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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6PLV | 20377 | 2024-04-08 | 2019-07-01 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14655 | 1725 | 15 | 0 | 75 | 0 | 0 | logfile |
✘ | 7PW4 | 13674 | 2024-04-10 | 2021-10-06 | 3.27 | 3.69 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.15 | 14.41 | 0.00 | 2.030 | 4.58 | 0.00 | 2.8 | 97.2 | 0.0 | 1.69 | 0.79 | 0.82 | 2.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18965 | 2435 | 5 | 0 | 199 | 0 | 0 | logfile |
✔ | 7Z12 | 14438 | 2024-04-10 | 2022-02-24 | 3.0 | 3.83 | — | 3.4 | 0.007 | 1.03 | 1.0 | 0.06 | 15.28 | 0.01 | 0.865 | 31.24 | 1.37 | 15.0 | 83.9 | 1.1 | -3.04 | 0.84 | 0.81 | 1.95 | 3.4 | 0.005 | 0.82 | 0.0 | 0.05 | 16.53 | 0.00 | 2.102 | 21.88 | 1.52 | 12.7 | 87.1 | 0.2 | -1.76 | 0.57 | 0.82 | 0.80 | 1.56 | 18352 | 2286 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K5C | 22680 | 2024-04-17 | 2020-09-16 | 2.7 | 2.91 | — | 2.9 | 0.004 | 0.53 | 0.0 | 0.04 | 14.17 | 0.00 | 2.201 | 4.85 | 0.00 | 3.2 | 96.8 | 0.0 | 1.14 | 0.71 | 0.85 | 3.23 | 2.9 | 0.002 | 0.48 | 0.0 | 0.04 | 17.15 | 0.00 | 2.119 | 4.76 | 1.40 | 2.9 | 97.1 | 0.0 | 2.58 | 0.41 | 0.70 | 0.86 | 2.69 | 41547 | 5268 | 24 | 0 | 0 | 219 | 0 | logfile |
✔ | 7SL1 | 25188 | 2024-04-12 | 2021-10-22 | 3.4 | 3.69 | — | 3.6 | 0.002 | 0.60 | 0.0 | 0.04 | 13.62 | 0.00 | 2.186 | 10.54 | 0.00 | 7.8 | 92.0 | 0.2 | -1.04 | 0.80 | 0.79 | 3.27 | 3.5 | 0.004 | 0.62 | 0.0 | 0.04 | 15.43 | 0.00 | 2.102 | 11.94 | 1.29 | 8.6 | 91.4 | 0.0 | -1.00 | 0.41 | 0.82 | 0.85 | 2.90 | 13830 | 1714 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RTU | 24689 | 2024-04-05 | 2021-08-15 | 3.89 | 4.06 | — | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 20.84 | 0.00 | 2.175 | 7.11 | 0.16 | 3.1 | 96.9 | 0.0 | 4.32 | 0.55 | 0.69 | 0.15 | 4.1 | 0.004 | 0.61 | 0.0 | 0.04 | 16.11 | 0.00 | 2.177 | 6.86 | 2.83 | 2.8 | 97.2 | 0.0 | 4.01 | 0.32 | 0.62 | 0.73 | 0.38 | 5962 | 754 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7WVo | 32855 | 2024-04-11 | 2022-02-10 | 3.41 | 2.96 | — | 3.5 | 0.006 | 0.83 | 0.0 | 0.05 | 8.31 | 0.01 | 2.354 | 2.02 | 0.08 | 3.7 | 96.2 | 0.1 | -3.17 | 0.72 | 0.68 | 0.86 | 3.5 | 0.004 | 0.73 | 0.0 | 0.04 | 14.44 | 0.00 | 2.112 | 11.28 | 2.93 | 3.2 | 96.8 | 0.0 | -0.35 | 1.65 | 0.80 | 0.79 | 1.73 | 23188 | 2961 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6oQU | 20170 | 2024-04-16 | 2019-04-29 | 3.2 | 3.50 | — | 3.3 | 0.009 | 0.93 | 2.0 | 0.05 | 15.07 | 0.00 | 1.718 | 4.70 | 2.92 | 3.5 | 96.5 | 0.0 | -2.70 | 0.75 | 0.86 | 3.