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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5WE4 | 8814 | 2024-03-02 | 2017-07-07 | 3.1 | 3.04 | 3.02 | 3.0 | 0.008 | 1.14 | 3.0 | 0.10 | 24.21 | 0.02 | 1.575 | 3.75 | 3.52 | 9.8 | 87.9 | 2.3 | -4.03 | 0.78 | 0.81 | 2.62 | 3.0 | 0.005 | 0.78 | 0.0 | 0.04 | 23.77 | 0.01 | 1.021 | 11.61 | 5.67 | 8.3 | 91.2 | 0.5 | -1.85 | 3.97 | 0.84 | 0.83 | 2.36 | 155067 | 6324 | 117 | 4802 | 1620 | 996 | 0 | logfile |
✔ | 8U66 | 41946 | 2024-03-21 | 2023-09-13 | 2.21 | 2.31 | 2.31 | 2.3 | 0.004 | 0.56 | 0.0 | 0.09 | 16.75 | 0.00 | 1.869 | 2.66 | 0.28 | 3.4 | 96.6 | 0.0 | 2.01 | 0.71 | 0.83 | 4.97 | 2.3 | 0.002 | 0.54 | 0.0 | 0.04 | 17.14 | 0.00 | 1.939 | 5.62 | 2.01 | 3.2 | 96.8 | 0.0 | 1.41 | 0.26 | 0.77 | 0.87 | 5.06 | 29365 | 3584 | 24 | 0 | 16 | 981 | 0 | logfile |
✔ | 6TSK | 10564 | 2024-03-22 | 2019-12-20 | 2.3 | 2.36 | — | 2.3 | 0.012 | 1.54 | 24.0 | 0.11 | 16.53 | 0.02 | 1.535 | 1.57 | 2.42 | 2.9 | 97.0 | 0.1 | -1.00 | 0.84 | 0.94 | 7.33 | 2.3 | 0.002 | 0.53 | 0.0 | 0.04 | 16.88 | 0.00 | 2.048 | 3.26 | 0.98 | 2.7 | 97.3 | 0.0 | 0.84 | 0.79 | 0.80 | 0.91 | 6.40 | 33632 | 4060 | 12 | 0 | 8 | 964 | 0 | logfile |
✔ | 6ZGL | 11210 | 2024-03-16 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.72 | 0.00 | 2.115 | 4.79 | 1.24 | 0.9 | 99.1 | 0.0 | 3.47 | 0.72 | 0.75 | 0.83 | 7.06 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 7DD9 | 30650 | 2024-03-23 | 2020-10-28 | 2.4 | 2.49 | 2.37 | 2.4 | 0.007 | 0.71 | 0.0 | 0.05 | 15.88 | 0.00 | 1.932 | 8.69 | 1.93 | 7.1 | 92.9 | 0.0 | -1.19 | 0.79 | 0.87 | 4.70 | 2.4 | 0.004 | 0.63 | 0.0 | 0.05 | 16.15 | 0.00 | 1.948 | 9.60 | 2.08 | 6.1 | 93.9 | 0.0 | -0.92 | 0.21 | 0.79 | 0.88 | 4.66 | 37149 | 4516 | 12 | 0 | 12 | 949 | 0 | logfile |
✘ | 8CGi | 16644 | 2024-03-17 | 2023-02-04 | 1.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17553 | 841 | 20 | 460 | 43 | 948 | 0 | logfile |
✔ | 6Z0V | 11024 | 2024-03-24 | 2020-05-11 | 2.6 | 2.68 | — | 2.6 | 0.010 | 0.87 | 0.0 | 0.06 | 13.09 | 0.01 | 1.818 | 9.89 | 0.27 | 5.3 | 94.7 | 0.0 | -2.69 | 0.73 | 0.87 | 5.10 | 2.7 | 0.003 | 0.59 | 0.0 | 0.04 | 14.81 | 0.00 | 2.003 | 7.48 | 0.87 | 2.3 | 97.7 | 0.0 | 0.41 | 0.91 | 0.74 | 0.86 | 4.27 | 42972 | 5424 | 36 | 0 | 12 | 936 | 0 | logfile |
