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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7DCo | 30637 | 2023-04-27 | 2020-10-26 | 2.5 | 2.59 | — | 2.6 | 0.010 | 1.11 | 8.0 | 0.08 | 13.06 | 0.01 | 2.079 | 5.90 | 1.87 | 4.4 | 95.1 | 0.5 | -3.91 | 0.53 | 0.65 | 3.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 129875 | 15294 | 91 | 556 | 24 | 1714 | 0 | logfile |
✘ | 7UND | 26621 | 2023-04-27 | 2022-04-10 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 129454 | 8269 | 40 | 269 | 10 | 0 | 61541 | logfile |
✔ | 7B0N | 11969 | 2023-04-27 | 2020-11-20 | 3.7 | 3.22 | 3.70 | 3.2 | 0.018 | 1.20 | 0.0 | 0.45 | 14.97 | 0.01 | 0.019 | 3.79 | 0.07 | 5.5 | 94.4 | 0.1 | -2.92 | 0.59 | 0.74 | 2.70 | 3.2 | 0.005 | 0.86 | 0.0 | 0.13 | 16.23 | 0.00 | 1.907 | 9.08 | 0.17 | 5.4 | 94.6 | 0.0 | -0.26 | 2.50 | 0.60 | 0.75 | 2.36 | 129439 | 8092 | 62 | 0 | 38 | 0 | 64087 | logfile |
✔ | 7LBM | 23255 | 2023-04-27 | 2021-01-08 | 4.8 | 3.22 | — | 2.3 | 0.009 | 1.08 | 22.0 | 0.06 | 16.06 | 0.01 | 1.016 | 31.82 | 1.26 | 11.3 | 88.0 | 0.7 | -3.89 | 0.57 | 0.46 | — | 2.2 | 0.006 | 0.89 | 0.0 | 0.05 | 14.76 | 0.01 | 1.897 | 20.39 | 0.01 | 8.8 | 91.0 | 0.1 | -1.14 | 1.50 | 0.61 | 0.59 | — | 129277 | 15887 | 68 | 128 | 19 | 0 | 0 | logfile |
✔ | 6S05 | 10071 | 2023-04-26 | 2019-06-13 | 3.9 | 3.99 | — | 3.9 | 0.008 | 1.03 | 5.0 | 0.05 | 16.94 | 0.01 | 0.906 | 7.79 | 1.92 | 9.4 | 90.4 | 0.2 | -4.72 | 0.82 | 0.84 | 1.89 | 3.9 | 0.007 | 0.75 | 0.0 | 0.04 | 16.93 | 0.01 | 2.007 | 16.08 | 1.03 | 10.0 | 89.9 | 0.0 | -2.47 | 1.15 | 0.82 | 0.84 | 1.47 | 129144 | 6919 | 53 | 3423 | 218 | 0 | 0 | logfile |
✔ | 6oiG | 20077 | 2023-04-26 | 2019-04-09 | 3.8 | 5.08 | — | 5.0 | 0.011 | 1.45 | 2.0 | 0.07 | 19.62 | 0.01 | 0.087 | 53.69 | 1.20 | 15.9 | 83.9 | 0.2 | -5.09 | 0.77 | 0.48 | 0.04 | 4.9 | 0.010 | 1.00 | 6.0 | 0.05 | 18.66 | 0.01 | 1.416 | 32.12 | 0.74 | 13.7 | 86.2 | 0.1 | -2.80 | 3.10 | 0.89 | 0.86 | 0.08 | 129140 | 6757 | 48 | 3522 | 116 | 0 | 0 | logfile |
✔ | 5GAK | 3227 | 2023-04-26 | 2015-12-09 | 3.88 | 4.13 | — | 19.0 | 0.006 | 0.94 | 0.0 | 0.06 | 20.85 | 0.01 | 0.816 | 23.89 | 0.26 | 9.2 | 90.2 | 0.7 | -3.81 | 0.21 | 0.02 | 0.28 | 3.9 | 0.003 | 0.72 | 0.0 | 0.04 | 18.78 | 0.00 | 2.007 | 19.48 | 0.38 | 8.0 | 91.6 | 0.4 | -2.15 | 1.90 | 0.32 | 0.21 | 0.08 | 128975 | 6434 | 50 | 3597 | 234 | 0 | 0 | logfile |
