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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6TE0 | 10473 | 2023-04-29 | 2019-11-10 | 3.92 | 3.97 | 3.90 | 3.8 | 0.007 | 0.81 | 0.0 | 0.05 | 11.47 | 0.01 | 1.432 | 3.80 | 0.00 | 4.0 | 95.9 | 0.0 | -3.76 | 0.80 | 0.81 | 2.25 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 14.19 | 0.00 | 1.737 | 11.29 | 0.10 | 4.9 | 95.1 | 0.0 | -0.65 | 0.87 | 0.80 | 0.82 | 1.98 | 79188 | 5136 | 29 | 0 | 11 | 0 | 39835 | logfile |
✔ | 8B0G | 15780 | 2023-04-29 | 2022-09-07 | 3.3 | 3.50 | 3.22 | 3.1 | 0.009 | 0.80 | 0.0 | 0.07 | 14.55 | 0.01 | 1.687 | 5.69 | 0.34 | 5.2 | 94.8 | 0.0 | -0.94 | 0.84 | 0.81 | 2.69 | 3.1 | 0.006 | 0.64 | 0.0 | 0.05 | 14.55 | 0.00 | 1.916 | 7.41 | 0.20 | 5.5 | 94.5 | 0.0 | -0.45 | 0.86 | 0.86 | 0.86 | 2.61 | 79270 | 5113 | 15 | 0 | 10 | 0 | 38789 | logfile |
✔ | 7UiZ | 26558 | 2023-04-28 | 2022-03-29 | 3.24 | 3.45 | — | 3.4 | 0.004 | 0.75 | 0.0 | 0.05 | 13.43 | 0.00 | 2.014 | 2.79 | 0.00 | 0.1 | 99.9 | 0.0 | -1.03 | 0.60 | 0.81 | 2.98 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.75 | 0.00 | 1.831 | 9.23 | 0.22 | 2.7 | 97.3 | 0.0 | 0.26 | 0.91 | 0.60 | 0.85 | 2.99 | 76521 | 4837 | 20 | 0 | 22 | 0 | 38390 | logfile |
✔ | 7UJ0 | 26559 | 2023-04-28 | 2022-03-29 | 3.26 | 3.50 | — | 3.4 | 0.005 | 0.83 | 0.0 | 0.04 | 14.20 | 0.00 | 2.005 | 3.09 | 0.00 | 0.5 | 99.5 | 0.0 | -1.04 | 0.61 | 0.82 | 3.29 | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 16.73 | 0.00 | 1.774 | 10.35 | 0.34 | 3.5 | 96.5 | 0.0 | -0.01 | 0.72 | 0.62 | 0.86 | 2.98 | 76314 | 4823 | 20 | 0 | 21 | 0 | 38308 | logfile |
✔ | 7UiX | 26556 | 2023-04-28 | 2022-03-29 | 3.24 | 3.26 | — | 3.3 | 0.004 | 0.79 | 0.0 | 0.04 | 14.12 | 0.00 | 2.013 | 2.99 | 0.02 | 0.1 | 99.9 | 0.0 | -0.81 | 0.62 | 0.80 | 2.80 | 3.3 | 0.012 | 0.73 | 0.0 | 0.04 | 16.82 | 0.01 | 1.703 | 9.66 | 0.32 | 3.3 | 96.7 | 0.0 | 0.33 | 0.82 | 0.60 | 0.84 | 2.84 | 76307 | 4820 | 20 | 0 | 23 | 0 | 38286 | logfile |
✔ | 7UiY | 26557 | 2023-04-28 | 2022-03-29 | 3.22 | 3.19 | — | 3.2 | 0.006 | 0.86 | 0.0 | 0.04 | 14.26 | 0.00 | 1.981 | 3.47 | 0.00 | 0.3 | 99.7 | 0.0 | -0.25 | 0.60 | 0.81 | 3.14 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.78 | 0.00 | 1.873 | 9.28 | 0.15 | 2.7 | 97.3 | 0.0 | 0.45 | 0.68 | 0.61 | 0.85 | 2.98 | 76262 | 4819 | 20 | 0 | 17 | 0 | 38283 | logfile |
