The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6GJ1 | 0009 | 2024-04-08 | 2018-05-15 | 4.7 | 4.83 | — | 4.4 | 0.010 | 1.51 | 5.0 | 0.07 | 11.65 | 0.01 | 0.341 | 23.90 | 0.72 | 18.3 | 81.3 | 0.4 | -5.15 | 0.83 | 0.71 | — | 4.4 | 0.004 | 0.91 | 0.0 | 0.05 | 12.88 | 0.01 | 2.123 | 26.89 | 0.14 | 19.3 | 80.6 | 0.1 | -3.97 | 1.15 | 0.86 | 0.78 | — | 13013 | 1638 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KVE | 23048 | 2024-04-07 | 2020-11-27 | 3.3 | 3.69 | 3.38 | 3.6 | 0.005 | 0.82 | 2.0 | 0.05 | 14.67 | 0.00 | 2.204 | 17.32 | 0.57 | 18.2 | 81.4 | 0.4 | -5.88 | 0.75 | 0.73 | 2.61 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 16.45 | 0.00 | 2.169 | 12.44 | 3.18 | 13.0 | 87.0 | 0.0 | -4.00 | 1.20 | 0.75 | 0.74 | 2.08 | 11142 | 1374 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7o7R | 12754 | 2024-04-16 | 2021-04-13 | 3.9 | 4.51 | — | 4.3 | 0.013 | 1.33 | 8.0 | 0.07 | 16.90 | 0.01 | 1.912 | 20.97 | 1.07 | 18.3 | 81.4 | 0.3 | -5.78 | 0.83 | 0.75 | 0.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40530 | 5126 | 16 | 0 | 40 | 0 | 0 | logfile |
✔ | 7KVF | 23049 | 2024-04-07 | 2020-11-28 | 3.6 | 4.39 | 3.76 | 3.6 | 0.005 | 0.82 | 2.0 | 0.05 | 14.67 | 0.00 | 2.204 | 17.32 | 0.57 | 18.2 | 81.4 | 0.4 | -5.88 | 0.82 | 0.66 | 1.37 | 3.6 | 0.004 | 0.81 | 0.0 | 0.05 | 16.23 | 0.01 | 2.129 | 21.92 | 2.37 | 14.7 | 85.3 | 0.0 | -3.73 | 2.39 | 0.87 | 0.77 | 0.95 | 11142 | 1374 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RAZ | 4788 | 2024-04-16 | 2019-04-08 | 4.46 | 4.58 | 4.41 | 4.5 | 0.011 | 1.60 | 29.0 | 0.14 | 18.70 | 0.01 | 1.308 | 23.33 | 6.20 | 17.7 | 81.4 | 1.0 | -5.70 | 0.65 | 0.65 | — | 4.5 | 0.003 | 0.85 | 0.0 | 0.05 | 15.72 | 0.01 | 2.066 | 16.95 | 0.07 | 12.0 | 88.0 | 0.0 | -3.22 | 1.56 | 0.66 | 0.64 | — | 38294 | 4764 | 18 | 23 | 6 | 0 | 0 | logfile |
✔ | 5WRG | 6679 | 2024-04-09 | 2016-12-01 | 4.3 | 4.45 | — | 4.3 | 0.007 | 1.40 | 0.0 | 0.07 | 12.06 | 0.01 | 2.191 | 9.91 | 0.53 | 18.0 | 81.4 | 0.7 | -5.05 | 0.66 | 0.69 | — | 4.3 | 0.004 | 0.97 | 0.0 | 0.05 | 12.23 | 0.00 | 2.031 | 18.59 | 0.00 | 17.4 | 82.5 | 0.1 | -3.27 | 1.52 | 0.68 | 0.75 | — | 16317 | 2208 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XLP | 6731 | 2024-04-07 | 2017-05-11 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.36 | 0.0 | 0.06 | 16.05 | 0.01 | 2.194 | 12.48 | 0.57 | 18.2 | 81.4 | 0.5 | -5.53 | 0.62 | 0.58 | — | 4.2 | 0.004 | 0.93 | 0.0 | 0.04 | 17.17 | 0.01 | 2.092 | 19.09 | 0.11 | 15.6 | 84.1 | 0.3 | -4.04 | 2.39 | 0.65 | 0.64 | — | 9952 | 1343 | 6 | 24 | 0 | 0 | 0 | logfile |