✔ | 7LiS | 23384 | 2023-04-27 | 2021-01-27 | 2.96 | 3.25 | — | 3.2 | 0.008 | 0.79 | 0.0 | 0.06 | 14.46 | 0.00 | 2.214 | 2.81 | 3.45 | 3.5 | 96.5 | 0.0 | 0.22 | 0.75 | 0.88 | 4.54 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 16.57 | 0.00 | 2.171 | 3.00 | 1.80 | 3.1 | 96.9 | 0.0 | 0.66 | 0.34 | 0.77 | 0.89 | 3.19 | 128880 | 15660 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 6N8M | 0372 | 2023-04-26 | 2018-11-29 | 3.5 | 3.75 | — | 3.6 | 0.006 | 0.86 | 1.0 | 0.04 | 14.88 | 0.01 | 1.297 | 2.87 | 0.43 | 6.6 | 93.0 | 0.4 | -4.51 | 0.81 | 0.88 | 3.49 | 3.6 | 0.007 | 0.70 | 0.0 | 0.04 | 16.00 | 0.00 | 2.020 | 8.66 | 0.65 | 8.4 | 91.4 | 0.2 | -1.48 | 1.24 | 0.81 | 0.89 | 2.52 | 128867 | 6708 | 47 | 3482 | 302 | 0 | 0 | logfile |
✔ | 7YFZ | 33802 | 2023-04-26 | 2022-07-09 | 3.19 | 2.87 | 2.92 | 2.9 | 0.006 | 0.86 | 3.0 | 0.05 | 12.31 | 0.01 | 1.749 | 18.46 | 0.20 | 6.2 | 93.6 | 0.2 | -0.92 | 0.62 | 0.79 | 3.45 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 14.55 | 0.00 | 1.817 | 13.49 | 0.38 | 5.3 | 94.6 | 0.1 | 0.30 | 2.24 | 0.61 | 0.82 | 3.13 | 128850 | 8814 | 42 | 0 | 0 | 0 | 61470 | logfile |
✔ | 7ASP | 11903 | 2023-04-26 | 2020-10-27 | 2.86 | 3.63 | — | 3.1 | 0.008 | 1.05 | 3.0 | 0.10 | 23.04 | 0.00 | 1.802 | 23.94 | 24.23 | 14.8 | 82.3 | 2.8 | -5.21 | 0.88 | 0.86 | 1.55 | 3.1 | 0.007 | 0.76 | 0.0 | 0.04 | 20.82 | 0.00 | 1.967 | 17.31 | 6.10 | 10.3 | 89.6 | 0.1 | -2.34 | 1.02 | 0.87 | 0.89 | 2.01 | 128828 | 4974 | 47 | 4284 | 0 | 0 | 0 | logfile |
✔ | 6QiK | 4560 | 2023-04-26 | 2019-01-20 | 3.1 | 3.35 | — | 3.3 | 0.014 | 0.99 | 2.0 | 0.06 | 15.84 | 0.01 | 1.872 | 3.52 | 0.80 | 8.3 | 91.5 | 0.2 | -4.17 | 0.84 | 0.86 | 3.77 | 3.3 | 0.005 | 0.59 | 0.0 | 0.04 | 15.98 | 0.00 | 2.062 | 7.45 | 0.50 | 6.0 | 94.0 | 0.0 | -1.29 | 0.43 | 0.85 | 0.89 | 3.24 | 128569 | 6843 | 53 | 3423 | 217 | 0 | 0 | logfile |
✔ | 6RW4 | 10021 | 2023-04-26 | 2019-06-03 | 2.97 | 2.14 | 2.98 | 2.8 | 0.008 | 0.67 | 0.0 | 0.08 | 13.18 | 0.01 | 1.650 | 2.42 | 0.06 | 3.0 | 97.0 | 0.1 | -2.57 | 0.85 | 0.84 | 4.78 | 2.8 | 0.004 | 0.65 | 0.0 | 0.04 | 14.61 | 0.01 | 1.675 | 3.45 | 0.88 | 1.9 | 98.0 | 0.0 | 1.04 | 1.98 | 0.88 | 0.88 | 4.29 | 128080 | 5920 | 47 | 955 | 85 | 59 | 59211 | logfile |
✔ | 7U05 | 26254 | 2023-04-27 | 2022-02-17 | 3.7 | 3.56 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 14.14 | 0.01 | 2.019 | 4.02 | 0.07 | 9.7 | 90.2 | 0.1 | -1.55 | 0.51 | 0.72 | 2.03 | 3.5 | 0.004 | 0.62 | 0.0 | 0.04 | 16.50 | 0.00 | 1.833 | 12.03 | 0.77 | 10.6 | 89.3 | 0.1 | -1.25 | 0.57 | 0.53 | 0.74 | 2.00 | 127996 | 7632 | 32 | 0 | 722 | 0 | 62402 | logfile |
