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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8A7T | 15225 | 2024-04-05 | 2022-06-21 | 3.0 | 2.93 | 3.07 | 3.2 | 0.003 | 0.46 | 0.0 | 0.04 | 8.48 | 0.00 | 2.302 | 5.04 | 0.00 | 2.8 | 97.2 | 0.0 | -4.48 | 0.39 | 0.85 | 4.72 | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 15.85 | 0.00 | 2.226 | 8.96 | 4.29 | 3.5 | 96.5 | 0.0 | -4.03 | 1.15 | 0.43 | 0.89 | 4.90 | 3702 | 444 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UF7 | 42185 | 2024-04-05 | 2023-10-03 | 3.2 | 2.40 | 3.23 | 2.0 | 0.005 | 0.70 | 0.0 | 0.05 | 18.21 | 0.01 | 2.204 | 18.82 | 0.89 | 12.8 | 86.6 | 0.6 | -2.23 | 0.68 | 0.67 | 1.77 | 2.1 | 0.005 | 0.72 | 0.0 | 0.04 | 18.48 | 0.01 | 2.183 | 20.12 | 8.05 | 13.6 | 85.8 | 0.6 | -2.20 | 1.11 | 0.68 | 0.67 | 1.40 | 3927 | 514 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QSN | 18637 | 2024-04-05 | 2023-10-10 | 3.54 | 4.23 | 3.52 | 4.0 | 0.002 | 0.48 | 0.0 | 0.03 | 10.37 | 0.00 | 2.269 | 4.15 | 3.75 | 3.5 | 96.5 | 0.0 | 2.22 | 0.55 | 0.76 | 0.70 | 4.0 | 0.003 | 0.87 | 0.0 | 0.04 | 15.50 | 0.00 | 2.062 | 16.31 | 2.68 | 3.5 | 96.5 | 0.0 | 1.78 | 1.45 | 0.56 | 0.77 | 1.37 | 3579 | 464 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oL6 | 16952 | 2024-04-05 | 2023-03-30 | 3.8 | 3.75 | 2.68 | 3.8 | 0.004 | 0.56 | 0.0 | 0.05 | 9.68 | 0.00 | 2.255 | 9.57 | 0.00 | 3.4 | 96.6 | 0.0 | -2.28 | 0.46 | 0.86 | 5.96 | 3.8 | 0.004 | 0.60 | 0.0 | 0.05 | 15.99 | 0.00 | 2.321 | 11.74 | 9.57 | 7.2 | 92.4 | 0.3 | -2.62 | 1.13 | 0.45 | 0.86 | 4.11 | 2260 | 310 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oRM | 17129 | 2024-04-05 | 2023-04-14 | 1.9 | 1.83 | 1.88 | 1.9 | 0.004 | 0.58 | 0.0 | 0.04 | 16.75 | 0.00 | 2.236 | 3.99 | 0.90 | 1.6 | 98.2 | 0.2 | 1.88 | 0.70 | 0.81 | 5.96 | 1.9 | 0.006 | 0.74 | 0.0 | 0.05 | 16.77 | 0.01 | 2.162 | 6.33 | 1.44 | 1.1 | 98.7 | 0.2 | 1.06 | 0.19 | 0.71 | 0.83 | 5.85 | 5341 | 632 | 7 | 0 | 2 | 210 | 0 | logfile |
✘ | 7YNF | 33960 | 2024-04-05 | 2022-07-30 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2988 | 378 | 9 | 0 | 8 | 0 | 0 | logfile |
✔ | 8GMU | 34154 | 2024-04-05 | 2022-08-22 | 2.78 | 2.51 | 2.71 | 2.7 | 0.003 | 0.55 | 0.0 | 0.04 | 19.47 | 0.00 | 1.941 | 8.36 | 1.73 | 1.8 | 98.0 | 0.3 | 1.01 | 0.46 | 0.82 | 2.96 | 2.7 | 0.002 | 0.48 | 0.0 | 0.04 | 19.40 | 0.00 | 1.956 | 6.75 | 2.20 | 1.3 | 98.6 | 0.1 | 1.24 | 1.22 | 0.45 | 0.82 | 2.92 | 6214 | 797 | 6 | 6 | 4 | 0 | 0 | logfile |
