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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DR1 | 27668 | 2024-03-24 | 2022-07-20 | 2.14 | 2.91 | 2.21 | 2.7 | 0.008 | 0.57 | 0.0 | 0.04 | 18.10 | 0.00 | 1.946 | 2.66 | 0.74 | 1.4 | 98.6 | 0.0 | 1.79 | 0.80 | 0.77 | 4.33 | 2.7 | 0.004 | 0.54 | 0.0 | 0.04 | 17.98 | 0.00 | 1.692 | 3.21 | 1.25 | 1.5 | 98.5 | 0.0 | 1.82 | 0.66 | 0.78 | 0.88 | 4.67 | 43630 | 2608 | 21 | 64 | 8 | 12 | 21631 | logfile |
✘ | 8ENM | 28273 | 2024-03-17 | 2022-09-30 | 2.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17722 | 1999 | 12 | 0 | 8 | 1693 | 0 | logfile |
✔ | 7S4H | 24826 | 2024-03-24 | 2021-09-08 | 2.14 | 2.27 | — | 2.3 | 0.009 | 1.03 | 3.0 | 0.05 | 22.83 | 0.00 | 1.502 | 14.45 | 2.83 | 4.8 | 94.9 | 0.2 | 0.71 | 0.77 | 0.85 | 4.94 | 2.2 | 0.006 | 0.71 | 0.0 | 0.05 | 20.65 | 0.01 | 1.952 | 7.89 | 2.33 | 5.0 | 94.6 | 0.4 | 0.83 | 0.59 | 0.81 | 0.92 | 5.20 | 22889 | 2577 | 27 | 0 | 63 | 410 | 0 | logfile |
✔ | 7RTB | 24680 | 2024-03-14 | 2021-08-12 | 2.14 | 2.32 | 2.23 | 2.3 | 0.003 | 0.57 | 0.0 | 0.04 | 14.48 | 0.00 | 2.277 | 5.37 | 0.77 | 1.6 | 98.4 | 0.0 | -0.80 | 0.64 | 0.69 | 3.38 | 2.3 | 0.005 | 0.66 | 0.0 | 0.04 | 16.95 | 0.00 | 2.201 | 5.31 | 2.99 | 3.2 | 96.8 | 0.0 | 0.82 | 0.67 | 0.68 | 0.83 | 3.90 | 8972 | 1169 | 7 | 0 | 0 | 1 | 0 | logfile |
✘ | 7ZZ6 | 15036 | 2024-03-11 | 2022-05-25 | 2.15 | 2.39 | 2.12 | 2.1 | 0.006 | 0.68 | 0.0 | 0.04 | 17.30 | 0.00 | 1.385 | 8.71 | 3.48 | 2.9 | 97.1 | 0.0 | 0.64 | 0.91 | 0.90 | 4.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8257 | 1017 | 6 | 0 | 6 | 157 | 0 | logfile |
✔ | 7PK6 | 13466 | 2024-03-14 | 2021-08-25 | 2.15 | 2.27 | 2.23 | 2.3 | 0.007 | 0.61 | 0.0 | 0.05 | 17.38 | 0.01 | 1.864 | 4.25 | 2.22 | 2.0 | 98.0 | 0.0 | 1.43 | 0.73 | 0.77 | 4.80 | 2.2 | 0.004 | 0.60 | 0.0 | 0.05 | 17.76 | 0.00 | 2.115 | 6.89 | 2.31 | 2.8 | 97.2 | 0.0 | 1.31 | 0.87 | 0.78 | 0.89 | 5.10 | 120580 | 15100 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A2Y | 15108 | 2024-03-16 | 2022-06-06 | 2.15 | 2.21 | 2.10 | 2.2 | 0.005 | 0.61 | 0.0 | 0.05 | 13.42 | 0.00 | 2.177 | 2.39 | 0.64 | 1.9 | 98.1 | 0.0 | -1.01 | 0.72 | 0.87 | 6.39 | 2.2 | 0.005 | 0.68 | 0.0 | 0.05 | 16.06 | 0.00 | 2.123 | 3.88 | 0.90 | 1.3 | 98.7 | 0.0 | 0.77 | 0.82 | 0.72 | 0.89 | 6.21 | 15078 | 1835 | 15 | 0 | 15 | 528 | 0 | logfile |