✔ | 7UiV | 26554 | 2023-04-28 | 2022-03-29 | 3.38 | 3.40 | — | 3.4 | 0.004 | 0.81 | 0.0 | 0.05 | 14.78 | 0.00 | 2.004 | 2.73 | 0.00 | 0.3 | 99.7 | 0.0 | 1.05 | 0.59 | 0.77 | 2.52 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 17.24 | 0.00 | 1.819 | 9.49 | 0.27 | 2.7 | 97.3 | 0.0 | 0.47 | 1.24 | 0.60 | 0.83 | 2.47 | 76152 | 4805 | 20 | 0 | 18 | 0 | 38252 | logfile |
✔ | 7UiW | 26555 | 2023-04-28 | 2022-03-29 | 3.33 | 3.27 | — | 3.3 | 0.004 | 0.77 | 0.0 | 0.04 | 13.74 | 0.00 | 2.005 | 2.75 | 0.02 | 0.3 | 99.7 | 0.0 | -0.17 | 0.59 | 0.75 | 2.41 | 3.3 | 0.003 | 0.55 | 0.0 | 0.04 | 16.63 | 0.00 | 1.810 | 9.34 | 0.47 | 2.6 | 97.4 | 0.0 | 0.28 | 0.83 | 0.61 | 0.82 | 2.57 | 75891 | 4792 | 19 | 0 | 17 | 0 | 38115 | logfile |
✔ | 7oXo | 13102 | 2023-04-28 | 2021-06-22 | 3.9 | 4.39 | — | 4.1 | 0.013 | 1.34 | 0.0 | 0.07 | 13.05 | 0.01 | 1.986 | 8.38 | 0.02 | 9.3 | 90.7 | 0.0 | -2.64 | 0.87 | 0.81 | 1.07 | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 13.93 | 0.00 | 1.938 | 9.72 | 0.20 | 4.5 | 95.5 | 0.0 | -0.51 | 1.14 | 0.86 | 0.80 | 0.97 | 74729 | 4656 | 12 | 0 | 6 | 0 | 37715 | logfile |
✔ | 7NGL | 12315 | 2023-04-28 | 2021-02-09 | 3.8 | 4.04 | — | 3.9 | 0.012 | 1.50 | 0.0 | 0.07 | 13.27 | 0.01 | 2.054 | 6.08 | 0.02 | 9.2 | 90.8 | 0.0 | -2.53 | 0.76 | 0.74 | 1.38 | 3.8 | 0.003 | 0.61 | 0.0 | 0.04 | 14.40 | 0.00 | 1.910 | 8.52 | 0.02 | 4.9 | 95.1 | 0.0 | -0.81 | 0.66 | 0.78 | 0.77 | 1.27 | 74735 | 4656 | 12 | 0 | 6 | 0 | 37715 | logfile |
✔ | 7NG4 | 12307 | 2023-04-28 | 2021-02-08 | 4.4 | 5.07 | 4.36 | 3.9 | 0.010 | 1.37 | 0.0 | 0.06 | 13.12 | 0.01 | 1.977 | 6.38 | 0.12 | 7.3 | 92.7 | 0.0 | -2.19 | 0.89 | 0.78 | — | 3.9 | 0.003 | 0.57 | 0.0 | 0.04 | 12.78 | 0.00 | 1.773 | 12.19 | 0.00 | 4.7 | 95.3 | 0.0 | -0.92 | 0.97 | 0.88 | 0.79 | — | 74624 | 4656 | 13 | 0 | 31 | 0 | 37485 | logfile |
✔ | 7NFY | 12306 | 2023-04-28 | 2021-02-08 | 3.9 | 4.30 | 3.98 | 3.9 | 0.011 | 1.27 | 1.0 | 0.07 | 12.77 | 0.01 | 2.011 | 5.76 | 0.00 | 8.5 | 91.5 | 0.0 | -2.41 | 0.85 | 0.79 | 1.54 | 3.9 | 0.003 | 0.55 | 0.0 | 0.05 | 13.71 | 0.00 | 1.759 | 10.00 | 0.10 | 4.6 | 95.4 | 0.0 | -0.74 | 0.38 | 0.85 | 0.79 | 1.39 | 74644 | 4656 | 13 | 0 | 35 | 0 | 37485 | logfile |
✔ | 7NG5 | 12308 | 2023-04-28 | 2021-02-08 | 3.8 | 4.19 | 3.88 | 4.0 | 0.013 | 1.31 | 0.0 | 0.07 | 13.35 | 0.01 | 1.977 | 5.18 | 0.15 | 7.6 | 92.4 | 0.0 | -2.18 | 0.79 | 0.80 | 1.59 | 4.0 | 0.003 | 0.54 | 0.0 | 0.04 | 14.15 | 0.00 | 1.730 | 8.85 | 0.05 | 5.2 | 94.8 | 0.0 | -0.52 | 0.90 | 0.79 | 0.80 | 1.25 | 74579 | 4656 | 13 | 0 | 22 | 0 | 37485 | logfile |