✔ | 6M7D | 30129 | 2024-04-05 | 2020-03-18 | 2.9 | 2.82 | — | 2.8 | 0.010 | 1.03 | 0.0 | 0.07 | 14.95 | 0.00 | 2.157 | 15.48 | 0.58 | 2.4 | 97.6 | 0.0 | -0.46 | 0.35 | 0.86 | 4.08 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 16.36 | 0.00 | 2.241 | 9.20 | 1.46 | 1.5 | 98.5 | 0.0 | 2.18 | 0.82 | 0.34 | 0.88 | 2.95 | 3280 | 412 | 2 | 6 | 0 | 0 | 0 | logfile |
✔ | 7ZJ2 | 14739 | 2024-04-05 | 2022-04-08 | 3.32 | 3.56 | — | 3.6 | 0.014 | 2.21 | 0.0 | 0.08 | 15.29 | 0.01 | 2.548 | 0.00 | 0.00 | 2.3 | 97.7 | 0.0 | -3.75 | 0.47 | 0.78 | 4.64 | 3.6 | 0.007 | 0.75 | 0.0 | 0.03 | 16.74 | 0.00 | 2.133 | 17.07 | 8.91 | 3.9 | 96.1 | 0.0 | -3.48 | 1.43 | 0.43 | 0.76 | 4.95 | 3792 | 540 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XCT | 38254 | 2024-04-05 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.004 | 0.54 | 0.0 | 0.04 | 16.84 | 0.00 | 2.175 | 5.27 | 1.76 | 3.6 | 96.1 | 0.2 | 1.37 | 1.56 | 0.43 | 0.89 | 4.05 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 7QVC | 14174 | 2024-04-05 | 2022-01-21 | 2.64 | 2.62 | 2.62 | 2.6 | 0.012 | 2.09 | 10.0 | 0.12 | 15.49 | 0.01 | 2.525 | 0.00 | 0.53 | 5.8 | 94.2 | 0.0 | -2.45 | 0.43 | 0.86 | 7.41 | 2.7 | 0.005 | 0.74 | 0.0 | 0.06 | 18.06 | 0.00 | 2.133 | 9.23 | 4.23 | 5.5 | 94.5 | 0.0 | -2.30 | 1.00 | 0.42 | 0.89 | 5.81 | 3255 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iVA | 35755 | 2024-04-05 | 2023-03-26 | 3.95 | 4.14 | 4.54 | 4.1 | 0.006 | 0.97 | 0.0 | 0.07 | 13.80 | 0.01 | 2.302 | 5.49 | 0.54 | 7.4 | 92.6 | 0.0 | -4.03 | 0.61 | 0.70 | 2.37 | 4.1 | 0.004 | 0.76 | 0.0 | 0.05 | 16.65 | 0.00 | 2.213 | 12.41 | 5.07 | 7.2 | 92.8 | 0.0 | -2.25 | 0.99 | 0.72 | 0.84 | 1.83 | 5029 | 648 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 6ZLV | 11275 | 2024-04-05 | 2020-07-01 | 3.5 | 3.60 | — | 3.5 | 0.011 | 1.86 | 4.0 | 0.12 | 12.22 | 0.01 | 2.221 | 19.37 | 2.72 | 3.7 | 95.7 | 0.6 | -1.53 | 0.54 | 0.79 | 1.09 | 3.5 | 0.004 | 0.75 | 0.0 | 0.05 | 15.10 | 0.00 | 2.151 | 13.75 | 2.55 | 2.6 | 97.4 | 0.0 | 0.23 | 1.52 | 0.54 | 0.78 | 1.93 | 5352 | 704 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UAK | 26427 | 2024-04-05 | 2022-03-13 | 3.38 | 3.45 | 2.13 | 3.6 | 0.003 | 0.70 | 0.0 | 0.05 | 13.75 | 0.00 | 2.407 | 13.48 | 0.00 | 14.4 | 85.6 | 0.0 | -2.82 | 0.31 | 0.67 | 2.41 | 3.6 | 0.004 | 0.71 | 0.0 | 0.05 | 17.15 | 0.00 | 2.293 | 6.45 | 4.92 | 19.2 | 80.8 | 0.0 | -3.49 | 0.62 | 0.36 | 0.76 | 1.84 | 2586 | 372 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TJX | 10514 | 2024-04-05 | 2019-11-27 | 3.0 | 3.21 | 2.52 | 3.4 | 0.011 | 1.10 | 0.0 | 0.07 | 9.93 | 0.01 | 2.312 | 4.11 | 0.00 | 4.8 | 95.2 | 0.0 | -3.93 | 0.43 | 0.79 | 4.74 | 3.3 | 0.006 | 0.82 | 0.0 | 0.06 | 14.65 | 0.00 | 2.265 | 7.81 | 4.26 | 6.5 | 93.5 | 0.0 | -3.42 | 2.44 | 0.43 | 0.84 | 3.98 | 4878 | 642 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oo9 | 17007 | 2024-04-05 | 2023-04-04 | 3.2 | 2.32 | 3.17 | 3.1 | 0.010 | 1.70 | 0.0 | 0.06 | 20.61 | 0.01 | 1.879 | 4.84 | 0.00 | 2.3 | 97.7 | 0.0 | -2.21 | 0.81 | 0.78 | 3.72 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 21.94 | 0.00 | 1.615 | 10.38 | 2.27 | 2.1 | 97.9 | 0.0 | -0.46 | 1.38 | 0.83 | 0.81 | 2.81 | 4516 | 439 | 4 | 42 | 3 | 0 | 0 | logfile |
✔ | 7oZH | 13124 | 2024-04-05 | 2021-06-28 | 3.02 | 3.20 | 1.84 | 3.3 | 0.024 | 1.40 | 0.0 | 0.09 | 7.44 | 0.01 | 2.546 | 14.72 | 0.00 | 5.4 | 94.6 | 0.0 | -2.78 | 0.33 | 0.60 | 4.68 | 3.3 | 0.006 | 0.75 | 0.0 | 0.05 | 14.93 | 0.00 | 2.349 | 18.36 | 7.95 | 10.5 | 89.5 | 0.0 | -2.51 | 2.50 | 0.39 | 0.69 | 1.00 | 3890 | 580 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y6K | 33642 | 2024-04-05 | 2022-06-20 | 3.34 | 3.42 | 3.31 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 14.23 | 0.01 | 2.222 | 15.89 | 0.57 | 4.9 | 95.1 | 0.0 | -1.02 | 0.70 | 0.79 | 2.98 | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 15.36 | 0.00 | 2.095 | 16.13 | 4.14 | 4.6 | 95.4 | 0.0 | -0.60 | 1.83 | 0.71 | 0.82 | 3.08 | 6363 | 834 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 8HKU | 34860 | 2024-04-05 | 2022-11-28 | 2.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✔ | 8SEL | 40421 | 2024-04-05 | 2023-04-10 | 3.8 | 4.20 | 3.61 | 4.2 | 0.026 | 2.25 | 0.0 | 0.13 | 12.89 | 0.01 | 2.474 | 1.85 | 0.00 | 4.3 | 92.8 | 2.9 | -1.59 | 0.59 | 0.73 | 3.09 | 4.1 | 0.005 | 1.00 | 0.0 | 0.06 | 18.09 | 0.00 | 2.287 | 24.93 | 6.96 | 15.7 | 84.3 | 0.0 | -3.44 | 2.57 | 0.53 | 0.70 | 1.94 | 5500 | 730 | 20 | 0 | 0 | 0 | 0 | logfile |