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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SoA | 25264 | 2023-04-20 | 2021-10-29 | 3.1 | 3.33 | 3.14 | 3.3 | 0.011 | 1.27 | 0.0 | 0.08 | 10.31 | 0.01 | 2.194 | 1.06 | 0.24 | 2.0 | 98.0 | 0.0 | 0.99 | 0.68 | 0.84 | 4.69 | 3.3 | 0.003 | 0.59 | 0.0 | 0.05 | 13.40 | 0.00 | 2.241 | 3.98 | 0.24 | 2.6 | 97.4 | 0.0 | 0.93 | 0.56 | 0.66 | 0.90 | 4.81 | 3850 | 477 | 5 | 0 | 6 | 0 | 0 | logfile |
✔ | 8GWo | 34318 | 2023-04-26 | 2022-09-17 | 3.8 | 4.21 | 3.91 | 4.0 | 0.008 | 0.82 | 0.0 | 0.05 | 15.18 | 0.01 | 1.755 | 15.73 | 0.66 | 8.8 | 91.1 | 0.1 | -2.55 | 0.81 | 0.82 | 1.08 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 15.57 | 0.00 | 2.121 | 12.36 | 0.35 | 7.3 | 92.7 | 0.0 | -1.67 | 0.50 | 0.82 | 0.82 | 0.97 | 21880 | 2655 | 12 | 53 | 9 | 0 | 0 | logfile |
✔ | 7P9B | 13261 | 2023-04-21 | 2021-07-26 | 2.45 | 2.64 | 2.53 | 2.6 | 0.008 | 0.76 | 0.0 | 0.05 | 10.07 | 0.01 | 1.733 | 7.36 | 0.93 | 2.5 | 97.5 | 0.0 | -1.21 | 0.79 | 0.88 | 6.15 | 2.6 | 0.003 | 0.51 | 0.0 | 0.04 | 14.40 | 0.00 | 2.117 | 5.69 | 0.85 | 2.1 | 97.9 | 0.0 | 1.11 | 0.43 | 0.81 | 0.91 | 5.21 | 60290 | 7550 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WS3 | 32742 | 2023-04-29 | 2022-01-28 | 3.6 | 4.00 | — | 3.8 | 0.004 | 0.65 | 0.0 | 0.05 | 13.11 | 0.00 | 2.202 | 7.83 | 0.03 | 3.2 | 96.8 | 0.0 | -0.92 | 0.80 | 0.76 | 2.72 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 15.09 | 0.00 | 2.104 | 8.43 | 0.37 | 3.8 | 96.2 | 0.0 | -0.48 | 1.30 | 0.83 | 0.83 | 2.31 | 30215 | 3811 | 27 | 0 | 54 | 0 | 0 | logfile |
✔ | 6QC7 | 4499 | 2023-04-23 | 2018-12-27 | 4.4 | 4.45 | 4.37 | 4.4 | 0.007 | 1.20 | 0.0 | 1.03 | 11.60 | 0.01 | 2.126 | 7.14 | 0.47 | 12.3 | 87.6 | 0.1 | -4.14 | 0.62 | 0.75 | — | 4.4 | 0.009 | 1.72 | 0.0 | 0.31 | 13.71 | 0.01 | 2.045 | 19.68 | 0.03 | 11.0 | 89.0 | 0.0 | -1.51 | 3.00 | 0.63 | 0.77 | — | 65353 | 8086 | 57 | 0 | 18 | 0 | 0 | logfile |
✔ | 7JJo | 22357 | 2023-04-23 | 2020-07-27 | 2.6 | 2.72 | — | 2.6 | 0.003 | 0.48 | 0.0 | 0.04 | 14.21 | 0.00 | 2.102 | 3.07 | 1.78 | 2.0 | 98.0 | 0.0 | -1.12 | 0.55 | 0.83 | 3.47 | 2.6 | 0.003 | 0.50 | 0.0 | 0.04 | 16.63 | 0.00 | 2.069 | 3.77 | 1.90 | 1.5 | 98.5 | 0.0 | 1.44 | 0.84 | 0.58 | 0.86 | 3.24 | 15641 | 1002 | 5 | 0 | 1 | 0 | 7749 | logfile |
