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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8GTP | 34261 | 2024-04-14 | 2022-09-08 | 3.1 | 3.47 | 3.25 | 3.4 | 0.009 | 1.09 | 1.0 | 0.08 | 13.84 | 0.01 | 1.912 | 19.57 | 4.36 | 7.8 | 89.5 | 2.7 | -3.18 | 0.69 | 0.71 | 1.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30249 | 3768 | 30 | 0 | 69 | 0 | 0 | logfile |
✘ | 8CBN | 16546 | 2024-04-08 | 2023-01-25 | 3.34 | 3.92 | 3.27 | 3.7 | 0.008 | 0.72 | 0.0 | 0.04 | 25.79 | 0.01 | 0.876 | 6.35 | 2.28 | 4.8 | 95.2 | 0.0 | -5.72 | 0.71 | 0.78 | 1.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13669 | 939 | 12 | 300 | 0 | 0 | 0 | logfile |
✘ | 7RiG | 24479 | 2024-04-14 | 2021-07-19 | 2.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32804 | 4128 | 12 | 0 | 22 | 278 | 0 | logfile |
✘ | 8G7N | 29817 | 2024-04-08 | 2023-02-16 | 2.7 | 2.83 | 2.69 | 2.8 | 0.003 | 0.57 | 0.0 | 0.05 | 13.36 | 0.00 | 2.109 | 2.56 | 0.20 | 1.0 | 99.0 | 0.0 | 1.66 | 0.77 | 0.85 | 3.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 66108 | 8778 | 42 | 0 | 42 | 0 | 0 | logfile |
✘ | 8oJ7 | 16907 | 2024-04-08 | 2023-03-24 | 2.46 | 1.79 | — | 2.5 | 0.011 | 1.42 | 1.0 | 0.08 | 18.84 | 0.02 | 1.665 | 4.05 | 0.00 | 3.1 | 96.8 | 0.1 | -1.25 | 0.83 | 0.86 | 4.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12026 | 1355 | 5 | 67 | 3 | 0 | 0 | logfile |
✘ | 7PM8 | 13524 | 2024-04-07 | 2021-09-02 | 3.5 | 3.91 | 3.50 | 3.4 | 0.004 | 0.88 | 1.0 | 0.05 | 15.70 | 0.01 | 1.316 | 6.40 | 0.09 | 0.3 | 99.7 | 0.0 | -1.60 | 0.90 | 0.83 | 2.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10149 | 1260 | 6 | 0 | 5 | 0 | 0 | logfile |
✘ | 8FWB | 29500 | 2024-04-15 | 2023-01-20 | 3.14 | 3.48 | 3.19 | 3.6 | 0.005 | 0.83 | 0.0 | 0.05 | 15.00 | 0.00 | 2.237 | 11.31 | 2.57 | 12.8 | 87.2 | 0.0 | -3.49 | 0.48 | 0.84 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35256 | 4572 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 8B6W | 15883 | 2024-04-16 | 2022-09-27 | 2.6 | 2.22 | 2.56 | 2.9 | 0.004 | 0.72 | 0.0 | 0.08 | 11.92 | 0.01 | 1.192 | 10.45 | 0.00 | 4.4 | 95.4 | 0.2 | -0.28 | 0.72 | 0.71 | 3.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 145299 | 9534 | 42 | 0 | 21 | 0 | 71274 | logfile |
✘ | 8JPo | 36485 | 2024-04-07 | 2023-06-12 | 3.4 | 3.43 | 3.16 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 12.94 | 0.00 | 2.267 | 6.38 | 0.00 | 2.8 | 97.2 | 0.0 | 0.44 | 0.75 | 0.90 | 3.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11476 | 1466 | 4 | 0 | 8 | 0 | 0 | logfile |
✘ | 8BVH | 16264 | 2024-04-16 | 2022-12-03 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38135 | 2256 | 23 | 41 | 8 | 0 | 18879 | logfile |
✘ | 8SA2 | 40262 | 2024-04-07 | 2023-03-31 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9268 | 0 | 4 | 420 | 2 | 0 | 0 | logfile |
✘ | 7EK1 | 31165 | 2024-04-05 | 2021-04-03 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -0.75 | — | — | 2.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53500 | 6720 | 20 | 0 | 0 | 0 | 0 | logfile |
✘ | 7N6B | 24206 | 2024-04-05 | 2021-06-08 | 2.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5942 | 757 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 8B3o | 15831 | 2024-04-10 | 2022-09-16 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8i79 | 35212 | 2024-04-12 | 2023-01-31 | 2.8 | 3.87 | 3.00 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 12.36 | 0.00 | 2.195 | 8.33 | 0.00 | 3.0 | 97.0 | 0.0 | 1.30 | 0.88 | 0.84 | 3.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16293 | 2198 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 7PLU | 13502 | 2024-04-11 | 2021-09-01 | 3.2 | 3.11 | 3.17 | 3.0 | 0.005 | 0.85 | 4.0 | 0.05 | 14.78 | 0.01 | 1.314 | 5.25 | 0.04 | 0.1 | 99.9 | 0.0 | -1.57 | 0.89 | 0.82 | 3.39 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23288 | 2906 | 13 | 0 | 9 | 0 | 0 | logfile |
✘ | 8ADW | 15372 | 2024-04-06 | 2022-07-11 | 2.95 | 2.93 | 2.87 | 3.0 | 0.009 | 1.46 | 0.0 | 0.07 | 22.42 | 0.01 | 2.469 | 8.01 | 23.33 | 7.7 | 92.3 | 0.0 | -4.02 | 0.51 | 0.80 | 4.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6920 | 990 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 6XKY | 22229 | 2024-04-16 | 2020-06-27 | 3.2 | 3.13 | 3.17 | 3.2 | 0.006 | 0.55 | 0.0 | 0.03 | 10.04 | 0.00 | 1.588 | 4.66 | 0.48 | 1.5 | 98.5 | 0.0 | 2.67 | 0.52 | 0.87 | 2.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38760 | 5420 | 20 | 0 | 0 | 0 | 0 | logfile |
✘ | 8TZR | 41767 | 2024-04-06 | 2023-08-27 | 3.5 | 4.05 | 3.67 | 4.0 | 0.006 | 0.84 | 0.0 | 0.05 | 16.98 | 0.01 | 2.229 | 6.61 | 0.53 | 4.5 | 95.5 | 0.0 | -0.18 | 0.55 | 0.74 | 1.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8821 | 1079 | 6 | 0 | 9 | 0 | 0 | logfile |
✘ | 8FRZ | 29411 | 2024-04-09 | 2023-01-09 | 2.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16480 | 1955 | 10 | 0 | 20 | 0 | 0 | logfile |