 | 2.22 | 9.0 | 0.12 | 8.56 | 0.01 | 2.485 | 2.40 | 0.00 | 6.6 | 92.1 | 1.3 | -2.90 | 0.47 | 0.25 | — | 2.8 | 0.006 | 1.18 | 0.0 | 0.05 | 9.20 | 0.01 | 2.035 | 27.91 | 0.00 | 24.1 | 75.8 | 0.1 | -4.93 | 2.97 | 0.75 | 0.58 | — | 5652 | 1154 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HHZ | 34808 | 2024-03-25 | 2022-11-17 | 4.28 | 4.33 | 4.27 | 4.2 | 0.004 | 0.74 | 0.0 | 0.05 | 12.44 | 0.01 | 1.825 | 22.52 | 0.00 | 6.6 | 93.4 | 0.0 | -1.30 | 0.47 | 0.50 | — | 4.2 | 0.007 | 0.93 | 0.0 | 0.05 | 13.01 | 0.01 | 1.975 | 30.98 | 0.03 | 10.2 | 89.8 | 0.1 | -2.12 | 1.17 | 0.50 | 0.58 | — | 32020 | 4243 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V4J | 31713 | 2024-03-14 | 2021-08-13 | 3.5 | 3.64 | — | 3.8 | 0.003 | 0.67 | 0.0 | 0.05 | 13.95 | 0.01 | 2.092 | 19.96 | 0.00 | 8.2 | 91.8 | 0.0 | -1.60 | 0.61 | 0.52 | 1.21 | 3.8 | 0.003 | 0.76 | 0.0 | 0.05 | 16.53 | 0.01 | 2.080 | 22.59 | 1.98 | 6.7 | 93.3 | 0.0 | -1.65 | 0.52 | 0.63 | 0.58 | 1.23 | 9850 | 1275 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZD0 | 11172 | 2024-03-11 | 2020-06-13 | 4.6 | 4.62 | 2.80 | 3.7 | 0.004 | 0.91 | 0.0 | 0.05 | 7.55 | 0.00 | 2.207 | 10.05 | 0.00 | 10.1 | 89.8 | 0.1 | -4.73 | 0.59 | 0.58 | — | 4.5 | 0.003 | 0.78 | 0.0 | 0.04 | 5.38 | 0.00 | 2.341 | 5.89 | 0.00 | 15.0 | 84.6 | 0.4 | -4.68 | 2.32 | 0.61 | 0.58 | — | 7962 | 1611 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EU2 | 3957 | 2024-03-23 | 2017-10-27 | 3.4 | 3.45 | — | 6.0 | 0.004 | 1.04 | 0.0 | 0.06 | 11.35 | 0.01 | 1.787 | 5.04 | 0.40 | 13.0 | 86.5 | 0.5 | -5.22 | 0.27 | 0.04 | 0.18 | 3.4 | 0.006 | 1.00 | 2.0 | 0.05 | 15.52 | 0.01 | 1.818 | 17.85 | 2.02 | 11.9 | 87.8 | 0.3 | -2.67 | 1.60 | 0.61 | 0.58 | 0.33 | 38329 | 4825 | 22 | 0 | 7 | 0 | 0 | logfile |
✔ | 6RAY | 4787 | 2024-03-23 | 2019-04-08 | 4.28 | 4.39 | 4.31 | 4.4 | 0.013 | 1.77 | 39.0 | 0.16 | 18.63 | 0.02 | 1.031 | 19.77 | 7.45 | 17.4 | 81.8 | 0.8 | -5.68 | 0.58 | 0.59 | — | 4.3 | 0.003 | 0.82 | 0.0 | 0.04 | 15.37 | 0.00 | 2.074 | 15.31 | 0.12 | 11.4 | 88.5 | 0.0 | -3.31 | 1.14 | 0.61 | 0.58 | — | 39071 | 4887 | 18 | 13 | 6 | 0 | 0 | logfile |
