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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WDL | 21640 | 2024-03-26 | 2020-03-31 | 3.7 | 4.08 | 4.12 | 4.0 | 0.006 | 0.97 | 0.0 | 0.08 | 21.94 | 0.01 | 1.312 | 9.22 | 0.41 | 10.7 | 87.5 | 1.9 | -4.85 | 0.81 | 0.81 | 1.06 | 4.0 | 0.004 | 0.69 | 0.0 | 0.04 | 23.36 | 0.01 | 1.986 | 21.13 | 6.46 | 10.0 | 89.8 | 0.2 | -2.23 | 1.50 | 0.83 | 0.83 | 0.83 | 150220 | 6025 | 60 | 4810 | 0 | 0 | 0 | logfile |
✔ | 6WDM | 21641 | 2024-03-26 | 2020-03-31 | 3.6 | 3.93 | 3.85 | 3.8 | 0.006 | 0.96 | 0.0 | 0.08 | 21.96 | 0.01 | 1.315 | 8.41 | 0.61 | 10.3 | 88.0 | 1.7 | -4.77 | 0.82 | 0.83 | 1.11 | 3.8 | 0.007 | 0.88 | 4.0 | 0.04 | 23.52 | 0.01 | 1.820 | 27.88 | 7.82 | 11.8 | 88.0 | 0.2 | -2.57 | 0.68 | 0.84 | 0.85 | 1.08 | 150220 | 6025 | 58 | 4810 | 0 | 0 | 0 | logfile |
✔ | 6WDJ | 21638 | 2024-03-26 | 2020-03-31 | 3.7 | 4.11 | 4.20 | 4.0 | 0.006 | 0.96 | 0.0 | 0.08 | 21.93 | 0.01 | 2.162 | 8.59 | 0.41 | 11.0 | 87.3 | 1.7 | -4.77 | 0.81 | 0.81 | 1.03 | 4.0 | 0.004 | 0.69 | 0.0 | 0.04 | 23.43 | 0.01 | 2.045 | 22.79 | 6.81 | 10.1 | 89.8 | 0.1 | -2.48 | 1.51 | 0.83 | 0.83 | 0.62 | 150211 | 6024 | 59 | 4810 | 0 | 0 | 0 | logfile |
✔ | 6YL3 | 10835 | 2024-03-27 | 2020-04-06 | 1.98 | 2.04 | 1.99 | 2.0 | 0.067 | 3.60 | 246.0 | 0.36 | 16.31 | 0.02 | 1.877 | 4.50 | 2.74 | 5.3 | 94.4 | 0.4 | -2.46 | 0.78 | 0.83 | 6.40 | 2.0 | 0.004 | 0.74 | 0.0 | 0.05 | 16.13 | 0.01 | 1.767 | 5.13 | 1.70 | 3.8 | 96.0 | 0.1 | -0.04 | 0.82 | 0.81 | 0.86 | 6.97 | 150156 | 9552 | 84 | 0 | 24 | 3672 | 73044 | logfile |
✔ | 6WDC | 21631 | 2024-03-26 | 2020-03-31 | 4.2 | 4.07 | 4.55 | 3.9 | 0.006 | 1.01 | 0.0 | 0.08 | 22.00 | 0.01 | 2.262 | 11.85 | 1.14 | 13.3 | 84.6 | 2.1 | -5.10 | 0.77 | 0.73 | — | 3.9 | 0.005 | 0.83 | 0.0 | 0.04 | 23.70 | 0.01 | 1.973 | 31.36 | 0.08 | 13.4 | 86.5 | 0.1 | -3.35 | 1.58 | 0.80 | 0.77 | — | 150149 | 6024 | 59 | 4807 | 0 | 0 | 0 | logfile |
✔ | 6WDB | 21630 | 2024-03-26 | 2020-03-31 | 4.0 | 4.30 | 5.11 | 4.1 | 0.006 | 0.99 | 0.0 | 0.08 | 21.96 | 0.01 | 2.211 | 11.44 | 0.77 | 11.9 | 86.2 | 1.9 | -4.97 | 0.78 | 0.72 | — | 4.1 | 0.004 | 0.81 | 0.0 | 0.04 | 24.35 | 0.01 | 2.000 | 33.03 | 5.89 | 12.2 | 87.7 | 0.2 | -3.28 | 0.91 | 0.81 | 0.77 | — | 150149 | 6024 | 59 | 4807 | 0 | 0 | 0 | logfile |
