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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6VW0 | 21409 | 2023-04-29 | 2020-02-18 | 3.59 | 4.20 | — | 3.9 | 0.010 | 0.95 | 0.0 | 0.06 | 20.29 | 0.01 | 2.126 | 8.10 | 6.78 | 7.9 | 92.0 | 0.1 | -3.75 | 0.88 | 0.86 | 1.62 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 19.93 | 0.00 | 2.049 | 12.65 | 0.21 | 5.9 | 94.0 | 0.0 | -0.09 | 0.61 | 0.87 | 0.84 | 1.22 | 29944 | 3516 | 11 | 130 | 3 | 0 | 0 | logfile |
✔ | 7KiP | 22889 | 2023-04-29 | 2020-10-24 | 3.39 | 4.00 | 3.47 | 3.9 | 0.010 | 1.07 | 0.0 | 0.07 | 8.78 | 0.01 | 2.290 | 1.86 | 0.00 | 7.9 | 92.1 | 0.1 | -4.05 | 0.83 | 0.84 | 3.42 | 3.9 | 0.005 | 0.68 | 0.0 | 0.05 | 11.69 | 0.00 | 2.174 | 4.41 | 0.16 | 8.9 | 91.1 | 0.0 | -1.59 | 0.57 | 0.84 | 0.87 | 2.64 | 30612 | 3576 | 69 | 0 | 222 | 0 | 0 | logfile |
✔ | 6oMF | 20090 | 2023-04-29 | 2019-04-18 | 3.26 | 3.79 | — | 3.7 | 0.012 | 1.03 | 1.0 | 0.06 | 19.51 | 0.01 | 1.800 | 9.63 | 12.34 | 7.2 | 92.6 | 0.2 | -4.28 | 0.70 | 0.72 | 1.43 | 3.7 | 0.006 | 0.73 | 0.0 | 0.05 | 19.09 | 0.00 | 2.022 | 13.15 | 0.39 | 7.2 | 92.8 | 0.0 | -1.39 | 0.61 | 0.72 | 0.75 | 1.11 | 30251 | 3616 | 10 | 92 | 3 | 0 | 0 | logfile |
✔ | 7MKi | 23895 | 2023-04-29 | 2021-04-23 | 3.5 | 3.43 | 3.54 | 3.5 | 0.008 | 0.76 | 0.0 | 0.05 | 16.91 | 0.00 | 2.170 | 6.42 | 5.35 | 7.1 | 92.8 | 0.0 | -1.84 | 0.68 | 0.80 | 2.21 | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 17.58 | 0.00 | 2.155 | 7.02 | 0.19 | 5.1 | 94.9 | 0.0 | -0.22 | 0.35 | 0.71 | 0.80 | 1.59 | 30919 | 3676 | 10 | 96 | 6 | 0 | 0 | logfile |
✔ | 7T2R | 25633 | 2023-04-29 | 2021-12-06 | 3.2 | 2.31 | — | 2.1 | 0.010 | 1.52 | 6.0 | 0.12 | 15.94 | 0.01 | 1.915 | 10.04 | 5.23 | 10.3 | 89.7 | 0.0 | -4.57 | 0.76 | 0.76 | 2.17 | 2.1 | 0.004 | 0.82 | 0.0 | 0.05 | 17.23 | 0.01 | 2.062 | 18.35 | 1.05 | 9.8 | 90.2 | 0.0 | -2.07 | 0.55 | 0.77 | 0.79 | 1.81 | 29216 | 3736 | 20 | 0 | 22 | 0 | 0 | logfile |
✘ | 7MKE | 23893 | 2023-04-29 | 2021-04-23 | 3.7 | 4.27 | 3.78 | 4.0 | 0.009 | 0.86 | 0.0 | 0.05 | 17.32 | 0.01 | 2.077 | 8.96 | 7.42 | 8.8 | 91.1 | 0.1 | -2.11 | 0.88 | 0.86 | 1.39 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30641 | 3675 | 11 | 81 | 7 | 0 | 0 | logfile |
