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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7oJJ | 12953 | 2022-07-04 | 2021-05-16 | 3.5 | 4.03 | 3.58 | 3.5 | 0.006 | 0.66 | 2.0 | 0.06 | 13.63 | 0.00 | 2.009 | 9.58 | 0.12 | 11.4 | 88.6 | 0.0 | -3.69 | 0.92 | 0.87 | 2.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14330 | 1785 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 7oJH | 12951 | 2022-07-03 | 2021-05-15 | 3.1 | 2.57 | 4.80 | 20.0 | 0.011 | 0.90 | 0.0 | 0.05 | 11.01 | 0.00 | 2.239 | 2.98 | 0.52 | 2.9 | 97.1 | 0.0 | 0.37 | 0.00 | 0.00 | -0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8999 | 1138 | 4 | 0 | 5 | 0 | 0 | logfile |
✘ | 7AFA | 11758 | 2022-07-04 | 2020-09-19 | 2.95 | 3.82 | 2.97 | 2.9 | 0.007 | 0.80 | 6.0 | 0.05 | 14.11 | 0.00 | 1.456 | 11.48 | 0.00 | 2.9 | 97.1 | 0.0 | -1.10 | 0.86 | 0.88 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18482 | 1101 | 11 | 456 | 26 | 0 | 0 | logfile |
✘ | 6XLH | 22244 | 2022-07-04 | 2020-06-28 | 2.83 | 2.93 | — | 2.9 | 0.001 | 0.39 | 0.0 | 0.04 | 7.54 | 0.00 | 2.093 | 5.99 | 0.13 | 1.5 | 98.5 | 0.0 | -3.84 | 0.73 | 0.80 | 3.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13608 | 1675 | 6 | 0 | 6 | 0 | 0 | logfile |
✘ | 7AFL | 11769 | 2022-07-06 | 2020-09-19 | 4.2 | 5.13 | 4.56 | 3.0 | 0.010 | 1.06 | 6.0 | 0.06 | 17.40 | 0.01 | 1.227 | 43.81 | 0.00 | 6.0 | 94.0 | 0.0 | -1.84 | 0.89 | 0.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34322 | 1487 | 15 | 1054 | 25 | 0 | 0 | logfile |
✘ | 7AFi | 11766 | 2022-07-06 | 2020-09-19 | 3.53 | 4.65 | 3.55 | 2.4 | 0.010 | 0.95 | 8.0 | 0.06 | 16.63 | 0.00 | 1.216 | 33.84 | 0.00 | 9.0 | 91.0 | 0.0 | -2.95 | 0.91 | 0.89 | 0.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33803 | 1387 | 14 | 1066 | 46 | 0 | 0 | logfile |
✘ | 7E0J | 30934 | 2022-07-03 | 2021-01-28 | 3.13 | 2.94 | — | 3.1 | 0.006 | 1.29 | 0.0 | 0.06 | 17.85 | 0.02 | 1.214 | 7.02 | 0.97 | 5.0 | 95.0 | 0.0 | -2.78 | 0.59 | 0.82 | 2.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8140 | 672 | 6 | 0 | 56 | 0 | 0 | logfile |
✘ | 7AF5 | 11753 | 2022-07-04 | 2020-09-19 | 2.96 | 3.21 | 2.95 | 2.9 | 0.007 | 0.74 | 2.0 | 0.05 | 14.80 | 0.00 | 1.876 | 10.32 | 0.00 | 4.6 | 95.4 | 0.0 | -1.98 | 0.85 | 0.87 | 2.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18531 | 1104 | 11 | 456 | 53 | 0 | 0 | logfile |
✘ | 7AF8 | 11756 | 2022-07-04 | 2020-09-19 | 2.75 | 3.17 | 2.81 | 2.9 | 0.004 | 0.63 | 4.0 | 0.04 | 13.58 | 0.00 | 2.002 | 6.56 | 0.00 | 3.6 | 96.4 | 0.0 | -0.93 | 0.84 | 0.87 | 2.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18565 | 1109 | 11 | 456 | 52 | 0 | 0 | logfile |
✘ | 7AF3 | 11751 | 2022-07-04 | 2020-09-19 | 2.82 | 3.14 | 2.89 | 3.0 | 0.009 | 0.86 | 3.0 | 0.05 | 13.92 | 0.00 | 1.884 | 7.81 | 0.87 | 2.6 | 97.4 | 0.0 | -0.44 | 0.82 | 0.88 | 2.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18580 | 1111 | 11 | 456 | 52 | 0 | 0 | logfile |