✔ | 7oJ5 | 12938 | 2024-03-23 | 2021-05-13 | 2.4 | 2.43 | — | 2.4 | 0.002 | 0.53 | 0.0 | 0.04 | 16.61 | 0.00 | 2.177 | 1.81 | 1.95 | 1.6 | 98.4 | 0.0 | -0.94 | 0.76 | 0.87 | 3.97 | 2.4 | 0.005 | 0.84 | 0.0 | 0.05 | 17.15 | 0.00 | 2.112 | 2.52 | 2.41 | 2.7 | 97.3 | 0.0 | 0.64 | 0.35 | 0.78 | 0.89 | 4.67 | 35323 | 4416 | 72 | 0 | 48 | 931 | 0 | logfile |
✔ | 5WDT | 8813 | 2024-03-03 | 2017-07-06 | 3.0 | 3.20 | 3.19 | 3.2 | 0.008 | 1.13 | 2.0 | 0.10 | 24.24 | 0.02 | 1.527 | 4.72 | 3.29 | 9.7 | 88.1 | 2.3 | -4.08 | 0.77 | 0.80 | 2.46 | 3.1 | 0.007 | 0.82 | 3.0 | 0.04 | 23.70 | 0.01 | 1.741 | 10.82 | 5.11 | 8.6 | 90.8 | 0.5 | -1.45 | 1.26 | 0.84 | 0.85 | 2.33 | 155275 | 6324 | 125 | 4802 | 1910 | 920 | 0 | logfile |
✘ | 8DBX | 27316 | 2024-03-17 | 2022-06-14 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16968 | 1998 | 12 | 0 | 10 | 914 | 0 | logfile |
✔ | 7R44 | 14266 | 2024-03-15 | 2022-02-08 | 2.4 | 2.43 | — | 2.4 | 0.007 | 0.81 | 0.0 | 0.84 | 16.35 | 0.01 | 1.908 | 3.31 | 0.00 | 2.5 | 97.5 | 0.0 | 0.40 | 0.70 | 0.90 | 6.05 | 2.5 | 0.007 | 1.33 | 1.0 | 0.26 | 16.49 | 0.00 | 1.880 | 4.75 | 1.08 | 1.8 | 98.2 | 0.0 | 1.63 | 0.31 | 0.70 | 0.91 | 5.24 | 68213 | 8163 | 113 | 0 | 50 | 905 | 0 | logfile |
✔ | 8UHi | 42281 | 2024-03-23 | 2023-10-09 | 2.35 | 2.20 | 2.40 | 2.2 | 0.004 | 0.71 | 0.0 | 0.04 | 17.49 | 0.01 | 1.205 | 13.93 | 1.84 | 3.8 | 96.2 | 0.0 | -0.14 | 0.74 | 0.78 | 5.37 | 2.2 | 0.004 | 0.62 | 0.0 | 0.04 | 17.57 | 0.00 | 1.954 | 12.28 | 2.29 | 3.9 | 96.1 | 0.0 | -0.02 | 0.88 | 0.74 | 0.80 | 5.31 | 37192 | 4576 | 40 | 0 | 16 | 904 | 0 | logfile |
✔ | 7R43 | 14261 | 2024-03-15 | 2022-02-08 | 2.4 | 2.41 | — | 2.5 | 0.007 | 0.79 | 0.0 | 0.84 | 16.09 | 0.00 | 1.899 | 3.40 | 0.01 | 2.5 | 97.4 | 0.0 | 0.39 | 0.69 | 0.89 | 5.73 | 2.4 | 0.007 | 1.30 | 0.0 | 0.25 | 16.43 | 0.00 | 2.127 | 4.42 | 0.90 | 1.7 | 98.2 | 0.0 | 1.61 | 0.31 | 0.69 | 0.90 | 4.92 | 68334 | 8188 | 109 | 0 | 47 | 885 | 0 | logfile |
