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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MoA | 23922 | 2022-12-12 | 2021-05-01 | 4.9 | 4.75 | — | 4.0 | 0.011 | 1.36 | 0.0 | 0.08 | 18.24 | 0.01 | 1.983 | 27.95 | 10.24 | 8.6 | 91.0 | 0.5 | -1.69 | 0.83 | 0.76 | — | 3.9 | 0.003 | 0.74 | 0.0 | 0.05 | 13.32 | 0.00 | 2.117 | 22.38 | 0.07 | 6.9 | 93.0 | 0.1 | -1.35 | 1.47 | 0.84 | 0.79 | — | 12511 | 1580 | 5 | 0 | 12 | 0 | 0 | logfile |
✔ | 7A1D | 11606 | 2022-12-18 | 2020-08-12 | 4.19 | 4.02 | 4.19 | 4.1 | 0.006 | 1.04 | 0.0 | 0.06 | 10.62 | 0.01 | 2.253 | 7.83 | 0.35 | 8.4 | 91.6 | 0.0 | -4.40 | 0.83 | 0.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33032 | 4252 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AKD | 11812 | 2022-12-15 | 2020-09-30 | 4.0 | 3.98 | — | 4.0 | 0.003 | 0.64 | 0.0 | 0.05 | 13.02 | 0.00 | 2.126 | 2.92 | 0.21 | 2.7 | 97.3 | 0.0 | -1.66 | 0.74 | 0.77 | — | 4.0 | 0.004 | 0.66 | 0.0 | 0.05 | 14.69 | 0.00 | 2.122 | 5.85 | 0.31 | 4.3 | 95.7 | 0.0 | -0.37 | 1.24 | 0.75 | 0.79 | — | 27358 | 3404 | 29 | 0 | 79 | 0 | 0 | logfile |
✔ | 7B6E | 12053 | 2022-12-11 | 2020-12-07 | 4.5 | 2.79 | — | 5.1 | 0.005 | 1.03 | 0.0 | 0.05 | 15.04 | 0.01 | 2.129 | 36.28 | 0.00 | 10.9 | 89.1 | 0.0 | -3.88 | 0.62 | 0.66 | — | 4.9 | 0.003 | 0.98 | 0.0 | 0.05 | 14.71 | 0.00 | 2.119 | 24.18 | 0.00 | 10.9 | 89.1 | 0.0 | -1.33 | 0.86 | 0.61 | 0.66 | — | 2205 | 269 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M2Y | 23637 | 2022-12-14 | 2021-03-17 | 4.03 | 4.58 | 3.93 | 4.4 | 0.022 | 1.80 | 0.0 | 0.11 | 10.99 | 0.01 | 1.961 | 4.31 | 0.05 | 2.2 | 97.6 | 0.3 | 0.03 | 0.52 | 0.71 | — | 4.4 | 0.004 | 0.76 | 0.0 | 0.04 | 13.21 | 0.00 | 2.167 | 20.49 | 0.10 | 5.6 | 94.2 | 0.2 | -0.32 | 1.80 | 0.52 | 0.76 | — | 18560 | 2278 | 7 | 2 | 0 | 0 | 0 | logfile |
✔ | 7LLK | 23424 | 2022-12-20 | 2021-02-04 | 4.8 | 7.00 | 4.88 | 4.8 | 0.014 | 2.12 | 14.0 | 0.12 | 15.77 | 0.02 | 2.051 | 2.46 | 4.52 | 12.6 | 84.8 | 2.6 | -3.42 | 0.81 | 0.73 | — | 4.8 | 0.006 | 0.85 | 0.0 | 0.05 | 13.38 | 0.01 | 1.739 | 35.22 | 0.19 | 16.8 | 82.8 | 0.5 | -3.78 | 0.89 | 0.84 | 0.79 | — | 38982 | 2397 | 47 | 0 | 108 | 0 | 18627 | logfile |
