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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6KS7 | 0759 | 2022-04-05 | 2019-08-23 | 4.62 | 4.57 | — | 4.5 | 0.001 | 0.39 | 0.0 | 0.04 | 7.11 | 0.00 | 2.241 | 5.72 | 0.00 | 4.3 | 95.7 | 0.0 | -3.50 | 0.70 | 0.62 | — | 4.5 | 0.009 | 0.91 | 0.0 | 0.05 | 12.10 | 0.00 | 1.014 | 21.86 | 0.03 | 3.5 | 96.4 | 0.1 | -0.25 | 1.82 | 0.74 | 0.68 | — | 62022 | 8131 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NEQ | 9358 | 2022-04-05 | 2018-12-18 | 3.32 | 3.85 | — | 3.5 | 0.001 | 0.37 | 0.0 | 0.03 | 12.81 | 0.00 | 1.949 | 3.27 | 0.35 | 10.3 | 88.1 | 1.6 | -2.42 | 0.69 | 0.51 | 0.07 | 3.5 | 0.004 | 0.68 | 0.0 | 0.04 | 16.24 | 0.01 | 2.099 | 13.00 | 0.35 | 5.3 | 94.6 | 0.1 | -0.32 | 1.93 | 0.84 | 0.84 | 1.44 | 65776 | 5509 | 32 | 952 | 147 | 0 | 0 | logfile |
✔ | 6KRE | 0757 | 2022-04-05 | 2019-08-21 | 4.45 | 4.34 | — | 4.4 | 0.001 | 0.39 | 0.0 | 0.04 | 7.11 | 0.00 | 2.244 | 6.04 | 0.03 | 4.1 | 95.8 | 0.1 | -3.50 | 0.61 | 0.56 | — | 4.4 | 0.004 | 0.75 | 1.0 | 0.04 | 12.02 | 0.00 | 2.101 | 12.63 | 0.05 | 3.2 | 96.8 | 0.1 | 0.24 | 1.77 | 0.65 | 0.62 | — | 60321 | 7922 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 5GW4 | 9540 | 2022-04-05 | 2016-09-08 | 4.7 | 4.89 | — | 4.8 | 0.001 | 0.42 | 0.0 | 0.04 | 7.26 | 0.00 | 2.187 | 6.49 | 0.00 | 4.3 | 95.6 | 0.1 | -3.58 | 0.77 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MWQ | 9277 | 2022-04-06 | 2018-10-30 | 3.0 | 3.33 | 2.89 | 3.1 | 0.001 | 0.36 | 0.0 | 0.04 | 4.66 | 0.00 | 2.321 | 4.19 | 0.13 | 11.0 | 87.5 | 1.5 | -4.81 | 0.54 | 0.39 | 0.22 | 3.1 | 0.004 | 0.75 | 0.0 | 0.04 | 13.37 | 0.00 | 2.114 | 9.31 | 2.04 | 4.9 | 94.9 | 0.2 | -1.32 | 1.34 | 0.78 | 0.86 | 1.93 | 22072 | 2873 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 5N6W | 3595 | 2022-04-09 | 2017-02-16 | 4.2 | 4.31 | — | 4.2 | 0.001 | 0.36 | 0.0 | 0.04 | 4.92 | 0.00 | 2.309 | 3.73 | 0.00 | 17.7 | 79.7 | 2.6 | -5.61 | 0.44 | 0.27 | — | 4.2 | 0.021 | 1.61 | 1.0 | 0.04 | 10.59 | 0.01 | 1.586 | 23.47 | 0.04 | 11.8 | 87.5 | 0.6 | -4.11 | 1.47 | 0.68 | 0.64 | — | 40752 | 2512 | 16 | 0 | 0 | 0 | 20032 | logfile |
✔ | 7TBH | 25799 | 2022-04-09 | 2021-12-22 | 2.3 | 3.49 | — | 2.8 | 0.001 | 0.43 | 0.0 | 0.03 | 8.12 | 0.00 | 2.141 | 6.17 | 0.43 | 7.8 | 91.4 | 0.8 | 0.80 | 0.78 | 0.76 | 0.52 | 2.8 | 0.003 | 0.64 | 0.0 | 0.04 | 13.85 | 0.01 | 2.127 | 7.87 | 0.39 | 2.0 | 97.6 | 0.4 | 2.81 | 0.94 | 0.81 | 0.87 | 2.74 | 51768 | 6288 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KRD | 0756 | 2022-04-05 | 2019-08-21 | 4.38 | 4.25 | — | 4.4 | 0.001 | 0.39 | 0.0 | 0.04 | 7.15 | 0.00 | 2.226 | 5.80 | 0.00 | 4.5 | 95.5 | 0.1 | -3.58 | 0.57 | 0.52 | — | 4.3 | 0.008 | 0.86 | 1.0 | 0.05 | 11.99 | 0.00 | 1.822 | 15.45 | 0.01 | 3.3 | 96.6 | 0.1 | -0.02 | 1.78 | 0.63 | 0.59 | — | 61005 | 8006 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6K9L | 9950 | 2022-04-07 | 2019-06-16 | 4.27 | 4.50 | — | 4.2 | 0.001 | 0.49 | 0.0 | 0.04 | 9.31 | 0.00 | 2.240 | 4.75 | 4.95 | 4.6 | 95.4 | 0.0 | -3.11 | 0.84 | 0.71 | — | 4.2 | 0.003 | 0.70 | 0.0 | 0.04 | 9.93 | 0.00 | 2.093 | 13.21 | 0.00 | 8.3 | 91.7 | 0.0 | 0.47 | 1.81 | 0.85 | 0.75 | — | 30601 | 5103 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KS8 | 0760 | 2022-04-05 | 2019-08-23 | 4.69 | 4.76 | — | 4.6 | 0.001 | 0.39 | 0.0 | 0.04 | 7.12 | 0.00 | 2.228 | 5.85 | 0.01 | 4.4 | 95.5 | 0.0 | -3.61 | 0.77 | 0.67 | — | 4.6 | 0.003 | 0.69 | 0.0 | 0.04 | 11.61 | 0.00 | 2.100 | 15.56 | 0.01 | 3.0 | 97.0 | 0.0 | -0.13 | 1.85 | 0.80 | 0.71 | — | 61943 | 8120 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6D00 | 7782 | 2022-04-08 | 2018-04-09 | 4.0 | 3.65 | — | 3.0 | 0.001 | 0.45 | 0.0 | 0.04 | 9.42 | 0.00 | 2.284 | 3.91 | 0.05 | 6.5 | 92.8 | 0.7 | -4.95 | 0.62 | 0.43 | — | 3.4 | 0.004 | 0.85 | 0.0 | 0.04 | 15.19 | 0.01 | 2.117 | 14.55 | 0.39 | 3.2 | 96.7 | 0.0 | -0.43 | 1.59 | 0.83 | 0.68 | — | 38328 | 4824 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 5oAF | 3773 | 2022-04-06 | 2017-06-21 | 4.06 | 4.15 | — | 4.1 | 0.001 | 0.47 | 0.0 | 0.04 | 9.13 | 0.00 | 2.165 | 12.38 | 0.28 | 2.4 | 97.6 | 0.0 | -2.75 | 0.69 | 0.67 | — | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 12.90 | 0.00 | 2.107 | 13.73 | 0.00 | 4.1 | 95.8 | 0.0 | -0.36 | 3.56 | 0.72 | 0.72 | — | 19748 | 2538 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 5ZBo | 6746 | 2022-04-08 | 2018-02-12 | 4.12 | 4.69 | — | 4.8 | 0.001 | 0.38 | 0.0 | 0.04 | 15.92 | 0.00 | 2.148 | 1.93 | 0.49 | 11.1 | 86.2 | 2.7 | -4.88 | 0.71 | 0.60 | — | 4.1 | 0.003 | 0.77 | 1.0 | 0.04 | 13.18 | 0.00 | 2.045 | 19.38 | 0.00 | 5.9 | 94.1 | 0.0 | -2.25 | 2.94 | 0.74 | 0.79 | — | 89100 | 10860 | 60 | 0 | 0 | 0 | 0 | logfile |
✘ | 7FiJ | 31599 | 2022-04-04 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SAM | 24952 | 2022-04-04 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 13.28 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.006 | 0.88 | 0.0 | 0.04 | 22.86 | 0.01 | 1.817 | 83.53 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.89 | 0.95 | 0.86 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 7T4M | 25680 | 2022-04-09 | 2021-12-10 | 2.48 | 2.77 | 2.55 | 2.7 | 0.001 | 0.38 | 0.0 | 0.04 | 9.69 | 0.00 | 2.253 | 4.85 | 0.97 | 1.6 | 98.4 | 0.0 | 1.34 | 0.72 | 0.86 | 4.48 | 2.7 | 0.003 | 0.50 | 0.0 | 0.04 | 12.95 | 0.00 | 2.169 | 5.68 | 0.69 | 1.4 | 98.6 | 0.0 | 1.55 | 0.90 | 0.73 | 0.88 | 3.98 | 39054 | 4854 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2022-04-05 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 11.90 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.01 | 0.0 | 0.05 | 23.66 | 0.01 | 1.957 | 72.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.26 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2022-04-06 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.31 | 0.0 | 0.02 | 11.56 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.004 | 0.76 | 0.0 | 0.04 | 17.15 | 0.01 | 1.994 | 28.48 | 0.45 | 18.5 | 80.5 | 1.1 | -4.42 | 1.71 | 0.79 | 0.64 | 0.68 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 6HD5 | 0201 | 2022-04-04 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.003 | 0.73 | 0.0 | 0.04 | 11.96 | 0.00 | 2.138 | 15.18 | 0.00 | 5.4 | 94.5 | 0.1 | -0.09 | 2.01 | 0.45 | 0.55 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NF8 | 9362 | 2022-04-05 | 2018-12-19 | 3.48 | 3.99 | — | 3.6 | 0.001 | 0.39 | 0.0 | 0.03 | 12.76 | 0.00 | 1.916 | 3.05 | 0.58 | 10.4 | 88.3 | 1.3 | -2.53 | 0.76 | 0.60 | 1.16 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.68 | 0.00 | 2.019 | 12.72 | 0.19 | 5.5 | 94.5 | 0.0 | -0.34 | 2.59 | 0.84 | 0.79 | 1.23 | 65776 | 5509 | 32 | 952 | 147 | 0 | 0 | logfile |