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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZLU | 11274 | 2024-04-17 | 2020-07-01 | 4.2 | 3.89 | — | 3.8 | 0.008 | 0.99 | 0.0 | 0.06 | 16.84 | 0.01 | 1.417 | 18.36 | 0.09 | 4.6 | 94.9 | 0.4 | -2.05 | 0.64 | 0.48 | — | 3.8 | 0.004 | 0.78 | 1.0 | 0.05 | 13.67 | 0.00 | 2.074 | 14.83 | 0.00 | 4.5 | 95.4 | 0.1 | -0.81 | 2.87 | 0.77 | 0.71 | — | 21700 | 2718 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6C9A | 7435 | 2024-04-08 | 2018-01-25 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12182 | 1446 | 6 | 0 | 8 | 0 | 0 | logfile |
✔ | 7JGE | 22324 | 2024-04-10 | 2020-07-19 | 4.0 | 4.23 | — | 4.2 | 0.002 | 0.44 | 0.0 | 0.05 | 13.35 | 0.00 | 2.115 | 14.01 | 0.00 | 3.7 | 96.3 | 0.0 | 1.11 | 0.54 | 0.54 | — | 4.2 | 0.004 | 0.80 | 0.0 | 0.06 | 15.73 | 0.00 | 1.976 | 19.53 | 1.00 | 6.6 | 93.4 | 0.0 | -0.09 | 0.65 | 0.61 | 0.65 | — | 20315 | 1437 | 1 | 0 | 0 | 0 | 8508 | logfile |
✔ | 6NBi | 0412 | 2024-04-07 | 2018-12-07 | 4.0 | 4.43 | — | 4.3 | 0.005 | 0.88 | 0.0 | 0.05 | 8.93 | 0.00 | 2.337 | 2.35 | 0.31 | 2.8 | 97.2 | 0.0 | -1.70 | 0.62 | 0.74 | — | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 15.62 | 0.00 | 2.141 | 17.60 | 3.29 | 2.2 | 97.8 | 0.0 | 0.36 | 2.52 | 0.64 | 0.78 | — | 9195 | 1141 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 7PTL | 13630 | 2024-04-11 | 2021-09-27 | 4.9 | 10.06 | 4.95 | — | 0.005 | 1.01 | 0.0 | 0.06 | 23.55 | 0.01 | 2.401 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.79 | — | — | 0.007 | 0.87 | 0.0 | 0.04 | 27.76 | 0.01 | 1.723 | 81.11 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.51 | 0.92 | 0.92 | — | 23080 | 0 | 1 | 720 | 0 | 0 | 7743 | logfile |
✘ | 3J5Q | 5776 | 2024-04-10 | 2013-10-28 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18556 | 2448 | 8 | 0 | 44 | 0 | 292 | logfile |
✘ | 6LSS | 0964 | 2024-04-14 | 2020-01-20 | 3.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 140545 | 7369 | 67 | 3750 | 250 | 16 | 0 | logfile |
✔ | 7XQJ | 33398 | 2024-04-07 | 2022-05-07 | 4.0 | 4.56 | 3.73 | 4.2 | 0.007 | 0.84 | 0.0 | 0.05 | 15.98 | 0.01 | 2.401 | 6.40 | 6.01 | 6.5 | 93.5 | 0.0 | -2.82 | 0.78 | 0.85 | — | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 16.51 | 0.00 | 2.256 | 9.82 | 3.10 | 4.1 | 95.9 | 0.0 | 1.25 | 0.72 | 0.78 | 0.85 | — | 9960 | 1224 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7BKD | 12210 | 2024-04-12 | 2021-01-15 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24799 | 3177 | 18 | 0 | 26 | 0 | 0 | logfile |
✔ | 7UY8 | 26867 | 2024-04-07 | 2022-05-06 | 4.5 | 8.56 | 4.38 | 4.2 | 0.003 | 0.63 | 1.0 | 0.05 | 14.55 | 0.00 | 2.207 | 8.69 | 0.00 | 6.1 | 93.9 | 0.0 | -0.66 | 0.79 | 0.60 | — | 4.4 | 0.003 | 0.64 | 0.0 | 0.04 | 14.41 | 0.00 | 2.222 | 15.98 | 0.00 | 4.8 | 95.1 | 0.1 | -0.31 | 1.40 | 0.92 | 0.85 | — | 9552 | 1161 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 8AVC | 15678 | 2024-04-13 | 2022-08-26 | 4.6 | 5.35 | 5.50 | 4.6 | 0.004 | 0.80 | 1.0 | 0.05 | 12.05 | 0.01 | 1.931 | 18.34 | 0.00 | 4.3 | 95.4 | 0.3 | -0.17 | 0.81 | 0.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17505 | 2199 | 9 | 0 | 3 | 0 | 0 | logfile |
