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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8AYE | 15712 | 2024-04-15 | 2022-09-02 | 1.96 | 2.01 | 1.96 | 2.0 | 0.008 | 0.94 | 0.0 | 0.05 | 23.14 | 0.02 | 1.743 | 4.42 | 1.25 | 2.6 | 97.3 | 0.1 | 0.33 | 0.76 | 0.89 | 6.01 | 2.0 | 0.005 | 0.76 | 0.0 | 0.04 | 22.86 | 0.01 | 1.784 | 4.80 | 1.60 | 2.5 | 97.4 | 0.1 | 0.71 | 0.85 | 0.76 | 0.91 | 5.94 | 140205 | 5587 | 67 | 4475 | 311 | 0 | 0 | logfile |
✔ | 7P3K | 13180 | 2024-04-14 | 2021-07-08 | 2.9 | 2.99 | — | 2.9 | 0.007 | 0.82 | 1.0 | 0.05 | 22.41 | 0.02 | 1.871 | 4.21 | 0.09 | 3.5 | 96.4 | 0.1 | -0.61 | 0.87 | 0.85 | 2.82 | 2.9 | 0.003 | 0.62 | 0.0 | 0.03 | 22.59 | 0.01 | 1.867 | 8.79 | 2.49 | 3.2 | 96.7 | 0.1 | 0.46 | 0.63 | 0.90 | 0.89 | 2.86 | 140054 | 5587 | 63 | 4469 | 311 | 0 | 0 | logfile |
✔ | 6VWM | 21421 | 2024-04-14 | 2020-02-20 | 3.4 | 3.74 | — | 3.2 | 0.003 | 0.59 | 0.0 | 0.03 | 23.19 | 0.00 | 1.963 | 7.00 | 1.73 | 5.0 | 95.0 | 0.0 | -3.11 | 0.82 | 0.83 | 1.68 | 3.2 | 0.002 | 0.60 | 0.0 | 0.03 | 23.57 | 0.00 | 1.965 | 13.88 | 3.39 | 5.6 | 94.4 | 0.0 | -1.22 | 2.09 | 0.83 | 0.85 | 1.55 | 140044 | 5342 | 57 | 4580 | 53 | 0 | 0 | logfile |
✔ | 6VWN | 21422 | 2024-04-14 | 2020-02-20 | 3.4 | 3.71 | — | 3.2 | 0.002 | 0.58 | 0.0 | 0.03 | 23.32 | 0.00 | 1.951 | 7.12 | 3.85 | 4.3 | 95.7 | 0.0 | -3.14 | 0.83 | 0.82 | 1.13 | 3.2 | 0.003 | 0.60 | 0.0 | 0.03 | 23.63 | 0.00 | 1.862 | 15.41 | 3.57 | 5.7 | 94.3 | 0.0 | -1.20 | 1.22 | 0.84 | 0.86 | 1.12 | 140036 | 5341 | 57 | 4580 | 55 | 0 | 0 | logfile |
✘ | 6DR0 | 7987 | 2024-04-14 | 2018-06-11 | 4.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139988 | 8750 | 8 | 0 | 8 | 0 | 70013 | logfile |
✘ | 8B6C | 15863 | 2024-04-14 | 2022-09-26 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139959 | 6963 | 61 | 3890 | 184 | 0 | 0 | logfile |
✔ | 6o8W | 0656 | 2024-04-13 | 2019-03-12 | 3.53 | 4.07 | — | 3.6 | 0.011 | 1.07 | 2.0 | 0.05 | 22.95 | 0.01 | 2.100 | 5.95 | 0.50 | 14.6 | 85.2 | 0.2 | -4.56 | 0.80 | 0.75 | 1.33 | 3.6 | 0.005 | 0.66 | 1.0 | 0.04 | 23.11 | 0.00 | 2.013 | 13.71 | 3.97 | 10.8 | 89.1 | 0.1 | -2.41 | 1.66 | 0.87 | 0.84 | 1.03 | 139953 | 5206 | 55 | 4623 | 4 | 0 | 0 | logfile |
✔ | 8FL9 | 29271 | 2024-04-14 | 2022-12-21 | 2.75 | 2.91 | 2.83 | 3.0 | 0.008 | 0.79 | 0.0 | 0.04 | 22.11 | 0.03 | 1.913 | 2.47 | 0.00 | 1.9 | 98.1 | 0.0 | 0.50 | 0.83 | 0.83 | 3.59 | 3.0 | 0.006 | 0.78 | 0.0 | 0.04 | 22.42 | 0.01 | 1.870 | 7.32 | 2.44 | 2.8 | 97.2 | 0.0 | 0.60 | 0.49 | 0.83 | 0.86 | 3.34 | 139879 | 7690 | 65 | 3636 | 95 | 0 | 0 | logfile |
✔ | 7P7U | 13245 | 2024-04-13 | 2021-07-20 | 3.1 | 3.56 | 3.06 | 2.0 | 0.004 | 0.52 | 0.0 | 0.05 | 22.67 | 0.00 | 1.724 | 6.20 | 0.42 | 2.6 | 97.4 | 0.1 | 1.02 | 0.89 | 0.90 | 3.54 | 2.0 | 0.005 | 0.61 | 1.0 | 0.04 | 22.62 | 0.00 | 1.853 | 10.78 | 2.70 | 2.7 | 97.3 | 0.0 | 0.83 | 0.36 | 0.89 | 0.91 | 3.11 | 139826 | 5337 | 64 | 4549 | 344 | 0 | 0 | logfile |