✔ | 8A2Z | 15109 | 2024-03-16 | 2022-06-06 | 2.15 | 2.27 | 2.11 | 2.2 | 0.004 | 0.58 | 0.0 | 0.04 | 11.91 | 0.00 | 2.190 | 1.81 | 0.00 | 2.1 | 97.7 | 0.3 | -1.13 | 0.74 | 0.87 | 6.56 | 2.2 | 0.002 | 0.59 | 0.0 | 0.04 | 15.55 | 0.00 | 2.045 | 4.07 | 0.90 | 1.8 | 98.2 | 0.0 | 1.14 | 1.46 | 0.74 | 0.89 | 5.89 | 15060 | 1830 | 15 | 0 | 10 | 570 | 0 | logfile |
✔ | 8BCM | 15966 | 2024-03-22 | 2022-10-17 | 2.15 | 2.26 | 2.26 | 2.3 | 0.005 | 0.67 | 0.0 | 0.05 | 16.84 | 0.01 | 2.070 | 8.09 | 0.85 | 2.8 | 97.0 | 0.2 | 0.91 | 0.72 | 0.88 | 5.18 | 2.3 | 0.003 | 0.60 | 0.0 | 0.04 | 16.72 | 0.00 | 2.176 | 8.98 | 1.39 | 2.5 | 97.5 | 0.0 | 1.15 | 0.22 | 0.73 | 0.89 | 4.73 | 33520 | 4216 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 7R4X | 14317 | 2024-03-17 | 2022-02-09 | 2.15 | 1.94 | — | 2.1 | 0.013 | 1.22 | 0.0 | 0.06 | 22.83 | 0.02 | 1.723 | 4.90 | 4.12 | 3.8 | 96.2 | 0.1 | -0.66 | 0.70 | 0.73 | 4.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 77936 | 4792 | 77 | 1646 | 174 | 4117 | 0 | logfile |
✔ | 7TF6 | 25863 | 2024-03-24 | 2022-01-06 | 2.15 | 2.26 | — | 2.3 | 0.002 | 0.51 | 0.0 | 0.04 | 16.47 | 0.00 | 2.048 | 4.68 | 1.34 | 3.7 | 96.3 | 0.0 | 0.26 | 0.48 | 0.71 | 5.34 | 2.3 | 0.002 | 0.48 | 0.0 | 0.04 | 17.09 | 0.00 | 1.896 | 13.30 | 1.34 | 4.4 | 95.6 | 0.0 | 0.72 | 0.34 | 0.71 | 0.87 | 5.50 | 43272 | 5400 | 36 | 0 | 24 | 0 | 120 | logfile |
✔ | 8i22 | 35129 | 2024-03-19 | 2023-01-13 | 2.15 | 2.49 | 2.17 | 2.4 | 0.006 | 0.69 | 0.0 | 0.06 | 17.82 | 0.00 | 2.236 | 8.42 | 0.65 | 3.9 | 95.9 | 0.2 | -0.28 | 0.80 | 0.86 | 4.96 | 2.4 | 0.004 | 0.58 | 0.0 | 0.05 | 17.38 | 0.00 | 2.174 | 6.38 | 0.87 | 3.5 | 96.1 | 0.4 | 0.00 | 0.41 | 0.76 | 0.87 | 4.90 | 25398 | 3180 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 8SQW | 40714 | 2024-03-25 | 2023-05-04 | 2.16 | 2.29 | 2.17 | 2.2 | 0.009 | 1.09 | 1.0 | 0.05 | 22.73 | 0.01 | 1.642 | 19.09 | 4.12 | 6.1 | 93.3 | 0.6 | 0.57 | 0.75 | 0.76 | 3.81 | 2.2 | 0.003 | 0.66 | 0.0 | 0.05 | 19.63 | 0.00 | 1.960 | 11.84 | 2.51 | 4.7 | 95.0 | 0.3 | 0.72 | 0.54 | 0.81 | 0.85 | 4.27 | 22850 | 2577 | 27 | 0 | 66 | 353 | 0 | logfile |
✔ | 7S4J | 24828 | 2024-03-24 | 2021-09-09 | 2.16 | 2.44 | — | 2.5 | 0.009 | 1.07 | 1.0 | 0.05 | 22.91 | 0.00 | 1.948 | 13.88 | 4.30 | 5.2 | 94.3 | 0.5 | 0.65 | 0.75 | 0.84 | 4.80 | 2.4 | 0.004 | 0.67 | 0.0 | 0.05 | 19.45 | 0.00 | 1.920 | 9.21 | 2.51 | 4.7 | 95.1 | 0.3 | 0.58 | 0.75 | 0.78 | 0.91 | 4.92 | 22780 | 2577 | 27 | 0 | 63 | 304 | 0 | logfile |
