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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8DBX | 27316 | 2024-04-09 | 2022-06-14 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16968 | 1998 | 12 | 0 | 10 | 914 | 0 | logfile |
✘ | 7M3N | 23658 | 2024-04-05 | 2021-03-18 | 2.4 | 2.15 | 2.40 | 1.9 | 0.005 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.168 | 5.79 | 4.28 | 4.3 | 95.6 | 0.1 | -2.53 | 0.43 | 0.82 | 4.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6004 | 759 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7EU3 | 31307 | 2024-04-16 | 2021-05-15 | 3.7 | 3.95 | — | 3.9 | 0.005 | 0.88 | 1.0 | 0.05 | 14.84 | 0.01 | 1.818 | 12.64 | 0.05 | 15.0 | 84.6 | 0.5 | -4.98 | 0.63 | 0.76 | 1.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40775 | 5338 | 28 | 0 | 66 | 0 | 0 | logfile |
✘ | 7WPA | 32680 | 2024-04-14 | 2022-01-23 | 2.77 | 2.26 | — | 2.1 | 0.004 | 0.78 | 2.0 | 0.05 | 13.93 | 0.01 | 2.327 | 3.39 | 0.45 | 5.4 | 94.5 | 0.0 | -4.08 | 0.72 | 0.73 | 2.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30444 | 3774 | 20 | 0 | 47 | 0 | 0 | logfile |
✘ | 8APK | 15573 | 2024-04-10 | 2022-08-09 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126493 | 7873 | 61 | 0 | 36 | 0 | 62392 | logfile |
✘ | 7PE7 | 13347 | 2024-04-06 | 2021-08-09 | 3.41 | 3.76 | — | 3.7 | 0.002 | 0.46 | 0.0 | 0.04 | 9.06 | 0.00 | 2.205 | 4.36 | 0.98 | 3.3 | 96.6 | 0.1 | -0.02 | 0.78 | 0.80 | 1.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 58582 | 7664 | 16 | 0 | 6 | 0 | 0 | logfile |
✘ | 6KiF | 9994 | 2024-04-16 | 2019-07-18 | 3.3 | 3.42 | — | 3.3 | 0.010 | 1.31 | 0.0 | 0.06 | 19.92 | 0.01 | 2.205 | 9.06 | 0.03 | 2.9 | 97.1 | 0.0 | -2.65 | 0.72 | 0.74 | 2.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 144312 | 13395 | 114 | 0 | 843 | 54 | 0 | logfile |
✘ | 7YCA | 33737 | 2024-04-07 | 2022-07-01 | 2.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64832 | 5632 | 60 | 0 | 450 | 4 | 0 | logfile |
✘ | 6LY5 | 30012 | 2024-04-12 | 2020-02-13 | 2.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 81344 | 6510 | 76 | 0 | 723 | 153 | 0 | logfile |
✘ | 7KRR | 23011 | 2024-04-13 | 2020-11-20 | 3.5 | 3.55 | — | 3.4 | 0.016 | 1.97 | 18.0 | 0.15 | 14.46 | 0.01 | 1.621 | 7.32 | 2.53 | 7.1 | 92.1 | 0.8 | -2.17 | 0.81 | 0.80 | 3.20 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27192 | 3310 | 35 | 0 | 95 | 0 | 0 | logfile |
✘ | 8AP7 | 15560 | 2024-04-11 | 2022-08-09 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 71474 | 4076 | 58 | 0 | 44 | 24 | 33618 | logfile |
✘ | 8SoK | 40660 | 2024-04-16 | 2023-04-28 | 4.1 | 4.25 | 4.03 | 4.0 | 0.005 | 0.76 | 0.0 | 0.09 | 13.71 | 0.01 | 2.084 | 5.31 | 1.02 | 9.8 | 89.7 | 0.6 | -3.40 | 0.77 | 0.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37162 | 2335 | 8 | 10 | 2 | 0 | 18588 | logfile |
✘ | 8FC8 | 28976 | 2024-04-16 | 2022-12-01 | 3.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39152 | 2468 | 8 | 0 | 8 | 0 | 19384 | logfile |
✘ | 8D85 | 27247 | 2024-04-06 | 2022-06-07 | 3.81 | 4.26 | 4.04 | 4.2 | 0.003 | 0.53 | 0.0 | 0.04 | 19.55 | 0.00 | 2.357 | 4.77 | 0.00 | 4.1 | 95.8 | 0.1 | -2.45 | 0.68 | 0.64 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7093 | 865 | 10 | 0 | 11 | 0 | 0 | logfile |
✘ | 7ZDG | 14645 | 2024-04-06 | 2022-03-29 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9007 | 1157 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 8APH | 15571 | 2024-04-10 | 2022-08-09 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126490 | 7873 | 60 | 0 | 36 | 0 | 62387 | logfile |
✘ | 8APA | 15563 | 2024-04-10 | 2022-08-09 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126495 | 7873 | 60 | 0 | 36 | 0 | 62392 | logfile |
✘ | 8D7R | 27231 | 2024-04-07 | 2022-06-07 | 3.9 | 4.13 | 3.91 | 4.0 | 0.003 | 0.54 | 0.0 | 0.04 | 15.03 | 0.00 | 2.345 | 5.62 | 0.00 | 8.1 | 91.9 | 0.0 | -3.25 | 0.60 | 0.56 | 0.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9627 | 1167 | 12 | 0 | 16 | 0 | 0 | logfile |
✘ | 8SET | 40428 | 2024-04-15 | 2023-04-10 | 3.42 | 4.38 | 3.59 | 3.3 | 0.006 | 1.03 | 0.0 | 0.06 | 14.78 | 0.01 | 2.173 | 5.88 | 2.98 | 3.0 | 96.9 | 0.1 | -0.29 | 0.85 | 0.80 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 143048 | 17940 | 12 | 0 | 8 | 0 | 0 | logfile |
✘ | 8SER | 40426 | 2024-04-15 | 2023-04-10 | 3.42 | 4.59 | 3.60 | 3.3 | 0.005 | 0.99 | 4.0 | 0.06 | 14.47 | 0.01 | 2.178 | 5.10 | 2.55 | 4.2 | 95.7 | 0.1 | -0.36 | 0.89 | 0.85 | 1.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 142952 | 17932 | 12 | 0 | 8 | 0 | 0 | logfile |