✔ | 7NBX | 12262 | 2022-12-14 | 2021-01-28 | 4.8 | 5.30 | 4.72 | 4.9 | 0.008 | 1.04 | 0.0 | 0.05 | 15.90 | 0.01 | 1.950 | 12.59 | 0.00 | 12.3 | 87.6 | 0.1 | -4.49 | 0.76 | 0.82 | — | 4.9 | 0.005 | 0.69 | 0.0 | 0.04 | 14.27 | 0.00 | 1.835 | 16.83 | 0.00 | 12.7 | 87.3 | 0.0 | -2.53 | 0.70 | 0.76 | 0.81 | — | 22637 | 1475 | 5 | 0 | 0 | 0 | 11129 | logfile |
✔ | 7ENJ | 31211 | 2022-12-12 | 2021-04-17 | 4.4 | 4.62 | — | 4.0 | 0.011 | 1.18 | 16.0 | 0.07 | 15.29 | 0.01 | 2.211 | 7.87 | 1.23 | 5.7 | 93.7 | 0.6 | -2.67 | 0.75 | 0.49 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 14.09 | 0.00 | 2.106 | 12.63 | 0.02 | 5.0 | 94.9 | 0.1 | 1.41 | 0.72 | 0.81 | 0.66 | — | 57971 | 7340 | 27 | 0 | 21 | 0 | 0 | logfile |
✔ | 7LJF | 23392 | 2022-12-13 | 2021-01-29 | 4.0 | 4.34 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 13.74 | 0.00 | 1.987 | 14.43 | 0.41 | 3.4 | 96.6 | 0.0 | 0.00 | 0.83 | 0.80 | — | 4.2 | 0.006 | 0.77 | 0.0 | 0.05 | 15.72 | 0.00 | 1.752 | 24.09 | 0.41 | 6.1 | 93.9 | 0.0 | -0.76 | 0.36 | 0.83 | 0.82 | — | 15742 | 2007 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 7EWQ | 31361 | 2022-12-21 | 2021-05-25 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43232 | 5236 | 28 | 84 | 0 | 0 | 0 | logfile |
✔ | 7NNH | 12477 | 2022-12-11 | 2021-02-24 | 4.0 | 5.15 | — | 4.2 | 0.004 | 1.27 | 0.0 | 0.05 | 15.82 | 0.01 | 2.066 | 35.16 | 0.34 | 23.0 | 76.5 | 0.5 | -3.61 | 0.74 | 0.80 | — | 4.2 | 0.003 | 1.12 | 0.0 | 0.05 | 16.96 | 0.01 | 2.112 | 27.04 | 0.17 | 20.2 | 79.5 | 0.3 | -2.67 | 1.12 | 0.74 | 0.79 | — | 5299 | 637 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZGD | 11202 | 2022-12-12 | 2020-06-18 | 4.1 | 4.30 | 3.99 | 4.2 | 0.006 | 0.62 | 0.0 | 0.05 | 10.93 | 0.01 | 2.137 | 10.94 | 0.61 | 4.6 | 95.4 | 0.0 | -1.11 | 0.74 | 0.82 | — | 4.2 | 0.003 | 0.61 | 0.0 | 0.05 | 11.97 | 0.00 | 2.182 | 9.05 | 0.12 | 2.4 | 97.6 | 0.0 | -0.46 | 1.00 | 0.71 | 0.81 | — | 10175 | 1440 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BNQ | 12232 | 2022-12-12 | 2021-01-22 | 4.1 | 4.35 | 4.09 | 4.2 | 0.005 | 0.80 | 0.0 | 0.05 | 14.89 | 0.01 | 2.293 | 4.99 | 0.32 | 5.4 | 94.6 | 0.0 | -3.83 | 0.78 | 0.86 | — | 4.2 | 0.003 | 0.61 | 0.0 | 0.04 | 14.26 | 0.00 | 2.213 | 9.59 | 0.00 | 5.4 | 94.6 | 0.0 | -1.42 | 1.21 | 0.78 | 0.85 | — | 11617 | 1488 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZY7 | 11553 | 2022-12-14 | 2020-07-30 | 4.64 | 8.26 | 4.84 | 4.6 | 0.009 | 1.01 | 0.0 | 0.08 | 12.28 | 0.01 | 2.218 | 6.62 | 0.00 | 1.7 | 98.3 | 0.0 | -1.71 | 0.93 | 0.83 | — | 4.6 | 0.003 | 0.63 | 0.0 | 0.04 | 13.94 | 0.00 | 2.117 | 20.08 | 0.00 | 3.1 | 96.9 | 0.0 | -0.62 | 2.30 | 0.94 | 0.82 | — | 19979 | 2319 | 10 | 60 | 4 | 0 | 0 | logfile |