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36971 | 4851 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 6HA1 | 0176 | 2024-04-14 | 2018-08-07 | 3.1 | 3.55 | — | 3.3 | 0.007 | 1.09 | 0.0 | 0.07 | 24.29 | 0.01 | 1.892 | 7.10 | 0.90 | 8.8 | 90.7 | 0.6 | -3.85 | 0.78 | 0.79 | 2.71 | 3.3 | 0.006 | 0.72 | 0.0 | 0.04 | 24.17 | 0.01 | 2.029 | 16.96 | 5.02 | 9.5 | 90.2 | 0.2 | -1.41 | 0.62 | 0.83 | 0.87 | 1.93 | 140824 | 5299 | 52 | 4622 | 1 | 0 | 0 | logfile |
✔ | 7VY3 | 32193 | 2024-04-10 | 2021-11-13 | 2.63 | 2.38 | — | 2.5 | 0.019 | 1.84 | 0.0 | 0.05 | 23.06 | 0.02 | 2.032 | 10.93 | 2.30 | 2.0 | 98.0 | 0.0 | 1.10 | 0.70 | 0.85 | 4.77 | 2.5 | 0.003 | 0.64 | 0.0 | 0.04 | 17.22 | 0.00 | 2.049 | 10.02 | 1.84 | 2.1 | 97.9 | 0.0 | 2.56 | 1.26 | 0.70 | 0.88 | 4.37 | 18831 | 1846 | 49 | 0 | 85 | 0 | 0 | logfile |
✔ | 6UCB | 20727 | 2024-04-15 | 2019-09-15 | 3.28 | 3.46 | — | 3.5 | 0.009 | 0.76 | 0.0 | 0.05 | 14.69 | 0.01 | 2.152 | 5.74 | 0.00 | 5.1 | 94.9 | 0.0 | -3.14 | 0.64 | 0.76 | 2.69 | 3.4 | 0.003 | 0.49 | 0.0 | 0.04 | 14.52 | 0.00 | 2.132 | 9.69 | 1.39 | 4.2 | 95.8 | 0.0 | 0.40 | 0.92 | 0.66 | 0.80 | 2.77 | 32324 | 2044 | 16 | 0 | 30 | 0 | 15694 | logfile |
✔ | 6UD8 | 20734 | 2024-04-14 | 2019-09-18 | 3.2 | 3.59 | — | 3.5 | 0.008 | 0.64 | 0.0 | 0.08 | 14.53 | 0.01 | 2.169 | 6.06 | 0.00 | 5.6 | 94.4 | 0.0 | -3.31 | 0.66 | 0.77 | 2.09 | 3.5 | 0.003 | 0.53 | 0.0 | 0.06 | 14.07 | 0.00 | 2.066 | 9.01 | 1.78 | 5.9 | 94.1 | 0.0 | 0.19 | 1.75 | 0.67 | 0.79 | 2.14 | 31662 | 2044 | 16 | 0 | 12 | 0 | 15482 | logfile |
✔ | 7WTJ | 32788 | 2024-04-05 | 2022-02-04 | 4.2 | 4.07 | — | 4.1 | 0.006 | 0.85 | 3.0 | 0.05 | 13.86 | 0.01 | 2.242 | 10.88 | 0.58 | 8.9 | 91.1 | 0.0 | -2.21 | 0.55 | 0.79 | — | 4.1 | 0.004 | 0.72 | 0.0 | 0.05 | 13.76 | 0.00 | 2.221 | 10.25 | 0.00 | 12.2 | 87.8 | 0.0 | -1.92 | 0.40 | 0.55 | 0.80 | — | 3261 | 424 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VXK | 21442 | 2024-04-09 | 2020-02-22 | 3.1 | 3.57 | — | 