✔ | 6YBQ | 10771 | 2024-03-22 | 2020-03-17 | 1.96 | 2.06 | — | 2.0 | 0.039 | 1.58 | 0.0 | 0.05 | 15.03 | 0.01 | 1.550 | 5.79 | 0.00 | 2.7 | 97.3 | 0.0 | -1.94 | 0.82 | 0.87 | 6.46 | 2.0 | 0.003 | 0.70 | 0.0 | 0.05 | 15.85 | 0.00 | 2.125 | 5.50 | 0.70 | 2.5 | 97.5 | 0.0 | 0.14 | 0.45 | 0.85 | 0.90 | 6.02 | 34092 | 4289 | 36 | 0 | 12 | 871 | 0 | logfile |
✔ | 8DQX | 27663 | 2024-03-24 | 2022-07-20 | 2.1 | 2.94 | 2.16 | 2.7 | 0.008 | 0.68 | 0.0 | 0.04 | 17.32 | 0.00 | 1.878 | 4.91 | 1.26 | 2.0 | 98.0 | 0.0 | 1.11 | 0.79 | 0.75 | 4.56 | 2.7 | 0.003 | 0.52 | 0.0 | 0.04 | 17.06 | 0.00 | 1.757 | 4.25 | 0.95 | 1.4 | 98.6 | 0.0 | 1.94 | 0.67 | 0.80 | 0.88 | 4.42 | 43173 | 2598 | 26 | 27 | 8 | 866 | 21143 | logfile |
✔ | 8PN8 | 17778 | 2024-03-22 | 2023-06-30 | 2.31 | 2.78 | 2.42 | 2.7 | 0.035 | 1.37 | 0.0 | 0.05 | 11.04 | 0.00 | 1.608 | 8.27 | 0.43 | 1.0 | 99.0 | 0.0 | 0.98 | 0.69 | 0.89 | 5.17 | 2.6 | 0.004 | 0.55 | 0.0 | 0.05 | 14.49 | 0.00 | 2.162 | 8.64 | 1.68 | 2.0 | 98.0 | 0.0 | 0.56 | 0.41 | 0.66 | 0.89 | 5.04 | 34298 | 4314 | 36 | 0 | 12 | 866 | 0 | logfile |
✘ | 8ENN | 28274 | 2024-03-17 | 2022-09-30 | 2.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16749 | 1974 | 12 | 0 | 9 | 858 | 0 | logfile |
✔ | 7B5K | 12035 | 2024-03-24 | 2020-12-03 | 2.9 | 2.60 | 2.95 | 2.8 | 0.006 | 0.90 | 0.0 | 0.05 | 22.65 | 0.02 | 1.504 | 11.12 | 0.45 | 3.9 | 95.9 | 0.1 | -3.45 | 0.76 | 0.80 | 3.32 | 2.8 | 0.005 | 0.72 | 0.0 | 0.05 | 22.64 | 0.01 | 1.408 | 6.52 | 3.81 | 4.6 | 95.4 | 0.0 | -0.49 | 0.42 | 0.78 | 0.83 | 2.83 | 148576 | 5684 | 80 | 4790 | 362 | 854 | 0 | logfile |
✔ | 7R4G | 14307 | 2024-03-12 | 2022-02-08 | 2.5 | 2.48 | — | 2.5 | 0.008 | 0.81 | 0.0 | 0.86 | 16.79 | 0.01 | 1.869 | 4.23 | 0.03 | 3.2 | 96.8 | 0.0 | -0.01 | 0.70 | 0.89 | 5.55 | 2.5 | 0.007 | 1.33 | 0.0 | 0.26 | 16.66 | 0.00 | 2.169 | 5.05 | 0.97 | 2.1 | 97.8 | 0.0 | 1.43 | 0.79 | 0.70 | 0.90 | 4.63 | 65153 | 7802 | 111 | 0 | 47 | 851 | 0 | logfile |
✔ | 3JCJ | 6559 | 2024-03-24 | 2015-12-18 | 3.7 | 3.96 | — | 3.8 | 0.007 | 1.05 | 18.0 | 0.10 | 21.23 | 0.01 | 1.344 | 2.06 | 0.39 | 9.2 | 89.0 | 1.8 | -3.55 | 0.80 | 0.75 | 1.31 | 3.8 | 0.004 | 0.68 | 0.0 | 0.03 | 22.74 | 0.01 | 1.800 | 17.17 | 4.50 | 11.2 | 87.9 | 0.9 | -2.26 | 1.99 | 0.82 | 0.84 | 1.24 | 148347 | 6249 | 82 | 4594 | 197 | 837 | 0 | logfile |