✔ | 7WZR | 32912 | 2024-04-12 | 2022-02-19 | 4.7 | 4.70 | — | 4.4 | 0.008 | 1.21 | 3.0 | 0.06 | 7.95 | 0.01 | 2.197 | 7.80 | 0.00 | 21.6 | 77.2 | 1.2 | -4.58 | 0.76 | 0.65 | — | 4.4 | 0.002 | 0.67 | 0.0 | 0.04 | 4.72 | 0.00 | 2.151 | 1.89 | 0.00 | 11.3 | 88.4 | 0.3 | -0.14 | 1.59 | 0.76 | 0.69 | — | 27037 | 5440 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SHS | 25135 | 2024-04-06 | 2021-10-11 | 4.1 | 3.40 | — | 4.3 | 0.003 | 0.74 | 0.0 | 0.04 | 13.65 | 0.01 | 2.349 | 5.95 | 0.00 | 1.8 | 98.2 | 0.0 | 0.74 | 0.60 | 0.71 | — | 4.1 | 0.002 | 0.59 | 0.0 | 0.04 | 14.46 | 0.00 | 2.249 | 10.70 | 0.14 | 2.1 | 97.9 | 0.0 | 2.39 | 1.87 | 0.61 | 0.74 | — | 6873 | 849 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8A6T | 15212 | 2024-04-11 | 2022-06-19 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21132 | 2704 | 12 | 0 | 28 | 0 | 0 | logfile |
✔ | 6GH6 | 0002 | 2024-04-13 | 2018-05-04 | 4.1 | 4.20 | — | 3.9 | 0.004 | 0.91 | 0.0 | 0.05 | 14.50 | 0.00 | 1.934 | 15.53 | 0.38 | 9.7 | 89.3 | 0.9 | -3.61 | 0.85 | 0.74 | — | 3.9 | 0.004 | 0.77 | 0.0 | 0.04 | 15.96 | 0.00 | 2.033 | 11.67 | 0.08 | 9.9 | 89.5 | 0.6 | -1.05 | 1.40 | 0.87 | 0.81 | — | 28051 | 3482 | 8 | 96 | 51 | 0 | 0 | logfile |
✔ | 6DZW | 8941 | 2024-04-06 | 2018-07-05 | 4.3 | 4.31 | 5.22 | 4.9 | 0.004 | 0.87 | 0.0 | 0.09 | 13.75 | 0.01 | 2.052 | 3.87 | 0.36 | 3.2 | 96.8 | 0.0 | -4.99 | 0.45 | 0.53 | — | 4.9 | 0.003 | 0.72 | 0.0 | 0.04 | 13.54 | 0.00 | 2.149 | 16.24 | 0.12 | 4.9 | 95.1 | 0.0 | -1.32 | 1.74 | 0.48 | 0.60 | — | 7829 | 988 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 3JAC | 6343 | 2024-04-09 | 2015-06-05 | 4.8 | 6.42 | — | 9.4 | 0.007 | 1.81 | 3.0 | 0.07 | 10.64 | 0.03 | 1.020 | 57.64 | 4.17 | 5.0 | 90.3 | 4.8 | 1.36 | 0.42 | 0.40 | — | 9.1 | 0.012 | 1.69 | 0.0 | 0.07 | 13.57 | 0.01 | 1.926 | 81.43 | 0.00 | 28.0 | 70.8 | 1.2 | -5.43 | 3.68 | 0.54 | 0.60 | — | 15741 | 1716 | 3 | 0 | 1038 | 0 | 0 | logfile |
✔ | 7WoG | 32651 | 2024-04-05 | 2022-01-21 | 4.06 | 2.95 | — | 2.0 | 0.001 | 0.41 | 0.0 | 0.04 | 8.09 | 0.00 | 2.293 | 10.22 | 3.78 | 8.0 | 92.0 | 0.0 | -3.98 | 0.51 | 0.51 | — | 2.2 | 0.003 | 0.72 | 0.0 | 0.04 | 10.77 | 0.00 | 2.076 | 19.52 | 0.00 | 12.4 | 87.6 | 0.0 | -2.57 | 0.92 | 0.54 | 0.54 | — | 3362 | 433 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VSR | 32114 | 2024-04-08 | 2021-10-27 | 4.5 | 4.64 | 4.47 | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 13.56 | 0.01 | 1.817 | 11.43 | 1.90 | 3.0 | 97.0 | 0.0 | -0.26 | 0.77 | 0.55 | — | 3.4 | 0.006 | 0.72 | 0.0 | 0.04 | 12.99 | 0.01 | 1.670 | 26.37 | 0.00 | 7.1 | 92.8 | 0.0 | -0.89 | 2.68 | 0.88 | 0.78 | — | 66142 | 4040 | 20 | 0 | 12 | 0 | 32736 | logfile |
✔ | 6XE6 | 22144 | 2024-04-06 | 2020-06-12 | 4.53 | 4.61 | — | 4.5 | 0.011 | 1.40 | 2.0 | 0.07 | 14.63 | 0.01 | 1.098 | 10.14 | 1.05 | 11.3 | 87.4 | 1.2 | -4.98 | 0.52 | 0.76 | — | 4.5 | 0.003 | 0.75 | 0.0 | 0.04 | 13.09 | 0.00 | 2.148 | 14.01 | 0.00 | 9.2 | 90.3 | 0.5 | -1.60 | 1.22 | 0.53 | 0.74 | — | 6530 | 826 | 1 | 0 | 6 | 0 | 0 | logfile |