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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7BZW | 30261 | 2023-04-21 | 2020-04-28 | 4.6 | 7.66 | 4.73 | 6.0 | 0.003 | 0.82 | 0.0 | 0.05 | 15.82 | 0.01 | 2.176 | 28.88 | 0.00 | 19.4 | 80.6 | 0.0 | -5.59 | 0.85 | 0.67 | — | 6.5 | 0.003 | 0.82 | 0.0 | 0.05 | 14.68 | 0.01 | 1.922 | 20.13 | 0.00 | 19.3 | 80.7 | 0.0 | -2.79 | 1.80 | 0.93 | 0.86 | — | 9756 | 1212 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W5V | 21549 | 2023-04-24 | 2020-03-13 | 4.0 | 4.11 | — | 4.0 | 0.008 | 1.37 | 4.0 | 0.18 | 16.89 | 0.01 | 1.979 | 62.54 | 9.99 | 7.0 | 92.3 | 0.7 | -2.21 | 0.63 | 0.75 | — | 4.0 | 0.003 | 0.88 | 0.0 | 0.05 | 16.72 | 0.01 | 2.047 | 14.88 | 0.35 | 5.8 | 94.2 | 0.0 | -0.38 | 0.86 | 0.63 | 0.77 | — | 10586 | 1307 | 9 | 0 | 24 | 0 | 0 | logfile |
✔ | 7WZR | 32912 | 2023-04-28 | 2022-02-19 | 4.7 | 4.70 | — | 4.4 | 0.008 | 1.21 | 3.0 | 0.06 | 7.95 | 0.01 | 2.197 | 7.80 | 0.00 | 21.6 | 77.2 | 1.2 | -4.58 | 0.76 | 0.65 | — | 4.4 | 0.002 | 0.67 | 0.0 | 0.04 | 4.72 | 0.00 | 2.151 | 1.89 | 0.00 | 11.3 | 88.4 | 0.3 | -0.14 | 1.59 | 0.76 | 0.69 | — | 27037 | 5440 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MSH | 3565 | 2023-04-20 | 2017-01-04 | 4.25 | 3.96 | — | 20.0 | 0.014 | 1.56 | 0.0 | 0.07 | 9.56 | 0.01 | 2.323 | 3.07 | 0.00 | 6.1 | 92.5 | 1.5 | -0.93 | 0.01 | 0.02 | — | 3.7 | 0.003 | 0.76 | 0.0 | 0.05 | 12.62 | 0.01 | 2.155 | 14.78 | 0.00 | 6.1 | 93.8 | 0.2 | -0.92 | 2.67 | 0.04 | 0.14 | — | 4287 | 551 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZQA | 11357 | 2023-04-26 | 2020-07-09 | 4.4 | 4.48 | — | 4.4 | 0.006 | 1.11 | 1.0 | 0.06 | 14.62 | 0.01 | 1.928 | 5.28 | 0.00 | 9.3 | 90.4 | 0.3 | -3.27 | 0.77 | 0.74 | — | 4.4 | 0.011 | 1.41 | 0.0 | 0.06 | 16.91 | 0.01 | 1.638 | 24.83 | 0.00 | 20.3 | 79.5 | 0.2 | -3.96 | 1.34 | 0.76 | 0.75 | — | 125991 | 19047 | 63 | 1485 | 5 | 0 | 0 | logfile |
✔ | 6UVS | 20915 | 2023-04-24 | 2019-11-04 | 4.2 | 4.33 | — | 4.2 | 0.010 | 1.17 | 0.0 | 0.06 | 9.04 | 0.01 | 2.148 | 2.19 | 0.00 | 16.0 | 84.0 | 0.0 | -4.91 | 0.68 | 0.79 | — | 4.2 | 0.002 | 0.62 | 0.0 | 0.04 | 9.23 | 0.01 | 1.899 | 1.10 | 0.00 | 7.2 | 92.8 | 0.0 | 2.03 | 0.86 | 0.73 | 0.85 | — | 17040 | 1920 | 12 | 0 | 0 | 0 | 5976 | logfile |
✔ | 6GH6 | 0002 | 2023-04-28 | 2018-05-04 | 4.1 | 4.20 | — | 3.9 | 0.004 | 0.91 | 0.0 | 0.05 | 14.40 | 0.00 | 1.934 | 15.53 | 0.38 | 9.7 | 89.3 | 0.9 | -3.61 | 0.85 | 0.74 | — | 3.9 | 0.005 | 0.81 | 0.0 | 0.04 | 15.96 | 0.00 | 1.965 | 12.53 | 0.11 | 9.9 | 89.5 | 0.6 | -1.09 | 1.78 | 0.87 | 0.81 | — | 28051 | 3482 | 8 | 96 | 51 | 0 | 0 | logfile |
✔ | 6UGF | 20763 | 2023-04-23 | 2019-09-26 | 4.2 | 4.51 | — | 4.2 | 0.008 | 1.11 | 0.0 | 0.05 | 13.93 | 0.01 | 2.046 | 4.71 | 0.30 | 6.0 | 93.9 | 0.1 | -4.55 | 0.80 | 0.72 | — | 4.3 | 0.003 | 0.61 | 0.0 | 0.04 | 13.25 | 0.00 | 1.877 | 8.62 | 0.00 | 4.7 | 95.3 | 0.0 | -0.44 | 0.62 | 0.84 | 0.82 | — | 13874 | 1862 | 12 | 0 | 9 | 0 | 0 | logfile |
