Table showing results for July 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7oJJ	12953	2022-07-04	2021-05-16	3.5	4.03	3.58	3.5	0.006	0.66	2.0	0.06	13.63	0.00	2.009	9.58	0.12	11.4	88.6	0.0	-3.69	0.92	0.87	2.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14330	1785	1	0	2	0	0	logfile
✘	7oJH	12951	2022-07-03	2021-05-15	3.1	2.57	4.80	20.0	0.011	0.90	0.0	0.05	11.01	0.00	2.239	2.98	0.52	2.9	97.1	0.0	0.37	0.00	0.00	-0.81	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8999	1138	4	0	5	0	0	logfile
✘	7AFA	11758	2022-07-04	2020-09-19	2.95	3.82	2.97	2.9	0.007	0.80	6.0	0.05	14.11	0.00	1.456	11.48	0.00	2.9	97.1	0.0	-1.10	0.86	0.88	1.92	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18482	1101	11	456	26	0	0	logfile
✘	6XLH	22244	2022-07-04	2020-06-28	2.83	2.93	—	2.9	0.001	0.39	0.0	0.04	7.54	0.00	2.093	5.99	0.13	1.5	98.5	0.0	-3.84	0.73	0.80	3.26	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13608	1675	6	0	6	0	0	logfile
✘	7AFL	11769	2022-07-06	2020-09-19	4.2	5.13	4.56	3.0	0.010	1.06	6.0	0.06	17.40	0.01	1.227	43.81	0.00	6.0	94.0	0.0	-1.84	0.89	0.87	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	34322	1487	15	1054	25	0	0	logfile
✘	7AFi	11766	2022-07-06	2020-09-19	3.53	4.65	3.55	2.4	0.010	0.95	8.0	0.06	16.63	0.00	1.216	33.84	0.00	9.0	91.0	0.0	-2.95	0.91	0.89	0.98	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	33803	1387	14	1066	46	0	0	logfile
✘	7E0J	30934	2022-07-03	2021-01-28	3.13	2.94	—	3.1	0.006	1.29	0.0	0.06	17.85	0.02	1.214	7.02	0.97	5.0	95.0	0.0	-2.78	0.59	0.82	2.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8140	672	6	0	56	0	0	logfile
✘	7AF5	11753	2022-07-04	2020-09-19	2.96	3.21	2.95	2.9	0.007	0.74	2.0	0.05	14.80	0.00	1.876	10.32	0.00	4.6	95.4	0.0	-1.98	0.85	0.87	2.87	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18531	1104	11	456	53	0	0	logfile
✘	7AF8	11756	2022-07-04	2020-09-19	2.75	3.17	2.81	2.9	0.004	0.63	4.0	0.04	13.58	0.00	2.002	6.56	0.00	3.6	96.4	0.0	-0.93	0.84	0.87	2.54	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18565	1109	11	456	52	0	0	logfile
✘	7AF3	11751	2022-07-04	2020-09-19	2.82	3.14	2.89	3.0	0.009	0.86	3.0	0.05	13.92	0.00	1.884	7.81	0.87	2.6	97.4	0.0	-0.44	0.82	0.88	2.69	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18580	1111	11	456	52	0	0	logfile
✘	7oP8	13014	2022-07-03	2021-05-31	3.5	3.85	—	3.8	0.004	0.86	0.0	0.05	14.44	0.01	1.950	6.41	0.00	5.6	94.4	0.0	-1.73	0.66	0.77	1.18	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8872	1118	1	0	2	0	0	logfile
✘	7NG8	12309	2022-07-04	2021-02-08	3.2	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20173	1341	4	0	0	0	9979	logfile
✘	7MiY	23868	2022-07-05	2021-04-18	3.1	3.21	—	3.2	0.004	0.82	1.0	0.06	15.73	0.00	1.216	9.82	1.31	4.9	95.0	0.2	-0.06	0.57	0.82	2.13	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21483	2598	10	0	28	0	0	logfile
✘	7MiX	23867	2022-07-05	2021-04-18	3.0	3.09	—	3.1	0.005	0.80	1.0	0.06	15.52	0.00	1.216	9.93	1.47	5.1	94.8	0.1	-0.62	0.59	0.81	2.86	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21652	2623	11	0	28	0	0	logfile
✘	7DZ7	30925	2022-07-04	2021-01-23	2.84	2.53	—	2.8	0.009	1.53	0.0	0.05	20.42	0.02	1.210	6.41	0.47	4.7	95.2	0.1	-2.58	0.67	0.77	3.69	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	69647	5998	55	0	471	0	0	logfile
✘	7E7o	31001	2022-07-04	2021-02-26	3.4	3.48	—	3.4	0.005	0.87	0.0	0.05	15.25	0.01	1.228	10.59	2.13	12.0	87.4	0.7	-3.57	0.70	0.84	2.63	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15816	2003	4	0	21	0	0	logfile
✘	7NYW	12656	2022-07-08	2021-03-23	3.1	3.76	3.13	3.2	0.003	0.49	0.0	0.04	18.03	0.00	1.229	6.13	0.00	3.7	96.3	0.0	1.43	0.83	0.79	1.86	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	48568	2795	18	104	6	0	23780	logfile
✘	7AFH	11765	2022-07-04	2020-09-19	3.59	4.69	6.66	2.8	0.009	0.89	2.0	0.05	16.69	0.01	1.752	32.84	0.00	7.5	92.5	0.0	-2.59	0.88	0.82	0.54	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18482	1103	11	456	12	0	0	logfile
✘	7NSo	12573	2022-07-07	2021-03-08	2.9	3.04	2.97	3.0	0.008	0.99	0.0	0.05	16.10	0.01	1.226	4.54	0.67	7.1	92.6	0.3	-3.62	0.81	0.83	2.59	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	144454	5691	56	4653	1	0	0	logfile
✘	7NSQ	12575	2022-07-08	2021-03-08	3.1	3.25	3.17	3.2	0.007	0.99	0.0	0.05	16.21	0.01	1.225	4.40	0.52	6.8	92.9	0.3	-3.65	0.82	0.85	2.43	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	146158	5690	57	4733	1	0	0	logfile

• ← previous
• Page 2 of 392
• next →