✔ | 7WRF | 32725 | 2023-04-29 | 2022-01-26 | 3.04 | 3.32 | — | 3.3 | 0.008 | 0.99 | 0.0 | 0.06 | 10.46 | 0.01 | 2.294 | 4.47 | 0.12 | 6.2 | 93.8 | 0.0 | -3.74 | 0.71 | 0.81 | 3.17 | 3.3 | 0.005 | 0.69 | 0.0 | 0.04 | 15.25 | 0.00 | 2.101 | 10.67 | 0.42 | 5.7 | 94.3 | 0.0 | 0.46 | 0.83 | 0.72 | 0.84 | 2.51 | 30469 | 3720 | 8 | 0 | 9 | 0 | 0 | logfile |
✔ | 6VE2 | 21152 | 2023-04-29 | 2019-12-28 | 4.3 | 4.80 | 4.34 | 4.2 | 0.006 | 1.23 | 0.0 | 0.07 | 5.37 | 0.01 | 2.173 | 16.97 | 0.00 | 4.7 | 94.9 | 0.5 | -0.93 | 0.83 | 0.70 | — | 4.2 | 0.004 | 0.94 | 0.0 | 0.05 | 7.57 | 0.00 | 2.114 | 14.88 | 0.00 | 13.8 | 86.1 | 0.1 | -3.72 | 1.19 | 0.82 | 0.75 | — | 30198 | 6153 | 21 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VVZ | 21408 | 2023-04-29 | 2020-02-18 | 3.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29860 | 3508 | 12 | 127 | 4 | 0 | 0 | logfile |
✔ | 6EEC | 9041 | 2023-04-29 | 2018-08-13 | 3.55 | 3.91 | — | 3.8 | 0.011 | 1.02 | 2.0 | 0.05 | 15.64 | 0.01 | 1.828 | 36.23 | 0.55 | 11.6 | 88.1 | 0.3 | -3.74 | 0.81 | 0.85 | 2.78 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 17.82 | 0.00 | 2.015 | 12.12 | 0.21 | 5.6 | 94.4 | 0.0 | -0.49 | 0.69 | 0.81 | 0.85 | 1.99 | 29896 | 3508 | 12 | 128 | 4 | 0 | 0 | logfile |
✔ | 7WRA | 32720 | 2023-04-29 | 2022-01-26 | 2.98 | 3.19 | — | 3.3 | 0.006 | 0.99 | 0.0 | 0.05 | 10.56 | 0.01 | 2.231 | 6.76 | 0.60 | 6.0 | 94.0 | 0.0 | -3.96 | 0.69 | 0.78 | 2.10 | 3.1 | 0.005 | 0.75 | 0.0 | 0.04 | 15.65 | 0.01 | 2.135 | 14.42 | 2.10 | 6.5 | 93.5 | 0.0 | -0.55 | 0.87 | 0.70 | 0.81 | 1.63 | 30373 | 3720 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WRC | 32722 | 2023-04-29 | 2022-01-26 | 3.21 | 3.55 | — | 3.4 | 0.010 | 1.07 | 0.0 | 0.06 | 10.59 | 0.01 | 2.235 | 5.92 | 0.12 | 7.0 | 93.0 | 0.0 | -3.90 | 0.71 | 0.77 | 2.04 | 3.4 | 0.005 | 0.70 | 0.0 | 0.04 | 14.64 | 0.00 | 2.159 | 12.36 | 0.45 | 5.4 | 94.6 | 0.0 | 0.46 | 1.73 | 0.74 | 0.83 | 1.86 | 30468 | 3720 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7WRE | 32724 | 2023-04-29 | 2022-01-26 | 2.52 | 3.32 | — | 3.1 | 0.013 | 1.18 | 0.0 | 0.07 | 10.86 | 0.01 | 2.212 | 6.94 | 0.24 | 6.2 | 93.5 | 0.3 | -3.69 | 0.75 | 0.82 | 2.89 | 3.1 | 0.008 | 0.82 | 0.0 | 0.05 | 15.33 | 0.01 | 2.117 | 12.69 | 3.00 | 6.8 | 93.2 | 0.0 | 0.29 | 0.86 | 0.73 | 0.84 | 2.13 | 30468 | 3720 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7MDi | 23773 | 2023-04-29 | 2021-04-05 | 4.3 | 4.42 | — | 4.3 | 0.006 | 0.75 | 0.0 | 0.04 | 13.13 | 0.00 | 2.089 | 11.76 | 0.17 | 10.8 | 89.2 | 0.1 | -4.24 | 0.78 | 0.81 | — | 4.3 | 0.002 | 0.59 | 0.0 | 0.04 | 13.04 | 0.00 | 1.965 | 8.19 | 0.00 | 9.3 | 90.7 | 0.0 | -1.47 | 0.46 | 0.78 | 0.81 | — | 30608 | 4348 | 20 | 0 | 24 | 24 | 0 | logfile |