✔ | 7F93 | 31496 | 2023-04-25 | 2021-07-03 | 3.6 | 3.95 | — | 4.0 | 0.007 | 1.26 | 0.0 | 0.05 | 16.99 | 0.01 | 2.293 | 3.35 | 4.00 | 2.8 | 97.2 | 0.0 | -5.48 | 0.56 | 0.84 | 2.93 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 15.73 | 0.00 | 2.181 | 7.76 | 0.29 | 1.5 | 98.5 | 0.0 | 1.19 | 0.79 | 0.56 | 0.83 | 2.71 | 20808 | 2352 | 24 | 0 | 120 | 0 | 0 | logfile |
✔ | 7XRP | 33416 | 2023-04-20 | 2022-05-11 | 3.88 | 4.07 | 3.83 | 4.0 | 0.008 | 1.14 | 0.0 | 0.08 | 14.63 | 0.02 | 2.261 | 4.57 | 0.45 | 8.4 | 91.6 | 0.0 | -4.63 | 0.53 | 0.80 | 2.30 | 4.0 | 0.004 | 0.72 | 0.0 | 0.04 | 16.41 | 0.00 | 2.196 | 13.96 | 0.68 | 5.8 | 94.2 | 0.0 | -3.10 | 0.68 | 0.53 | 0.80 | 1.97 | 4129 | 515 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7WS0 | 32739 | 2023-04-29 | 2022-01-28 | 3.2 | 3.66 | — | 3.5 | 0.004 | 0.62 | 0.0 | 0.05 | 13.22 | 0.00 | 2.225 | 5.96 | 0.00 | 3.1 | 96.9 | 0.0 | -0.91 | 0.80 | 0.80 | 2.70 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 14.94 | 0.00 | 2.145 | 7.12 | 0.12 | 3.7 | 96.3 | 0.0 | -0.39 | 0.56 | 0.78 | 0.85 | 2.61 | 30440 | 3817 | 30 | 0 | 66 | 0 | 0 | logfile |
✔ | 7P05 | 13144 | 2023-04-25 | 2021-06-29 | 3.13 | 3.16 | — | 3.3 | 0.008 | 0.87 | 0.0 | 0.04 | 13.66 | 0.01 | 1.997 | 7.44 | 0.09 | 4.1 | 95.9 | 0.0 | 0.57 | 0.66 | 0.82 | 3.58 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 14.62 | 0.00 | 1.976 | 5.82 | 0.00 | 4.0 | 96.0 | 0.0 | 1.12 | 0.78 | 0.67 | 0.84 | 3.24 | 21576 | 1353 | 1 | 0 | 3 | 0 | 10675 | logfile |
✔ | 7TZ6 | 26203 | 2023-04-22 | 2022-02-15 | 2.88 | 3.27 | — | 3.2 | 0.005 | 0.77 | 0.0 | 0.04 | 12.10 | 0.01 | 2.038 | 1.51 | 0.26 | 2.6 | 97.3 | 0.0 | 0.43 | 0.65 | 0.83 | 3.78 | 3.2 | 0.004 | 0.59 | 0.0 | 0.04 | 15.55 | 0.00 | 1.871 | 4.27 | 1.44 | 3.0 | 97.0 | 0.0 | 1.48 | 0.72 | 0.67 | 0.86 | 3.24 | 64906 | 4126 | 28 | 0 | 10 | 0 | 32164 | logfile |
✔ | 7ZGY | 14715 | 2023-04-26 | 2022-04-04 | 2.54 | 3.09 | 5.67 | 3.1 | 0.025 | 0.90 | 0.0 | 0.27 | 14.44 | 0.01 | 1.605 | 24.14 | 0.00 | 10.2 | 89.5 | 0.2 | -1.88 | 0.69 | 0.83 | 4.57 | 3.1 | 0.004 | 0.88 | 0.0 | 0.05 | 15.60 | 0.00 | 1.899 | 12.83 | 0.60 | 10.2 | 89.7 | 0.2 | -1.80 | 0.23 | 0.68 | 0.87 | 4.49 | 21861 | 2847 | 6 | 0 | 21 | 0 | 0 | logfile |
✔ | 6QC5 | 4497 | 2023-04-23 | 2018-12-26 | 4.3 | 4.44 | 4.37 | 4.3 | 0.009 | 1.29 | 0.0 | 1.03 | 11.80 | 0.01 | 2.162 | 8.03 | 0.72 | 12.3 | 87.5 | 0.2 | -4.12 | 0.64 | 0.77 | — | 4.3 | 0.009 | 1.72 | 0.0 | 0.31 | 13.58 | 0.01 | 1.296 | 20.13 | 0.01 | 10.9 | 89.1 | 0.0 | -1.54 | 1.04 | 0.65 | 0.78 | — | 65691 | 8136 | 57 | 0 | 16 | 0 | 0 | logfile |