✔ | 7NJL | 12382 | 2023-04-28 | 2021-02-17 | 2.71 | 2.49 | — | 2.2 | 0.003 | 0.51 | 0.0 | 0.04 | 14.71 | 0.00 | 2.057 | 6.48 | 0.00 | 2.4 | 97.6 | 0.0 | 1.54 | 0.85 | 0.86 | 3.77 | 2.2 | 0.004 | 0.54 | 0.0 | 0.04 | 16.14 | 0.00 | 1.731 | 7.10 | 0.65 | 2.7 | 97.2 | 0.0 | 1.49 | 0.33 | 0.86 | 0.88 | 3.74 | 74775 | 4944 | 31 | 0 | 11 | 16 | 37414 | logfile |
✔ | 7NJK | 12377 | 2023-04-28 | 2021-02-17 | 2.52 | 2.49 | — | 2.2 | 0.004 | 0.51 | 0.0 | 0.04 | 14.52 | 0.00 | 2.061 | 4.73 | 0.00 | 2.4 | 97.6 | 0.1 | 1.64 | 0.85 | 0.87 | 4.35 | 2.2 | 0.003 | 0.50 | 0.0 | 0.04 | 15.66 | 0.00 | 1.782 | 5.45 | 0.31 | 2.2 | 97.7 | 0.0 | 1.90 | 1.68 | 0.86 | 0.89 | 4.10 | 74650 | 4934 | 31 | 0 | 11 | 16 | 37359 | logfile |
✔ | 7NJQ | 12407 | 2023-04-28 | 2021-02-17 | 2.67 | 2.56 | — | 2.2 | 0.004 | 0.52 | 0.0 | 0.04 | 14.45 | 0.00 | 1.901 | 5.62 | 0.00 | 2.1 | 97.8 | 0.1 | 1.78 | 0.85 | 0.87 | 4.10 | 2.2 | 0.005 | 0.55 | 0.0 | 0.04 | 15.81 | 0.00 | 1.670 | 5.87 | 0.65 | 2.5 | 97.5 | 0.1 | 1.45 | 0.90 | 0.86 | 0.89 | 4.13 | 74669 | 4936 | 31 | 0 | 11 | 16 | 37357 | logfile |
✔ | 7NJS | 12417 | 2023-04-28 | 2021-02-17 | 2.46 | 2.50 | — | 2.2 | 0.002 | 0.50 | 0.0 | 0.04 | 16.68 | 0.00 | 1.978 | 4.14 | 1.22 | 1.7 | 98.3 | 0.0 | 2.22 | 0.85 | 0.88 | 4.05 | 2.2 | 0.005 | 0.54 | 0.0 | 0.04 | 16.79 | 0.00 | 1.675 | 4.83 | 1.64 | 2.6 | 97.4 | 0.0 | 1.82 | 0.24 | 0.86 | 0.90 | 4.19 | 74642 | 4932 | 31 | 0 | 11 | 16 | 37346 | logfile |
✔ | 7NJo | 12397 | 2023-04-28 | 2021-02-17 | 2.92 | 2.77 | — | 2.7 | 0.004 | 0.53 | 0.0 | 0.04 | 14.87 | 0.00 | 2.080 | 8.25 | 0.00 | 2.9 | 97.1 | 0.0 | 1.46 | 0.85 | 0.85 | 3.17 | 2.6 | 0.004 | 0.56 | 0.0 | 0.04 | 16.40 | 0.00 | 1.698 | 9.09 | 0.78 | 2.8 | 97.2 | 0.0 | 1.56 | 0.37 | 0.86 | 0.88 | 3.10 | 74641 | 4934 | 31 | 0 | 11 | 16 | 37345 | logfile |
✔ | 7NJM | 12387 | 2023-04-28 | 2021-02-17 | 2.84 | 2.63 | — | 2.7 | 0.003 | 0.50 | 0.0 | 0.04 | 14.84 | 0.00 | 1.935 | 6.68 | 0.00 | 2.7 | 97.3 | 0.0 | 1.41 | 0.85 | 0.86 | 3.49 | 2.7 | 0.003 | 0.50 | 0.0 | 0.04 | 16.33 | 0.00 | 1.756 | 6.60 | 0.49 | 2.3 | 97.6 | 0.0 | 1.55 | 0.90 | 0.86 | 0.88 | 3.33 | 74611 | 4932 | 31 | 0 | 11 | 16 | 37328 | logfile |
✔ | 7NJR | 12412 | 2023-04-27 | 2021-02-17 | 2.56 | 2.54 | — | 2.4 | 0.004 | 0.52 | 0.0 | 0.04 | 14.46 | 0.00 | 1.940 | 5.25 | 0.00 | 3.0 | 96.9 | 0.1 | 1.36 | 0.85 | 0.87 | 4.22 | 2.4 | 0.003 | 0.51 | 0.0 | 0.04 | 15.61 | 0.00 | 1.742 | 5.57 | 0.57 | 2.9 | 97.0 | 0.1 | 1.66 | 0.88 | 0.86 | 0.89 | 4.07 | 74587 | 4930 | 31 | 0 | 11 | 16 | 37321 | logfile |