✔ | 6PiG | 20350 | 2024-04-13 | 2019-06-26 | 3.5 | 3.54 | 3.59 | 3.5 | 0.014 | 1.76 | 1.0 | 0.09 | 16.96 | 0.00 | 2.173 | 1.98 | 1.58 | 15.2 | 81.4 | 3.5 | -4.85 | 0.60 | 0.76 | 2.54 | 3.5 | 0.003 | 0.78 | 0.0 | 0.04 | 18.07 | 0.01 | 2.085 | 11.12 | 2.50 | 15.2 | 84.3 | 0.5 | -2.84 | 0.59 | 0.65 | 0.79 | 2.05 | 28867 | 3439 | 11 | 60 | 0 | 0 | 0 | logfile |
✔ | 7V47 | 31702 | 2024-04-05 | 2021-08-12 | 2.8 | 2.80 | — | 3.0 | 0.007 | 0.78 | 0.0 | 0.06 | 12.91 | 0.00 | 2.567 | 6.32 | 0.00 | 18.6 | 81.4 | 0.0 | -5.86 | 0.44 | 0.80 | 6.31 | 3.0 | 0.004 | 0.69 | 0.0 | 0.06 | 17.28 | 0.00 | 2.415 | 6.71 | 7.32 | 18.1 | 81.9 | 0.0 | -4.31 | 0.34 | 0.44 | 0.80 | 6.12 | 2484 | 366 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CB8 | 7449 | 2024-04-15 | 2018-02-02 | 3.8 | 4.11 | — | 4.7 | 0.006 | 0.84 | 0.0 | 0.05 | 11.71 | 0.01 | 1.542 | 37.90 | 0.00 | 18.6 | 81.4 | 0.0 | -5.72 | 0.54 | 0.27 | 0.20 | 4.0 | 0.004 | 0.75 | 0.0 | 0.04 | 15.82 | 0.01 | 1.853 | 19.01 | 2.68 | 9.9 | 90.1 | 0.0 | -2.79 | 2.65 | 0.72 | 0.67 | 0.46 | 100224 | 6210 | 27 | 0 | 27 | 0 | 50436 | logfile |
✔ | 5YFP | 6827 | 2024-04-15 | 2017-09-21 | 4.4 | 8.20 | — | 6.7 | 0.006 | 1.35 | 0.0 | 0.06 | 12.26 | 0.01 | 2.215 | 16.92 | 0.10 | 17.8 | 81.5 | 0.7 | -6.11 | 0.83 | 0.34 | — | 5.5 | 0.004 | 1.01 | 0.0 | 0.05 | 10.83 | 0.00 | 2.033 | 24.83 | 0.10 | 16.3 | 83.5 | 0.2 | -2.27 | 3.38 | 0.90 | 0.70 | — | 33096 | 5982 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TNF | 10531 | 2024-04-07 | 2019-12-07 | 3.8 | 2.90 | 3.67 | 2.7 | 0.032 | 1.64 | 0.0 | 0.32 | 18.93 | 0.01 | 2.236 | 8.40 | 0.00 | 17.8 | 81.5 | 0.7 | -5.32 | 0.60 | 0.56 | — | 2.6 | 0.006 | 1.19 | 0.0 | 0.10 | 15.66 | 0.01 | 2.088 | 17.70 | 0.00 | 21.3 | 78.6 | 0.1 | -4.12 | 0.55 | 0.65 | 0.64 | — | 9559 | 2206 | 5 | 0 | 66 | 0 | 0 | logfile |
✔ | 7D43 | 30568 | 2024-04-14 | 2020-09-22 | 4.3 | 4.40 | — | 4.3 | 0.006 | 0.99 | 0.0 | 0.05 | 14.62 | 0.01 | 2.018 | 28.49 | 0.31 | 18.3 | 81.6 | 0.1 | -6.11 | 0.83 | 0.79 | — | 4.3 | 0.005 | 0.78 | 0.0 | 0.05 | 13.78 | 0.00 | 2.076 | 20.03 | 0.00 | 11.9 | 88.0 | 0.0 | -2.53 | 1.57 | 0.83 | 0.78 | — | 31009 | 4347 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WUN | 21917 | 2024-04-07 | 2020-05-04 | 3.9 | 4.00 | — | 3.9 | 0.005 | 0.80 | 0.0 | 0.05 | 13.70 | 0.00 | 2.166 | 14.26 | 1.14 | 18.4 | 81.6 | 