3.2 | 0.011 | 0.84 | 0.0 | 0.05 | 14.81 | 0.00 | 2.122 | 15.37 | 8.05 | 10.5 | 89.5 | 0.0 | -3.69 | 0.86 | 0.88 | 3.00 | 3.2 | 0.003 | 0.60 | 0.0 | 0.05 | 14.55 | 0.00 | 2.193 | 9.45 | 3.83 | 6.6 | 93.4 | 0.0 | -1.57 | 0.93 | 0.86 | 0.88 | 2.52 | 17418 | 2254 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 7K36 | 22650 | 2024-04-09 | 2020-09-10 | 3.3 | 3.90 | — | 3.5 | 0.007 | 0.74 | 0.0 | 0.18 | 16.34 | 0.00 | 1.054 | 15.42 | 7.26 | 6.0 | 94.0 | 0.0 | -2.36 | 0.84 | 0.85 | 2.39 | 3.5 | 0.002 | 0.62 | 0.0 | 0.04 | 16.60 | 0.00 | 2.078 | 10.95 | 3.44 | 2.9 | 97.1 | 0.0 | 1.58 | 0.55 | 0.84 | 0.86 | 1.91 | 16613 | 2183 | 12 | 0 | 5 | 0 | 0 | logfile |
✘ | 6YXR | 10995 | 2024-04-06 | 2020-05-03 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31910 | 2783 | 20 | 0 | 194 | 0 | 0 | logfile |
✔ | 6WMR | 21851 | 2024-04-14 | 2020-04-21 | 3.46 | 3.73 | — | 3.7 | 0.008 | 0.79 | 0.0 | 0.05 | 18.64 | 0.00 | 2.040 | 17.04 | 9.74 | 14.7 | 85.2 | 0.1 | -4.89 | 0.60 | 0.80 | 1.78 | 3.7 | 0.005 | 0.73 | 0.0 | 0.04 | 18.93 | 0.00 | 2.082 | 12.71 | 5.82 | 10.5 | 89.5 | 0.0 | -1.90 | 0.52 | 0.62 | 0.82 | 1.50 | 30440 | 3743 | 13 | 81 | 3 | 0 | 0 | logfile |
✔ | 7WK9 | 32563 | 2024-04-13 | 2022-01-08 | 3.48 | 3.16 | — | 3.7 | 0.005 | 0.79 | 0.0 | 0.05 | 8.28 | 0.01 | 2.342 | 3.09 | 0.36 | 3.9 | 95.9 | 0.2 | -2.70 | 0.70 | 0.65 | 0.52 | 3.7 | 0.004 | 0.76 | 0.0 | 0.05 | 14.16 | 0.00 | 2.034 | 13.92 | 2.23 | 3.1 | 96.8 | 0.0 | -0.86 | 1.19 | 0.78 | 0.77 | 1.07 | 29745 | 3805 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WEE | 32448 | 2024-04-05 | 2021-12-23 | 4.0 | 4.09 | — | 4.1 | 0.005 | 0.72 | 0.0 | 0.04 | 12.68 | 0.01 | 2.116 | 8.35 | 0.00 | 4.5 | 95.5 | 0.0 | -1.60 | 0.48 | 0.80 | — | 4.0 | 0.004 | 0.71 | 0.0 | 0.05 | 15.53 | 0.00 | 2.073 | 11.84 | 3.77 | 7.6 | 92.4 | 0.0 | -1.48 | 0.45 | 0.48 | 0.82 | — | 3350 | 429 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RHS | 24468 | 2024-04-08 | 2021-07-18 | 2.93 | 3.46 | — | 3.4 | 0.006 | 0.96 | 0.0 | 0.06 | 13.64 | 0.01 | 2.318 | 3.50 | 0.06 | 2.8 | 97.2 | 0.0 | -3.90 | 0.62 | 0.85 | 2.52 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 15.34 | 0.00 | 2.228 | 7.17 | 1.67 | 2.7 | 97.3 | 0.0 | 1.93 | 0.95 | 0.65 | 0.87 | 2.53 | 14767 | 1804 | 8 | 0 | 4 | 0 | 0 | logfile |