✔ | 7M4Y | 23670 | 2024-04-13 | 2021-03-22 | 2.5 | 1.72 | — | 1.5 | 0.006 | 0.58 | 2.0 | 0.03 | 23.65 | 0.02 | 1.783 | 3.47 | 2.14 | 2.5 | 97.3 | 0.2 | 1.41 | 0.77 | 0.73 | 3.74 | 1.5 | 0.004 | 0.73 | 0.0 | 0.04 | 23.26 | 0.01 | 1.694 | 4.89 | 2.97 | 2.9 | 97.0 | 0.1 | 0.55 | 0.29 | 0.79 | 0.77 | 3.74 | 139817 | 5511 | 80 | 4453 | 200 | 1044 | 0 | logfile |
✔ | 8FKW | 29259 | 2024-04-14 | 2022-12-21 | 2.5 | 2.85 | 2.62 | 2.8 | 0.003 | 0.53 | 0.0 | 0.03 | 19.82 | 0.00 | 1.946 | 1.75 | 0.01 | 1.1 | 98.9 | 0.0 | 2.03 | 0.80 | 0.82 | 3.78 | 2.8 | 0.002 | 0.51 | 0.0 | 0.03 | 20.32 | 0.00 | 1.949 | 5.42 | 1.16 | 1.6 | 98.4 | 0.0 | 1.86 | 1.15 | 0.81 | 0.86 | 3.25 | 139783 | 10864 | 65 | 2499 | 63 | 0 | 0 | logfile |
✔ | 8UU4 | 42554 | 2024-04-13 | 2023-10-31 | 3.0 | 3.80 | 3.01 | 3.2 | 0.005 | 0.61 | 0.0 | 0.04 | 22.56 | 0.01 | 1.852 | 5.73 | 0.00 | 6.1 | 93.8 | 0.1 | -1.12 | 0.88 | 0.83 | 2.97 | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 22.62 | 0.00 | 1.030 | 10.84 | 2.35 | 6.4 | 93.5 | 0.1 | -0.87 | 1.75 | 0.93 | 0.92 | 2.08 | 139761 | 5407 | 66 | 4533 | 453 | 133 | 0 | logfile |
✘ | 6AB5 | 6999 | 2024-04-14 | 2018-07-20 | 3.7 | 3.79 | — | 3.7 | 0.007 | 0.96 | 6.0 | 0.06 | 11.27 | 0.01 | 1.686 | 24.89 | 0.75 | 5.6 | 94.4 | 0.0 | -3.80 | 0.85 | 0.86 | 3.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139740 | 18180 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FLC | 29274 | 2024-04-13 | 2022-12-21 | 2.76 | 2.78 | 2.87 | 2.9 | 0.007 | 0.76 | 0.0 | 0.03 | 22.17 | 0.03 | 1.975 | 2.57 | 0.00 | 1.5 | 98.5 | 0.0 | 0.65 | 0.82 | 0.82 | 3.53 | 2.9 | 0.008 | 0.86 | 0.0 | 0.04 | 22.58 | 0.01 | 1.857 | 7.50 | 2.84 | 3.1 | 96.9 | 0.0 | 0.46 | 1.19 | 0.83 | 0.86 | 3.33 | 139595 | 7626 | 65 | 3648 | 95 | 0 | 0 | logfile |
✘ | 7AM2 | 11821 | 2024-04-14 | 2020-10-07 | 3.4 | 3.52 | — | 3.4 | 0.009 | 0.95 | 43.0 | 0.07 | 21.09 | 0.01 | 1.157 | 23.90 | 8.65 | 15.0 | 84.3 | 0.7 | -5.47 | 0.64 | 0.76 | 1.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139523 | 15384 | 80 | 839 | 42 | 0 | 0 | logfile |
✘ | 6LQM | 0948 | 2024-04-13 | 2020-01-14 | 3.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139464 | 7108 | 53 | 3808 | 251 | 0 | 0 | logfile |
✔ | 7M4X | 23669 | 2024-04-13 | 2021-03-22 | 2.66 | 1.75 | — | 1.6 | 0.006 | 0.55 | 0.0 | 0.03 | 23.02 | 0.01 | 1.789 | 3.62 | 0.00 | 2.5 | 97.4 | 0.1 | 1.32 | 0.77 | 0.73 | 3.46 | 1.6 | 0.005 | 0.76 | 0.0 | 0.04 | 23.08 | 0.01 | 1.667 | 5.35 | 3.00 | 3.1 | 96.8 | 0.1 | 0.30 | 0.35 | 0.80 | 0.76 | 3.33 | 139446 | 5528 | 73 | 4453 | 194 | 552 | 0 | logfile |
✘ | 6DQS | 7983 | 2024-04-13 | 2018-06-11 | 4.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139314 | 8750 | 8 | 0 | 8 | 0 | 69639 | logfile |
✔ | 7RoD | 24592 | 2024-04-13 | 2021-07-30 | 3.8 | 4.39 | — | 3.9 | 0.004 | 0.70 | 0.0 | 0.05 | 11.72 | 0.01 | 2.388 | 12.51 | 0.00 | 4.3 | 95.7 | 0.0 | 2.79 | 0.69 | 0.87 | 2.22 | 4.0 | 0.004 | 0.79 | 0.0 | 0.04 | 14.47 | 0.01 | 2.204 | 10.61 | 1.87 | 6.1 | 93.9 | 0.0 | 3.23 | 0.51 | 0.70 | 0.87 | 1.68 | 139258 | 19082 | 203 | 0 | 0 | 0 | 0 | logfile |
✘ | 6DRA | 7991 | 2024-04-13 | 2018-06-11 | 3.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139084 | 8764 | 8 | 0 | 12 | 0 | 69544 | logfile |