0.0 | -6.35 | 0.68 | 0.80 | 1.75 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 15.02 | 0.00 | 2.128 | 10.83 | 1.52 | 15.5 | 84.5 | 0.0 | -3.72 | 0.53 | 0.68 | 0.79 | 1.62 | 10082 | 1326 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WSC | 32753 | 2024-04-05 | 2022-01-28 | 3.78 | 4.01 | — | 4.0 | 0.013 | 1.67 | 5.0 | 0.10 | 15.34 | 0.01 | 1.600 | 41.09 | 4.99 | 14.7 | 81.6 | 3.6 | -4.09 | 0.65 | 0.78 | 2.33 | 4.0 | 0.005 | 0.85 | 0.0 | 0.05 | 16.53 | 0.01 | 2.143 | 21.38 | 6.65 | 12.8 | 86.7 | 0.5 | -2.74 | 1.23 | 0.64 | 0.78 | 1.89 | 3369 | 422 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6PYH | 20524 | 2024-04-08 | 2019-07-29 | 4.3 | 4.52 | — | 4.3 | 0.016 | 1.05 | 0.0 | 0.05 | 14.64 | 0.01 | 2.079 | 28.75 | 0.55 | 18.2 | 81.6 | 0.2 | -5.21 | 0.84 | 0.83 | — | 4.3 | 0.003 | 0.63 | 0.0 | 0.04 | 13.67 | 0.00 | 2.026 | 12.46 | 0.00 | 7.9 | 92.1 | 0.0 | -2.04 | 1.26 | 0.83 | 0.81 | — | 13187 | 1648 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HDD | 0204 | 2024-04-13 | 2018-08-17 | 4.5 | 5.28 | — | 4.4 | 0.009 | 1.36 | 3.0 | 0.08 | 12.60 | 0.01 | 2.220 | 12.08 | 1.07 | 18.3 | 81.6 | 0.1 | -6.11 | 0.74 | 0.42 | — | 10.0 | 0.005 | 1.02 | 0.0 | 0.05 | 13.60 | 0.01 | 1.496 | 26.71 | 0.00 | 17.2 | 82.6 | 0.2 | -3.09 | 5.60 | 0.87 | 0.55 | — | 28154 | 3605 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 5H1S | 9572 | 2024-04-13 | 2016-10-11 | 3.5 | 3.54 | — | 3.5 | 0.010 | 1.06 | 1.0 | 0.07 | 25.45 | 0.01 | 1.028 | 46.50 | 3.21 | 16.7 | 81.7 | 1.6 | -4.90 | 0.78 | 0.77 | 1.92 | 3.5 | 0.005 | 0.76 | 0.0 | 0.04 | 24.74 | 0.01 | 1.912 | 14.62 | 6.09 | 12.2 | 87.5 | 0.3 | -2.82 | 0.65 | 0.79 | 0.82 | 0.98 | 90825 | 3276 | 32 | 3018 | 0 | 0 | 0 | logfile |
✔ | 7FG2 | 31574 | 2024-04-07 | 2021-07-25 | 4.4 | 3.87 | — | 3.9 | 0.007 | 1.13 | 0.0 | 0.05 | 14.43 | 0.01 | 2.053 | 32.64 | 0.19 | 17.8 | 81.7 | 0.4 | -3.95 | 0.38 | 0.65 | — | 3.9 | 0.003 | 0.74 | 0.0 | 0.05 | 14.60 | 0.00 | 2.135 | 17.08 | 0.00 | 13.0 | 86.8 | 0.3 | -2.70 | 0.70 | 0.37 | 0.63 | — | 9342 | 1202 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oKS | 20103 | 2024-04-08 | 2019-04-15 | 4.2 | 4.44 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.05 | 17.36 | 0.01 | 2.299 | 5.88 | 9.80 | 18.3 | 81.7 | 0.0 | -5.50 | 0.78 | 0.81 | — | 4.3 | 0.003 | 0.81 | 0.0 | 0.04 | 14.55 | 0.01 | 2.130 | 12.79 | 0.00 | 13.9 | 86.1 | 0.0 | -4.90 | 2.21 | 0.79 | 0.82 | — | 13244 | 1610 | 14 | 0 | 0 | 0 | 0 | logfile |