✔ | 7X0Y | 32929 | 2023-04-29 | 2022-02-22 | 3.89 | 4.40 | 3.97 | 4.2 | 0.006 | 0.75 | 0.0 | 0.05 | 14.08 | 0.00 | 2.049 | 29.33 | 0.06 | 10.2 | 89.8 | 0.0 | -4.73 | 0.80 | 0.81 | 1.29 | 4.2 | 0.006 | 0.76 | 0.0 | 0.05 | 15.58 | 0.00 | 2.091 | 14.73 | 0.31 | 9.5 | 90.5 | 0.0 | -1.47 | 0.61 | 0.79 | 0.82 | 1.17 | 15242 | 1838 | 10 | 0 | 20 | 0 | 0 | logfile |
✔ | 7WRB | 32721 | 2023-04-29 | 2022-01-26 | 2.88 | 3.16 | — | 3.3 | 0.006 | 1.01 | 0.0 | 0.05 | 10.44 | 0.01 | 2.276 | 6.29 | 0.12 | 6.0 | 93.9 | 0.1 | -3.78 | 0.70 | 0.79 | 2.33 | 3.3 | 0.005 | 0.82 | 0.0 | 0.05 | 16.25 | 0.00 | 2.208 | 14.34 | 3.22 | 4.6 | 95.4 | 0.0 | 0.26 | 0.92 | 0.70 | 0.83 | 1.96 | 30376 | 3720 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7WRD | 32723 | 2023-04-29 | 2022-01-26 | 2.98 | 3.14 | — | 3.3 | 0.009 | 1.08 | 0.0 | 0.06 | 10.61 | 0.01 | 2.242 | 5.21 | 0.12 | 5.8 | 94.0 | 0.2 | -3.61 | 0.68 | 0.80 | 2.80 | 3.1 | 0.005 | 0.73 | 0.0 | 0.04 | 15.76 | 0.00 | 2.154 | 12.43 | 2.64 | 6.1 | 93.9 | 0.0 | 0.33 | 1.36 | 0.68 | 0.82 | 2.40 | 30468 | 3720 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8HW1 | 35080 | 2023-04-29 | 2022-12-28 | 3.13 | 3.07 | 2.93 | 3.2 | 0.028 | 2.49 | 0.0 | 0.29 | 22.01 | 0.03 | 2.137 | 14.51 | 6.74 | 11.3 | 88.7 | 0.0 | -2.57 | 0.68 | 0.85 | 3.07 | 3.2 | 0.003 | 0.90 | 0.0 | 0.05 | 19.99 | 0.00 | 2.173 | 7.18 | 0.05 | 9.4 | 90.6 | 0.0 | -0.34 | 0.45 | 0.66 | 0.86 | 3.07 | 29271 | 2651 | 22 | 0 | 143 | 0 | 0 | logfile |
✔ | 6N58 | 0349 | 2023-04-29 | 2018-11-21 | 3.78 | 3.90 | — | 3.9 | 0.013 | 1.21 | 0.0 | 0.06 | 10.64 | 0.01 | 1.892 | 38.60 | 0.37 | 14.7 | 84.9 | 0.4 | -4.74 | 0.73 | 0.82 | 2.09 | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 15.58 | 0.00 | 2.054 | 12.24 | 0.46 | 7.3 | 92.6 | 0.1 | -1.38 | 3.03 | 0.73 | 0.81 | 1.26 | 30189 | 3833 | 11 | 0 | 8 | 0 | 0 | logfile |
✔ | 6SoF | 10273 | 2023-04-29 | 2019-08-29 | 4.3 | 4.23 | 4.20 | 4.1 | 0.006 | 0.93 | 0.0 | 0.05 | 14.59 | 0.01 | 2.017 | 10.51 | 0.62 | 17.7 | 82.3 | 0.0 | -5.47 | 0.82 | 0.72 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.36 | 0.00 | 1.934 | 15.84 | 0.00 | 15.3 | 84.7 | 0.0 | -3.90 | 1.45 | 0.82 | 0.72 | — | 30333 | 1966 | 12 | 0 | 0 | 0 | 14564 | logfile |