✔ | 7NVR | 12610 | 2022-12-17 | 2021-03-15 | 4.5 | 4.38 | 4.40 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 15.01 | 0.00 | 1.807 | 8.82 | 0.01 | 3.9 | 96.0 | 0.0 | 0.72 | 0.75 | 0.57 | — | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 15.27 | 0.00 | 1.962 | 14.53 | 0.01 | 4.2 | 95.8 | 0.0 | 0.44 | 1.67 | 0.73 | 0.54 | — | 96126 | 11548 | 71 | 128 | 157 | 0 | 0 | logfile |
✔ | 7M2W | 23635 | 2022-12-20 | 2021-03-17 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39366 | 4827 | 16 | 0 | 4 | 0 | 0 | logfile |
✔ | 7EGA | 31110 | 2022-12-16 | 2021-03-24 | 4.1 | 4.55 | — | 4.1 | 0.008 | 1.08 | 35.0 | 0.07 | 16.87 | 0.01 | 1.445 | 18.80 | 3.89 | 6.5 | 93.1 | 0.4 | -3.75 | 0.60 | 0.28 | — | 3.9 | 0.004 | 0.71 | 0.0 | 0.04 | 15.57 | 0.00 | 1.930 | 15.63 | 0.00 | 5.4 | 94.5 | 0.1 | -0.50 | 1.39 | 0.75 | 0.55 | — | 85697 | 10273 | 49 | 170 | 11 | 0 | 0 | logfile |
✔ | 7Mo8 | 23920 | 2022-12-12 | 2021-05-01 | 4.5 | 3.94 | — | 3.6 | 0.008 | 1.00 | 0.0 | 0.05 | 16.57 | 0.01 | 2.070 | 31.41 | 0.00 | 9.8 | 90.2 | 0.0 | -1.95 | 0.82 | 0.75 | — | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.30 | 0.00 | 2.157 | 19.88 | 0.00 | 5.9 | 94.1 | 0.0 | -1.49 | 2.28 | 0.83 | 0.75 | — | 9877 | 1250 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 7ET2 | 31296 | 2022-12-20 | 2021-05-12 | 4.2 | 4.39 | — | 4.3 | 0.006 | 1.04 | 0.0 | 0.06 | 16.25 | 0.01 | 2.282 | 6.63 | 0.41 | 4.5 | 95.5 | 0.0 | -4.80 | 0.52 | 0.78 | — | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 15.04 | 0.01 | 2.032 | 17.03 | 0.22 | 3.9 | 96.1 | 0.0 | -1.71 | 0.72 | 0.46 | 0.79 | — | 38880 | 4812 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N1Y | 24127 | 2022-12-15 | 2021-05-28 | 4.3 | 2.48 | — | 2.0 | 0.015 | 2.09 | 23.0 | 0.15 | 15.16 | 0.01 | 1.099 | 10.91 | 1.91 | 8.5 | 90.8 | 0.6 | -2.82 | 0.78 | 0.64 | — | 1.8 | 0.007 | 0.98 | 0.0 | 0.06 | 14.76 | 0.01 | 1.905 | 23.67 | 0.04 | 9.7 | 90.3 | 0.0 | -2.27 | 0.72 | 0.79 | 0.65 | — | 26636 | 3242 | 31 | 0 | 91 | 0 | 0 | logfile |