✔ | 8DLW | 27518 | 2024-03-21 | 2022-07-08 | 2.16 | 3.12 | 2.26 | 2.6 | 0.007 | 1.05 | 0.0 | 0.06 | 11.95 | 0.01 | 2.290 | 1.95 | 0.19 | 2.3 | 97.7 | 0.1 | 0.82 | 0.87 | 0.86 | 4.36 | 2.6 | 0.004 | 0.65 | 0.0 | 0.04 | 13.03 | 0.00 | 2.152 | 6.72 | 1.16 | 2.5 | 97.5 | 0.0 | 0.91 | 2.12 | 0.88 | 0.89 | 4.11 | 30267 | 3768 | 33 | 0 | 78 | 0 | 0 | logfile |
✔ | 8io8 | 35611 | 2024-03-15 | 2023-03-10 | 2.17 | 2.85 | 2.44 | 2.5 | 0.006 | 0.67 | 0.0 | 0.05 | 11.36 | 0.00 | 2.008 | 5.86 | 0.08 | 3.4 | 96.6 | 0.0 | 0.23 | 0.70 | 0.91 | 5.90 | 2.5 | 0.003 | 0.51 | 0.0 | 0.04 | 13.71 | 0.00 | 1.995 | 4.37 | 0.83 | 3.1 | 96.8 | 0.1 | 0.99 | 0.39 | 0.70 | 0.92 | 5.08 | 12596 | 1576 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8P5T | 17452 | 2024-03-26 | 2023-05-24 | 2.17 | 2.19 | 2.21 | 1.9 | 0.011 | 1.21 | 0.0 | 0.08 | 13.92 | 0.01 | 2.125 | 1.04 | 0.42 | 3.2 | 96.8 | 0.0 | -2.13 | 0.91 | 0.92 | 5.21 | 1.9 | 0.003 | 0.54 | 0.0 | 0.04 | 16.51 | 0.00 | 1.948 | 2.16 | 0.63 | 2.1 | 97.9 | 0.0 | 1.07 | 0.41 | 0.89 | 0.88 | 4.40 | 52590 | 6714 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 7NKJ | 12441 | 2024-03-25 | 2021-02-18 | 2.17 | 2.16 | — | 2.1 | 0.005 | 0.59 | 0.0 | 0.05 | 17.26 | 0.00 | 1.958 | 2.88 | 1.05 | 1.8 | 98.2 | 0.1 | 1.04 | 0.80 | 0.89 | 6.04 | 2.1 | 0.004 | 0.54 | 0.0 | 0.04 | 17.05 | 0.00 | 1.772 | 2.88 | 0.88 | 1.7 | 98.2 | 0.1 | 1.21 | 0.13 | 0.80 | 0.90 | 5.95 | 45605 | 2945 | 20 | 0 | 11 | 516 | 22478 | logfile |
✔ | 6KQK | 0753 | 2024-03-12 | 2019-08-18 | 2.17 | 3.14 | — | 2.8 | 0.018 | 1.17 | 12.0 | 0.06 | 16.50 | 0.00 | 1.876 | 11.30 | 0.00 | 7.4 | 92.6 | 0.0 | -4.38 | 0.82 | 0.84 | 4.45 | 2.8 | 0.004 | 0.74 | 4.0 | 0.12 | 15.32 | 0.00 | 1.722 | 9.97 | 0.59 | 5.0 | 95.0 | 0.0 | -0.08 | 0.80 | 0.82 | 0.86 | 4.03 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 8A2R | 15104 | 2024-03-16 | 2022-06-06 | 2.17 | 2.31 | 2.13 | 2.2 | 0.005 | 0.67 | 0.0 | 0.04 | 13.67 | 0.00 | 1.880 | 2.75 | 0.65 | 2.5 | 97.5 | 0.0 | -1.52 | 0.72 | 0.86 | 5.94 | 2.2 | 0.003 | 0.62 | 0.0 | 0.04 | 16.74 | 0.00 | 1.896 | 2.99 | 1.23 | 1.8 | 98.2 | 0.0 | 1.15 | 1.16 | 0.73 | 0.90 | 5.86 | 14990 | 1830 | 15 | 0 | 15 | 480 | 0 | logfile |