✔ | 6QC6 | 4498 | 2023-04-23 | 2018-12-27 | 4.1 | 4.24 | 4.40 | 4.2 | 0.006 | 1.19 | 0.0 | 1.03 | 11.45 | 0.01 | 2.082 | 6.24 | 0.55 | 10.3 | 89.6 | 0.1 | -4.07 | 0.65 | 0.77 | — | 4.1 | 0.009 | 1.72 | 0.0 | 0.31 | 13.57 | 0.01 | 2.048 | 17.91 | 0.03 | 10.2 | 89.8 | 0.0 | -1.43 | 1.06 | 0.66 | 0.79 | — | 65344 | 8085 | 58 | 0 | 18 | 0 | 0 | logfile |
✔ | 7WWi | 32866 | 2023-04-29 | 2022-02-13 | 3.5 | 4.12 | — | 3.8 | 0.003 | 0.60 | 0.0 | 0.05 | 13.13 | 0.00 | 2.107 | 7.68 | 0.00 | 2.9 | 97.1 | 0.0 | 0.14 | 0.84 | 0.86 | 2.48 | 3.8 | 0.004 | 0.61 | 0.0 | 0.04 | 14.73 | 0.00 | 2.156 | 9.47 | 0.30 | 4.2 | 95.8 | 0.0 | 0.09 | 0.40 | 0.84 | 0.87 | 2.48 | 30237 | 3791 | 26 | 0 | 43 | 0 | 0 | logfile |
✔ | 7WAH | 32385 | 2023-04-22 | 2021-12-14 | 2.45 | 2.65 | — | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 11.56 | 0.00 | 2.239 | 7.07 | 0.55 | 1.7 | 98.3 | 0.0 | 0.28 | 0.64 | 0.80 | 3.72 | 2.8 | 0.002 | 0.53 | 0.0 | 0.04 | 15.46 | 0.00 | 2.081 | 7.50 | 2.11 | 2.3 | 97.7 | 0.0 | 0.63 | 1.00 | 0.63 | 0.80 | 3.25 | 13217 | 1473 | 3 | 62 | 4 | 0 | 0 | logfile |
✔ | 7WS5 | 32744 | 2023-04-29 | 2022-01-28 | 3.7 | 4.15 | — | 3.9 | 0.003 | 0.61 | 0.0 | 0.05 | 13.21 | 0.00 | 2.168 | 9.14 | 0.09 | 2.5 | 97.5 | 0.1 | -0.07 | 0.83 | 0.84 | 1.95 | 3.8 | 0.004 | 0.61 | 0.0 | 0.04 | 14.76 | 0.00 | 2.116 | 11.11 | 0.12 | 4.2 | 95.8 | 0.0 | -0.08 | 1.28 | 0.84 | 0.86 | 2.11 | 30228 | 3800 | 26 | 0 | 38 | 0 | 0 | logfile |
✔ | 8FM9 | 29289 | 2023-04-28 | 2022-12-22 | 3.2 | 3.48 | 3.49 | 3.6 | 0.002 | 0.45 | 0.0 | 0.04 | 11.34 | 0.00 | 1.810 | 6.85 | 0.00 | 2.7 | 97.3 | 0.0 | 0.35 | 0.46 | 0.71 | 2.23 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 13.56 | 0.00 | 1.971 | 7.01 | 0.29 | 4.3 | 95.6 | 0.2 | 1.29 | 1.47 | 0.48 | 0.78 | 2.50 | 76764 | 7692 | 24 | 0 | 0 | 0 | 29916 | logfile |
✔ | 7JRJ | 22446 | 2023-04-26 | 2020-08-12 | 3.03 | 2.86 | — | 2.8 | 0.006 | 0.60 | 0.0 | 0.04 | 11.33 | 0.00 | 2.210 | 5.16 | 0.04 | 4.6 | 95.4 | 0.0 | -2.44 | 0.75 | 0.81 | 3.28 | 2.6 | 0.005 | 0.62 | 0.0 | 0.04 | 14.01 | 0.00 | 2.121 | 5.98 | 0.13 | 3.8 | 96.2 | 0.0 | 0.36 | 0.61 | 0.77 | 0.84 | 2.83 | 22924 | 2931 | 15 | 0 | 128 | 0 | 0 | logfile |
✔ | 7WS4 | 32743 | 2023-04-27 | 2022-01-28 | 3.7 | 4.11 | — | 3.9 | 0.004 | 0.62 | 0.0 | 0.05 | 13.41 | 0.00 | 2.110 | 9.30 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.83 | 0.85 | 2.54 | 3.9 | 0.007 | 0.69 | 0.0 | 0.05 | 14.93 | 0.00 | 2.105 | 10.56 | 0.31 | 4.4 | 95.6 | 0.0 | -0.12 | 0.34 | 0.84 | 0.87 | 2.50 | 26566 | 3327 | 22 | 0 | 38 | 0 | 0 | logfile |