Table showing results for May 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7BoX	30135	2022-05-14	2020-03-20	3.8	3.29	—	3.8	0.012	1.46	5.0	0.07	12.93	0.01	2.236	9.53	0.05	8.1	91.5	0.5	-4.94	0.78	0.81	2.90	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18618	2334	12	0	0	0	0	logfile
✘	7AHQ	11790	2022-05-13	2020-09-25	3.6	4.20	3.44	3.7	0.011	1.08	0.0	0.07	14.40	0.01	1.179	8.04	0.00	2.5	97.5	0.0	-2.65	0.77	0.82	2.92	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15055	1855	10	0	20	0	0	logfile
✘	6VXK	21442	2022-05-14	2020-02-22	3.1	3.57	—	3.2	0.011	0.83	0.0	0.05	14.64	0.00	2.122	15.48	8.05	10.5	89.5	0.0	-3.69	0.86	0.88	3.00	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17418	2254	8	0	18	0	0	logfile
✘	7JMG	22393	2022-05-14	2020-07-31	4.5	7.15	—	4.3	0.005	0.93	0.0	0.05	9.82	0.01	1.373	7.47	0.27	10.3	89.6	0.1	-4.77	0.57	0.34	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	120756	13500	12	0	3608	0	0	logfile
✘	6YMY	10848	2022-05-13	2020-04-10	3.41	3.81	3.50	3.7	0.008	1.25	0.0	0.06	16.55	0.01	0.424	7.47	0.27	8.9	91.0	0.1	-6.00	0.68	0.82	2.78	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14612	1766	19	0	16	0	0	logfile
✘	7D99	30617	2022-05-13	2020-10-12	2.9	3.02	—	3.1	0.009	1.09	0.0	0.06	9.63	0.01	2.187	2.92	0.41	4.7	95.1	0.1	-5.36	0.71	0.85	3.24	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13800	1782	8	0	14	0	0	logfile
✘	6TU7	10590	2022-05-15	2020-01-03	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	logfile
✘	7CZY	30521	2022-05-16	2020-09-09	3.3	3.38	—	3.3	0.011	1.00	0.0	0.07	17.68	0.01	1.865	25.81	12.01	10.3	87.0	2.6	-3.80	0.62	0.70	1.78	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	31186	3880	33	0	76	0	0	logfile
✘	7CF9	30343	2022-05-14	2020-06-24	4.7	4.24	5.21	4.0	0.006	1.23	0.0	0.06	16.02	0.01	1.538	5.56	1.67	6.2	93.7	0.1	-4.86	0.79	0.68	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	116104	14416	12	0	1820	0	0	logfile
✘	7KY6	23069	2022-05-13	2020-12-07	3.1	3.28	—	3.2	0.006	0.68	0.0	0.04	17.68	0.00	2.092	12.88	7.34	6.9	92.9	0.2	-2.79	0.69	0.85	2.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10729	1322	7	0	10	0	0	logfile
✘	7ND4	12275	2022-05-16	2021-01-30	3.6	3.31	—	3.2	0.003	0.58	3.0	0.05	11.05	0.00	2.233	3.89	0.28	4.1	95.6	0.2	-0.12	0.74	0.79	2.91	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	29848	3729	30	0	71	0	0	logfile
✘	6TM2	10517	2022-05-12	2019-12-03	2.95	3.12	—	3.1	0.008	1.01	0.0	0.06	10.00	0.01	2.181	3.02	0.10	11.3	88.7	0.0	-4.14	0.44	0.47	3.61	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	55254	7230	60	0	54	138	0	logfile
✘	7ND8	12279	2022-05-15	2021-01-30	3.5	3.96	—	3.8	0.004	0.66	0.0	0.05	10.84	0.00	2.153	4.19	0.30	3.5	96.3	0.2	0.12	0.82	0.76	1.50	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	27659	3447	23	0	60	0	0	logfile
✘	6YXR	10995	2022-05-13	2020-05-03	3.4	3.53	3.43	3.5	0.019	2.23	2.0	0.13	19.52	0.02	1.197	27.04	0.44	4.1	95.7	0.3	-3.53	0.67	0.76	2.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	31910	2783	20	0	194	0	0	logfile
✘	6S6B	10102	2022-05-14	2019-07-02	2.75	3.35	3.07	3.2	0.005	0.76	0.0	0.05	14.62	0.00	1.961	19.12	0.15	15.3	84.3	0.4	-5.13	0.77	0.82	2.59	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	66914	8194	39	51	1	0	0	logfile
✘	7CFT	30347	2022-05-13	2020-06-28	3.9	4.07	—	4.0	0.009	0.98	0.0	0.06	15.17	0.01	2.276	6.04	1.75	7.4	92.6	0.0	-5.25	0.81	0.84	2.08	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11283	1425	9	0	6	0	0	logfile
✘	6SL5	10236	2022-05-18	2019-08-18	2.84	2.97	2.83	3.0	0.026	2.95	9.0	0.13	20.95	0.02	1.187	20.83	0.73	7.3	92.0	0.7	-3.12	0.71	0.77	2.42	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	43789	3744	36	0	292	0	0	logfile
✘	6WTi	21897	2022-05-13	2020-05-02	2.38	2.42	—	2.5	0.010	1.20	5.0	0.07	19.47	0.01	1.179	9.26	11.79	4.6	95.3	0.1	-3.48	0.60	0.74	1.70	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9980	1207	8	0	14	0	0	logfile
✘	6PLS	20374	2022-05-13	2019-07-01	3.0	3.13	—	3.1	0.008	1.03	0.0	0.06	8.94	0.01	1.523	4.94	0.00	2.6	97.4	0.0	-4.00	0.71	0.85	5.22	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14610	1720	15	0	75	0	0	logfile
✘	7ASD	11892	2022-05-16	2020-10-27	3.5	3.68	3.48	3.5	0.003	0.64	0.0	0.06	8.91	0.00	2.153	5.28	2.16	2.2	97.8	0.0	0.30	0.81	0.83	2.68	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	30296	3664	48	0	72	0	0	logfile

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