✔ | 6B19 | 7031 | 2023-04-20 | 2017-09-18 | 4.5 | 4.61 | — | 4.4 | 0.023 | 1.38 | 0.0 | 0.05 | 6.45 | 0.01 | 2.201 | 16.18 | 0.00 | 19.4 | 80.5 | 0.1 | -5.73 | 0.74 | 0.63 | — | 4.4 | 0.003 | 0.84 | 0.0 | 0.04 | 12.73 | 0.00 | 1.937 | 28.68 | 0.00 | 25.4 | 74.6 | 0.0 | -4.85 | 1.32 | 0.78 | 0.68 | — | 5699 | 907 | 4 | 38 | 0 | 0 | 409 | logfile |
✔ | 7KVC | 23046 | 2023-04-26 | 2020-11-27 | 4.7 | 4.90 | — | 4.8 | 0.005 | 0.84 | 0.0 | 0.05 | 13.91 | 0.00 | 2.224 | 33.61 | 0.00 | 10.7 | 89.3 | 0.0 | -2.46 | 0.82 | 0.81 | — | 4.8 | 0.004 | 0.76 | 0.0 | 0.04 | 14.05 | 0.01 | 2.222 | 24.53 | 0.00 | 5.6 | 94.4 | 0.0 | -0.15 | 0.55 | 0.81 | 0.79 | — | 21920 | 2660 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 7VZR | 32229 | 2023-04-25 | 2021-11-16 | 2.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21354 | 2266 | 22 | 0 | 117 | 6 | 0 | logfile |
✔ | 7N64 | 24193 | 2023-04-20 | 2021-06-07 | 4.2 | 3.94 | — | 3.9 | 0.009 | 1.06 | 0.0 | 0.06 | 15.21 | 0.01 | 2.157 | 36.86 | 1.78 | 20.8 | 78.9 | 0.3 | -3.80 | 0.65 | 0.71 | — | 3.9 | 0.005 | 0.83 | 0.0 | 0.05 | 13.92 | 0.01 | 2.089 | 23.18 | 0.13 | 14.5 | 85.5 | 0.0 | -2.77 | 0.52 | 0.64 | 0.69 | — | 7189 | 906 | 7 | 0 | 7 | 0 | 0 | logfile |
✘ | 7VZG | 32228 | 2023-04-26 | 2021-11-16 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22458 | 2402 | 25 | 0 | 119 | 6 | 0 | logfile |
✘ | 7CUM | 30472 | 2023-04-26 | 2020-08-23 | 3.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22214 | 1358 | 4 | 0 | 19 | 0 | 10852 | logfile |
✘ | 7N62 | 24192 | 2023-04-20 | 2021-06-07 | 4.0 | 3.42 | — | 3.9 | 0.006 | 0.82 | 0.0 | 0.05 | 13.98 | 0.01 | 2.203 | 21.20 | 0.00 | 14.9 | 85.1 | 0.0 | -2.74 | 0.73 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5613 | 712 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 6R7Y | 4747 | 2023-04-21 | 2019-03-29 | 4.2 | 4.23 | 4.05 | 4.2 | 0.010 | 1.07 | 0.0 | 0.06 | 13.58 | 0.01 | 2.188 | 3.88 | 1.71 | 2.6 | 97.3 | 0.2 | -3.14 | 0.64 | 0.86 | — | 4.2 | 0.004 | 0.64 | 0.0 | 0.04 | 14.13 | 0.00 | 2.200 | 7.07 | 0.00 | 2.8 | 97.0 | 0.2 | 1.52 | 1.09 | 0.65 | 0.85 | — | 10062 | 1254 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 7L2i | 23129 | 2023-04-24 | 2020-12-17 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17432 | 2124 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 6XZG | 10662 | 2023-04-23 | 2020-02-04 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✔ | 6oCE | 20017 | 2023-04-22 | 2019-03-23 | 4.9 | 4.11 | — | 4.0 | 0.006 | 0.73 | 0.0 | 0.04 | 8.07 | 0.01 | 1.868 | 8.56 | 0.00 | 9.9 | 90.1 | 0.0 | -4.37 | 0.45 | 0.60 | — | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 12.52 | 0.01 | 2.176 | 12.97 | 0.00 | 12.3 | 87.7 | 0.0 | -2.82 | 1.19 | 0.46 | 0.63 | — | 11228 | 1378 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XQJ | 33398 | 2023-04-21 | 2022-05-07 | 4.0 | 4.56 | 3.73 | 4.2 | 0.007 | 0.84 | 0.0 | 0.05 | 15.98 | 0.01 | 2.401 | 6.40 | 6.01 | 6.5 | 93.5 | 0.0 | -2.82 | 0.78 | 0.85 | — | 4.3 | 0.004 | 0.84 | 0.0 | 0.04 | 15.98 | 0.00 | 2.320 | 11.01 | 0.46 | 4.8 | 95.2 | 0.0 | 0.90 | 0.78 | 0.78 | 0.85 | — | 9960 | 1224 | 6 | 0 | 0 | 0 | 0 | logfile |