✔ | 8P83 | 17540 | 2024-03-23 | 2023-05-31 | 3.87 | 4.82 | 3.91 | 3.8 | 0.003 | 0.66 | 3.0 | 0.06 | 4.70 | 0.00 | 2.470 | 0.84 | 0.00 | 2.0 | 97.9 | 0.1 | 0.35 | 0.81 | 0.58 | — | 3.8 | 0.003 | 0.79 | 0.0 | 0.04 | 5.70 | 0.01 | 2.230 | 9.10 | 0.00 | 7.0 | 93.0 | 0.0 | -1.97 | 2.83 | 0.85 | 0.58 | — | 35656 | 7036 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CED | 16606 | 2024-03-25 | 2023-02-01 | 4.15 | 3.12 | 4.20 | 3.1 | 0.009 | 1.59 | 17.0 | 0.11 | 23.64 | 0.02 | 1.605 | 10.40 | 3.91 | 6.4 | 92.9 | 0.7 | -3.32 | 0.50 | 0.64 | — | 3.1 | 0.002 | 0.62 | 0.0 | 0.04 | 22.60 | 0.00 | 2.070 | 14.87 | 0.04 | 2.8 | 97.0 | 0.2 | 0.18 | 0.83 | 0.49 | 0.58 | — | 51964 | 2928 | 22 | 1340 | 0 | 0 | 0 | logfile |
✔ | 7NCJ | 12268 | 2024-03-15 | 2021-01-28 | 4.23 | 3.11 | 3.97 | 4.5 | 0.011 | 1.60 | 2.0 | 0.10 | 13.68 | 0.01 | 2.444 | 0.18 | 0.76 | 7.7 | 92.0 | 0.3 | -2.36 | 0.65 | 0.46 | — | 4.3 | 0.003 | 0.63 | 1.0 | 0.05 | 14.34 | 0.00 | 1.937 | 16.69 | 0.00 | 10.8 | 89.2 | 0.0 | -3.10 | 1.40 | 0.70 | 0.58 | — | 10860 | 774 | 12 | 0 | 0 | 0 | 5586 | logfile |
✔ | 8JAF | 36126 | 2024-03-10 | 2023-05-05 | 3.1 | 2.18 | 3.07 | 1.5 | 0.008 | 0.97 | 0.0 | 0.05 | 12.50 | 0.01 | 2.237 | 17.42 | 0.87 | 7.3 | 92.7 | 0.0 | -2.04 | 0.64 | 0.56 | 4.02 | 1.9 | 0.004 | 0.69 | 0.0 | 0.04 | 13.15 | 0.01 | 2.231 | 14.27 | 2.91 | 5.6 | 94.4 | 0.0 | -1.42 | 0.46 | 0.66 | 0.58 | 2.61 | 3862 | 549 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UUZ | 42602 | 2024-03-10 | 2023-11-02 | 3.77 | 4.50 | 3.78 | 8.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.06 | 0.00 | 2.213 | 38.18 | 12.61 | 6.6 | 93.4 | 0.0 | -1.81 | 0.61 | 0.33 | 0.27 | 8.5 | 0.003 | 0.91 | 0.0 | 0.05 | 16.74 | 0.01 | 2.249 | 38.64 | 6.52 | 8.0 | 92.0 | 0.0 | -1.98 | 1.31 | 0.75 | 0.58 | 0.64 | 2258 | 300 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCi | 12267 | 2024-03-15 | 2021-01-28 | 3.55 | 3.67 | 3.44 | 4.0 | 0.012 | 1.57 | 2.0 | 0.10 | 15.57 | 0.01 | 2.481 | 0.35 | 0.00 | 8.9 | 91.1 | 0.0 | -3.74 | 0.68 | 0.59 | 1.81 | 3.8 | 0.004 | 0.63 | 2.0 | 0.05 | 15.17 | 0.00 | 1.925 | 22.63 | 6.30 | 14.3 | 85.7 | 0.0 | -4.47 | 1.57 | 0.64 | 0.58 | 0.62 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |