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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8BPo | 16155 | 2024-04-15 | 2022-11-17 | 2.8 | 2.66 | 2.77 | 2.8 | 0.004 | 0.85 | 0.0 | 0.04 | 23.11 | 0.01 | 1.912 | 3.73 | 0.03 | 3.4 | 96.6 | 0.0 | -2.01 | 0.76 | 0.85 | 3.72 | 2.8 | 0.008 | 0.77 | 0.0 | 0.05 | 23.55 | 0.01 | 1.060 | 8.05 | 3.48 | 4.1 | 95.8 | 0.0 | -0.37 | 0.93 | 0.78 | 0.90 | 3.67 | 143326 | 7606 | 64 | 3814 | 246 | 0 | 0 | logfile |
✘ | 6LQM | 0948 | 2024-04-13 | 2020-01-14 | 3.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139464 | 7108 | 53 | 3808 | 251 | 0 | 0 | logfile |
✘ | 8iE3 | 35375 | 2024-04-16 | 2023-02-15 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 145205 | 7863 | 48 | 3795 | 0 | 0 | 0 | logfile |
✘ | 8oJ8 | 16908 | 2024-04-16 | 2023-03-24 | 3.3 | 3.75 | 3.22 | 3.3 | 0.002 | 0.39 | 0.0 | 0.03 | 22.12 | 0.00 | 1.849 | 3.71 | 0.09 | 2.3 | 97.6 | 0.0 | 2.20 | 0.86 | 0.86 | 2.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 144625 | 7861 | 64 | 3783 | 225 | 0 | 0 | logfile |
✔ | 7QWR | 14192 | 2024-04-11 | 2022-01-25 | 2.9 | 2.44 | — | 2.9 | 0.002 | 0.47 | 0.0 | 0.03 | 22.87 | 0.00 | 2.054 | 7.58 | 0.72 | 5.1 | 94.8 | 0.1 | -0.61 | 0.48 | 0.71 | 2.26 | 2.7 | 0.008 | 0.94 | 0.0 | 0.05 | 24.15 | 0.01 | 1.795 | 9.20 | 6.93 | 7.3 | 92.6 | 0.1 | -1.29 | 1.42 | 0.53 | 0.82 | 2.98 | 134576 | 6621 | 55 | 3769 | 126 | 0 | 0 | logfile |
✔ | 7QWS | 14193 | 2024-04-12 | 2022-01-25 | 3.4 | 3.09 | — | 7.2 | 0.002 | 0.46 | 0.0 | 0.03 | 22.90 | 0.00 | 2.011 | 9.44 | 1.65 | 3.7 | 96.3 | 0.0 | 0.47 | 0.23 | 0.02 | -0.02 | 3.0 | 0.004 | 0.88 | 0.0 | 0.04 | 24.72 | 0.01 | 0.987 | 26.15 | 2.43 | 8.3 | 91.7 | 0.1 | -2.38 | 2.16 | 0.52 | 0.59 | 0.52 | 137913 | 7047 | 55 | 3769 | 126 | 0 | 0 | logfile |
✔ | 6HD7 | 0202 | 2024-04-14 | 2018-08-17 | 3.4 | 3.54 | — | 3.3 | 0.002 | 0.43 | 0.0 | 0.03 | 22.25 | 0.00 | 0.345 | 24.96 | 0.08 | 11.1 | 87.1 | 1.9 | -3.26 | 0.66 | 0.65 | 0.74 | 3.3 | 0.009 | 0.85 | 0.0 | 0.05 | 23.56 | 0.01 | 1.962 | 19.94 | 4.29 | 7.8 | 91.8 | 0.4 | -1.43 | 1.91 | 0.76 | 0.88 | 1.82 | 141153 | 7514 | 52 | 3767 | 234 | 0 | 0 | logfile |
✘ | 6LSR | 0963 | 2024-04-14 | 2020-01-20 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 141172 | 7581 | 57 | 3757 | 246 | 7 | 0 | logfile |
✘ | 6LU8 | 0978 | 2024-04-16 | 2020-01-26 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 143909 | 7778 | 66 | 3753 | 247 | 16 | 0 | logfile |
✘ | 6LSS | 0964 | 2024-04-14 | 2020-01-20 | 3.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 140545 | 7369 | 67 | 3750 | 250 | 16 | 0 | logfile |
✘ | 8oJ5 | 16905 | 2024-04-16 | 2023-03-23 | 2.9 | 3.02 | 2.75 | 2.6 | 0.002 | 0.33 | 0.0 | 0.03 | 22.00 | 0.00 | 1.833 | 2.23 | 0.39 | 1.4 | 98.6 | 0.0 | 2.44 | 0.85 | 0.88 | 3.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 145041 | 8000 | 61 | 3742 | 225 | 0 | 0 | logfile |