✔ | 6WDH | 21636 | 2024-03-26 | 2020-03-31 | 4.3 | 3.96 | 5.24 | 3.9 | 0.006 | 1.00 | 0.0 | 0.08 | 21.93 | 0.01 | 2.227 | 11.41 | 1.02 | 12.5 | 85.3 | 2.1 | -4.94 | 0.74 | 0.68 | — | 3.8 | 0.005 | 0.74 | 0.0 | 0.04 | 23.08 | 0.01 | 2.024 | 22.62 | 0.04 | 10.8 | 89.1 | 0.1 | -2.55 | 1.38 | 0.82 | 0.82 | — | 150149 | 6024 | 59 | 4807 | 0 | 0 | 0 | logfile |
✔ | 8oJ0 | 16902 | 2024-03-26 | 2023-03-23 | 3.3 | 3.76 | 3.22 | 3.3 | 0.002 | 0.39 | 0.0 | 0.03 | 21.93 | 0.00 | 1.860 | 3.45 | 0.08 | 2.2 | 97.8 | 0.0 | 2.39 | 0.86 | 0.85 | 2.59 | 3.3 | 0.006 | 0.58 | 0.0 | 0.04 | 21.91 | 0.00 | 1.818 | 7.18 | 1.97 | 3.4 | 96.6 | 0.0 | 1.22 | 0.76 | 0.88 | 0.91 | 2.97 | 150098 | 8662 | 66 | 3742 | 225 | 0 | 0 | logfile |
✔ | 7SA4 | 24944 | 2024-03-26 | 2021-09-22 | 2.55 | 2.59 | — | 2.5 | 0.011 | 0.85 | 1.0 | 0.07 | 23.37 | 0.02 | 1.125 | 11.36 | 0.06 | 3.6 | 96.3 | 0.0 | -0.37 | 0.76 | 0.90 | 4.18 | 2.5 | 0.006 | 0.68 | 0.0 | 0.04 | 23.43 | 0.01 | 1.022 | 10.34 | 3.35 | 3.5 | 96.5 | 0.0 | 0.33 | 1.51 | 0.75 | 0.90 | 3.62 | 150065 | 6175 | 71 | 4724 | 441 | 2 | 0 | logfile |
✘ | 8iR1 | 35672 | 2024-03-26 | 2023-03-17 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 150033 | 8866 | 54 | 3644 | 2 | 0 | 0 | logfile |
✔ | 7UNW | 26635 | 2024-03-26 | 2022-04-11 | 2.6 | 3.21 | 2.65 | 3.0 | 0.006 | 0.68 | 0.0 | 0.04 | 22.87 | 0.02 | 1.876 | 6.31 | 0.02 | 6.8 | 92.8 | 0.3 | -1.25 | 0.90 | 0.88 | 3.37 | 3.0 | 0.004 | 0.69 | 0.0 | 0.04 | 22.83 | 0.01 | 1.742 | 8.13 | 2.91 | 6.6 | 93.1 | 0.3 | -0.51 | 0.91 | 0.88 | 0.93 | 2.91 | 149945 | 6534 | 85 | 4605 | 799 | 352 | 0 | logfile |
✔ | 7NWT | 12635 | 2024-03-26 | 2021-03-17 | 2.66 | 2.63 | — | 2.6 | 0.011 | 0.84 | 0.0 | 0.05 | 22.59 | 0.02 | 1.145 | 4.87 | 2.95 | 2.6 | 97.4 | 0.0 | -2.35 | 0.85 | 0.88 | 4.38 | 2.7 | 0.002 | 0.59 | 0.0 | 0.03 | 22.65 | 0.01 | 1.177 | 7.32 | 3.20 | 2.8 | 97.2 | 0.0 | 0.27 | 0.30 | 0.87 | 0.88 | 3.41 | 149932 | 6355 | 74 | 4641 | 439 | 2 | 0 | logfile |
✔ | 5MDV | 3489 | 2024-03-26 | 2016-11-13 | 2.97 | 3.05 | 2.97 | 3.0 | 0.008 | 1.26 | 22.0 | 0.10 | 23.70 | 0.02 | 1.257 | 3.21 | 7.74 | 4.9 | 94.7 | 0.4 | -1.77 | 0.79 | 0.88 | 3.19 | 3.0 | 0.004 | 0.65 | 1.0 | 0.04 | 23.11 | 0.01 | 1.752 | 9.09 | 4.16 | 3.1 | 96.9 | 0.0 | 0.38 | 0.44 | 0.82 | 0.89 | 2.95 | 149892 | 6382 | 67 | 4638 | 442 | 2 | 0 | logfile |