✘ | 7oP8 | 13014 | 2022-07-03 | 2021-05-31 | 3.5 | 3.85 | — | 3.8 | 0.004 | 0.86 | 0.0 | 0.05 | 14.44 | 0.01 | 1.950 | 6.41 | 0.00 | 5.6 | 94.4 | 0.0 | -1.73 | 0.66 | 0.77 | 1.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8872 | 1118 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 7NG8 | 12309 | 2022-07-04 | 2021-02-08 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20173 | 1341 | 4 | 0 | 0 | 0 | 9979 | logfile |
✘ | 7MiY | 23868 | 2022-07-05 | 2021-04-18 | 3.1 | 3.21 | — | 3.2 | 0.004 | 0.82 | 1.0 | 0.06 | 15.73 | 0.00 | 1.216 | 9.82 | 1.31 | 4.9 | 95.0 | 0.2 | -0.06 | 0.57 | 0.82 | 2.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21483 | 2598 | 10 | 0 | 28 | 0 | 0 | logfile |
✘ | 7MiX | 23867 | 2022-07-05 | 2021-04-18 | 3.0 | 3.09 | — | 3.1 | 0.005 | 0.80 | 1.0 | 0.06 | 15.52 | 0.00 | 1.216 | 9.93 | 1.47 | 5.1 | 94.8 | 0.1 | -0.62 | 0.59 | 0.81 | 2.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21652 | 2623 | 11 | 0 | 28 | 0 | 0 | logfile |
✘ | 7DZ7 | 30925 | 2022-07-04 | 2021-01-23 | 2.84 | 2.53 | — | 2.8 | 0.009 | 1.53 | 0.0 | 0.05 | 20.42 | 0.02 | 1.210 | 6.41 | 0.47 | 4.7 | 95.2 | 0.1 | -2.58 | 0.67 | 0.77 | 3.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69647 | 5998 | 55 | 0 | 471 | 0 | 0 | logfile |
✘ | 7E7o | 31001 | 2022-07-04 | 2021-02-26 | 3.4 | 3.48 | — | 3.4 | 0.005 | 0.87 | 0.0 | 0.05 | 15.25 | 0.01 | 1.228 | 10.59 | 2.13 | 12.0 | 87.4 | 0.7 | -3.57 | 0.70 | 0.84 | 2.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15816 | 2003 | 4 | 0 | 21 | 0 | 0 | logfile |
✘ | 7NYW | 12656 | 2022-07-08 | 2021-03-23 | 3.1 | 3.76 | 3.13 | 3.2 | 0.003 | 0.49 | 0.0 | 0.04 | 18.03 | 0.00 | 1.229 | 6.13 | 0.00 | 3.7 | 96.3 | 0.0 | 1.43 | 0.83 | 0.79 | 1.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 48568 | 2795 | 18 | 104 | 6 | 0 | 23780 | logfile |
✘ | 7AFH | 11765 | 2022-07-04 | 2020-09-19 | 3.59 | 4.69 | 6.66 | 2.8 | 0.009 | 0.89 | 2.0 | 0.05 | 16.69 | 0.01 | 1.752 | 32.84 | 0.00 | 7.5 | 92.5 | 0.0 | -2.59 | 0.88 | 0.82 | 0.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18482 | 1103 | 11 | 456 | 12 | 0 | 0 | logfile |
✘ | 7NSo | 12573 | 2022-07-07 | 2021-03-08 | 2.9 | 3.04 | 2.97 | 3.0 | 0.008 | 0.99 | 0.0 | 0.05 | 16.10 | 0.01 | 1.226 | 4.54 | 0.67 | 7.1 | 92.6 | 0.3 | -3.62 | 0.81 | 0.83 | 2.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 144454 | 5691 | 56 | 4653 | 1 | 0 | 0 | logfile |
✘ | 7NSQ | 12575 | 2022-07-08 | 2021-03-08 | 3.1 | 3.25 | 3.17 | 3.2 | 0.007 | 0.99 | 0.0 | 0.05 | 16.21 | 0.01 | 1.225 | 4.40 | 0.52 | 6.8 | 92.9 | 0.3 | -3.65 | 0.82 | 0.85 | 2.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 146158 | 5690 | 57 | 4733 | 1 | 0 | 0 | logfile |