✔ | 6R87 | 4753 | 2024-04-11 | 2019-03-31 | 3.4 | 3.50 | — | 3.4 | 0.012 | 1.28 | 1.0 | 0.07 | 23.20 | 0.01 | 0.981 | 6.00 | 0.66 | 8.3 | 91.4 | 0.3 | -3.94 | 0.82 | 0.85 | 3.15 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 22.88 | 0.00 | 1.892 | 13.14 | 4.04 | 7.7 | 92.1 | 0.2 | -1.30 | 1.24 | 0.82 | 0.86 | 2.21 | 135255 | 7197 | 50 | 3671 | 41 | 0 | 0 | logfile |
✔ | 6R84 | 4751 | 2024-04-13 | 2019-03-31 | 3.6 | 3.57 | — | 3.5 | 0.009 | 1.15 | 1.0 | 0.06 | 22.99 | 0.01 | 1.501 | 5.84 | 0.51 | 8.2 | 91.4 | 0.4 | -3.93 | 0.79 | 0.81 | 2.51 | 3.5 | 0.005 | 0.80 | 5.0 | 0.04 | 23.04 | 0.01 | 1.880 | 15.98 | 4.75 | 8.3 | 91.5 | 0.2 | -1.66 | 1.97 | 0.80 | 0.83 | 1.70 | 138804 | 7644 | 51 | 3671 | 45 | 0 | 0 | logfile |
✔ | 8FLC | 29274 | 2024-04-13 | 2022-12-21 | 2.76 | 2.78 | 2.87 | 2.9 | 0.007 | 0.76 | 0.0 | 0.03 | 22.17 | 0.03 | 1.975 | 2.57 | 0.00 | 1.5 | 98.5 | 0.0 | 0.65 | 0.82 | 0.82 | 3.53 | 2.9 | 0.008 | 0.86 | 0.0 | 0.04 | 22.58 | 0.01 | 1.857 | 7.50 | 2.84 | 3.1 | 96.9 | 0.0 | 0.46 | 1.19 | 0.83 | 0.86 | 3.33 | 139595 | 7626 | 65 | 3648 | 95 | 0 | 0 | logfile |
✘ | 8FLE | 29276 | 2024-04-16 | 2022-12-21 | 2.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 144139 | 8150 | 66 | 3646 | 93 | 0 | 0 | logfile |
✔ | 8FL9 | 29271 | 2024-04-14 | 2022-12-21 | 2.75 | 2.91 | 2.83 | 3.0 | 0.008 | 0.79 | 0.0 | 0.04 | 22.11 | 0.03 | 1.913 | 2.47 | 0.00 | 1.9 | 98.1 | 0.0 | 0.50 | 0.83 | 0.83 | 3.59 | 3.0 | 0.006 | 0.78 | 0.0 | 0.04 | 22.42 | 0.01 | 1.870 | 7.32 | 2.44 | 2.8 | 97.2 | 0.0 | 0.60 | 0.49 | 0.83 | 0.86 | 3.34 | 139879 | 7690 | 65 | 3636 | 95 | 0 | 0 | logfile |
✔ | 7ZS5 | 14926 | 2024-04-10 | 2022-05-06 | 3.2 | 3.53 | 3.32 | 3.3 | 0.002 | 0.55 | 0.0 | 0.03 | 22.99 | 0.00 | 1.329 | 12.45 | 0.02 | 2.5 | 97.1 | 0.4 | -1.60 | 0.84 | 0.78 | 1.80 | 3.3 | 0.005 | 0.69 | 0.0 | 0.04 | 23.01 | 0.00 | 1.916 | 16.74 | 3.50 | 8.5 | 91.1 | 0.4 | -1.55 | 0.37 | 0.86 | 0.82 | 1.67 | 127849 | 6416 | 50 | 3603 | 24 | 0 | 0 | logfile |
✔ | 8FLF | 29277 | 2024-04-11 | 2022-12-21 | 2.65 | 2.77 | 2.75 | 2.9 | 0.007 | 0.77 | 0.0 | 0.04 | 22.21 | 0.03 | 1.925 | 1.99 | 0.00 | 1.6 | 98.4 | 0.0 | 0.65 | 0.82 | 0.84 | 4.10 | 2.9 | 0.007 | 0.82 | 0.0 | 0.04 | 22.55 | 0.01 | 1.823 | 5.54 | 2.95 | 2.7 | 97.3 | 0.0 | 0.37 | 1.16 | 0.83 | 0.87 | 3.71 | 134730 | 7133 | 64 | 3599 | 93 | 0 | 0 | logfile |
✔ | 5GAK | 3227 | 2024-04-10 | 2015-12-09 | 3.88 | 4.13 | — | 19.0 | 0.006 | 0.94 | 0.0 | 0.06 | 25.75 | 0.01 | 0.816 | 23.89 | 0.26 | 9.2 | 90.2 | 0.7 | -3.81 | 0.21 | 0.02 | 0.28 | 3.9 | 0.003 | 0.77 | 0.0 | 0.04 | 24.43 | 0.00 | 1.986 | 20.92 | 2.20 | 8.8 | 90.9 | 0.4 | -2.53 | 1.95 | 0.33 | 0.23 | 0.18 | 128975 | 6434 | 50 | 3597 | 234 | 0 | 0 | logfile |
✔ | 8BJQ | 16090 | 2024-04-14 | 2022-11-05 | 3.8 | 4.31 | 3.77 | 3.7 | 0.005 | 0.69 | 1.0 | 0.04 | 22.02 | 0.01 | 1.017 | 13.25 | 0.16 | 4.4 | 95.4 | 0.2 | -0.16 | 0.72 | 0.78 | 0.75 | 3.7 | 0.005 | 0.72 | 2.0 | 0.04 | 22.58 | 0.01 | 1.077 | 21.72 | 3.76 | 6.0 | 93.9 | 0.1 | -0.57 | 1.66 | 0.74 | 0.85 | 0.88 | 141384 | 8086 | 64 | 3580 | 211 | 0 | 0 | logfile |