✔ | 7ZS5 | 14926 | 2023-04-26 | 2022-05-06 | 3.2 | 3.53 | 3.32 | 3.3 | 0.002 | 0.55 | 0.0 | 0.03 | 16.11 | 0.00 | 1.329 | 12.45 | 0.02 | 2.5 | 97.1 | 0.4 | -1.60 | 0.84 | 0.78 | 1.80 | 3.3 | 0.008 | 0.84 | 0.0 | 0.05 | 17.43 | 0.01 | 1.851 | 20.60 | 1.03 | 9.6 | 90.0 | 0.4 | -1.91 | 0.41 | 0.86 | 0.82 | 1.68 | 127849 | 6416 | 50 | 3603 | 24 | 0 | 0 | logfile |
✔ | 7oHU | 12909 | 2023-04-26 | 2021-05-11 | 3.7 | 4.68 | 3.77 | 3.4 | 0.008 | 0.53 | 1.0 | 0.03 | 16.12 | 0.00 | 1.811 | 5.44 | 0.45 | 3.5 | 96.5 | 0.0 | 1.01 | 0.83 | 0.76 | 1.33 | 3.4 | 0.007 | 0.58 | 1.0 | 0.03 | 17.35 | 0.00 | 1.751 | 15.03 | 0.22 | 7.3 | 92.6 | 0.0 | -0.57 | 1.32 | 0.85 | 0.81 | 1.56 | 127652 | 4202 | 29 | 1840 | 2 | 0 | 54773 | logfile |
✔ | 7WPS | 32690 | 2023-04-27 | 2022-01-24 | 4.32 | 4.69 | — | 4.2 | 0.007 | 0.92 | 0.0 | 0.06 | 10.45 | 0.01 | 1.790 | 3.99 | 0.35 | 10.0 | 89.8 | 0.2 | -4.55 | 0.72 | 0.47 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 11.70 | 0.00 | 2.104 | 14.22 | 0.12 | 7.5 | 92.5 | 0.0 | -1.91 | 2.69 | 0.91 | 0.80 | — | 127624 | 16646 | 56 | 0 | 98 | 0 | 0 | logfile |
✔ | 7LiM | 23383 | 2023-04-26 | 2021-01-27 | 2.75 | 2.92 | — | 2.9 | 0.007 | 1.05 | 60.0 | 0.06 | 15.45 | 0.01 | 2.436 | 3.47 | 3.49 | 3.5 | 96.5 | 0.0 | -2.97 | 0.74 | 0.84 | 3.83 | 3.0 | 0.005 | 0.87 | 0.0 | 0.05 | 18.05 | 0.01 | 2.272 | 3.74 | 2.40 | 3.8 | 96.2 | 0.0 | -2.46 | 0.30 | 0.75 | 0.86 | 2.97 | 127440 | 15480 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7Lii | 23379 | 2023-04-26 | 2021-01-27 | 3.55 | 3.83 | — | 3.7 | 0.007 | 0.90 | 0.0 | 0.06 | 13.86 | 0.00 | 2.299 | 5.65 | 0.87 | 9.9 | 90.1 | 0.0 | -2.72 | 0.82 | 0.84 | 2.16 | 3.7 | 0.006 | 0.75 | 0.0 | 0.05 | 15.30 | 0.00 | 2.260 | 3.23 | 0.42 | 10.3 | 89.7 | 0.0 | -2.13 | 0.35 | 0.83 | 0.84 | 1.83 | 127320 | 15480 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7LiT | 23385 | 2023-04-26 | 2021-01-27 | 2.53 | 2.69 | — | 2.8 | 0.008 | 0.76 | 0.0 | 0.05 | 13.58 | 0.00 | 2.309 | 1.69 | 0.44 | 3.9 | 96.1 | 0.0 | 0.35 | 0.71 | 0.85 | 4.23 | 2.7 | 0.003 | 0.55 | 0.0 | 0.04 | 16.23 | 0.00 | 2.168 | 2.50 | 1.36 | 3.3 | 96.7 | 0.0 | 0.89 | 1.75 | 0.73 | 0.88 | 3.70 | 126840 | 15480 | 60 | 0 | 60 | 0 | 0 | logfile |