✔ | 6J0N | 9765 | 2024-03-27 | 2018-12-25 | 3.5 | 3.55 | — | 3.5 | 0.007 | 1.09 | 0.0 | 0.06 | 16.27 | 0.01 | 2.196 | 6.17 | 2.74 | 6.5 | 93.3 | 0.1 | -4.63 | 0.69 | 0.80 | 2.09 | 3.5 | 0.004 | 0.85 | 10.0 | 0.05 | 17.27 | 0.00 | 1.648 | 12.40 | 3.69 | 5.6 | 94.4 | 0.0 | -1.60 | 0.70 | 0.68 | 0.82 | 1.71 | 149886 | 19044 | 54 | 0 | 0 | 0 | 0 | logfile |
✘ | 8iPD | 35639 | 2024-03-26 | 2023-03-14 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 149878 | 8564 | 53 | 3756 | 2 | 0 | 0 | logfile |
✔ | 7SS9 | 25405 | 2024-03-26 | 2021-11-10 | 3.9 | 4.09 | 4.66 | 4.0 | 0.010 | 1.07 | 0.0 | 0.09 | 23.53 | 0.01 | 2.130 | 12.90 | 1.63 | 11.7 | 87.8 | 0.5 | -4.79 | 0.76 | 0.73 | 0.63 | 4.0 | 0.006 | 0.89 | 0.0 | 0.04 | 24.41 | 0.01 | 1.947 | 31.09 | 6.57 | 13.5 | 86.3 | 0.3 | -3.18 | 0.65 | 0.77 | 0.73 | 0.59 | 149808 | 6171 | 57 | 4736 | 0 | 0 | 0 | logfile |
✔ | 8AGU | 15424 | 2024-03-26 | 2022-07-20 | 2.7 | 3.26 | 2.76 | 2.7 | 0.006 | 0.90 | 6.0 | 0.05 | 21.59 | 0.01 | 1.041 | 6.23 | 1.81 | 3.6 | 96.3 | 0.1 | 0.14 | 0.92 | 0.88 | 3.27 | 2.7 | 0.005 | 0.69 | 5.0 | 0.04 | 21.61 | 0.01 | 1.922 | 10.25 | 2.38 | 4.3 | 95.7 | 0.0 | 0.57 | 0.48 | 0.93 | 0.91 | 3.23 | 149748 | 9427 | 68 | 3568 | 38 | 0 | 0 | logfile |
✔ | 8AGX | 15427 | 2024-03-26 | 2022-07-20 | 2.4 | 3.19 | 2.52 | 2.5 | 0.006 | 0.93 | 5.0 | 0.05 | 21.77 | 0.01 | 1.296 | 4.14 | 2.04 | 3.7 | 96.2 | 0.1 | -0.44 | 0.92 | 0.89 | 3.34 | 2.6 | 0.004 | 0.63 | 1.0 | 0.04 | 21.68 | 0.00 | 1.910 | 8.64 | 2.02 | 4.4 | 95.6 | 0.0 | 0.51 | 0.46 | 0.94 | 0.93 | 3.42 | 149706 | 9204 | 68 | 3640 | 41 | 0 | 0 | logfile |
✔ | 7K50 | 22669 | 2024-03-26 | 2020-09-16 | 3.4 | 3.90 | — | 3.3 | 0.010 | 1.13 | 0.0 | 0.09 | 22.61 | 0.01 | 2.194 | 19.55 | 1.75 | 13.3 | 85.0 | 1.7 | -4.02 | 0.85 | 0.84 | 1.47 | 3.3 | 0.004 | 0.67 | 1.0 | 0.04 | 23.34 | 0.00 | 1.969 | 16.91 | 5.99 | 12.3 | 87.5 | 0.3 | -2.35 | 1.17 | 0.86 | 0.86 | 0.94 | 149700 | 5945 | 60 | 4811 | 0 | 0 | 0 | logfile |
✔ | 7K53 | 22672 | 2024-03-26 | 2020-09-16 | 3.2 | 3.74 | — | 3.1 | 0.009 | 1.10 | 0.0 | 0.09 | 22.55 | 0.01 | 1.865 | 18.16 | 1.50 | 14.1 | 84.8 | 1.1 | -3.74 | 0.87 | 0.85 | 1.69 | 3.1 | 0.005 | 0.69 | 0.0 | 0.04 | 23.23 | 0.01 | 1.983 | 16.32 | 6.44 | 12.1 | 87.8 | 0.1 | -2.20 | 0.50 | 0.88 | 0.88 | 1.56 | 149698 | 5945 | 60 | 4811 | 0 | 0 | 0 | logfile |