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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6QMB | 4594 | 2024-03-15 | 2019-02-01 | 3.6 | 3.74 | 3.74 | 3.7 | 0.008 | 0.87 | 0.0 | 0.05 | 14.68 | 0.01 | 2.284 | 3.90 | 0.00 | 3.6 | 96.4 | 0.0 | -3.44 | 0.75 | 0.84 | 2.36 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 16.33 | 0.00 | 2.183 | 8.32 | 1.67 | 3.4 | 96.6 | 0.0 | 1.41 | 1.15 | 0.75 | 0.83 | 1.20 | 10698 | 1322 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7WYU | 32894 | 2024-03-19 | 2022-02-16 | 3.4 | 3.42 | — | 3.4 | 0.011 | 1.30 | 0.0 | 0.06 | 20.27 | 0.01 | 1.911 | 9.36 | 10.48 | 7.5 | 92.1 | 0.3 | -3.01 | 0.74 | 0.82 | 1.83 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.37 | 0.00 | 1.909 | 6.07 | 2.12 | 2.3 | 97.7 | 0.0 | 0.45 | 1.31 | 0.77 | 0.88 | 2.18 | 22662 | 2654 | 22 | 0 | 78 | 4 | 0 | logfile |
✔ | 3J94 | 6204 | 2024-03-18 | 2014-12-05 | 4.2 | 2.69 | — | 3.1 | 0.009 | 1.97 | 0.0 | 0.07 | 17.14 | 0.01 | 1.261 | 31.36 | 5.87 | 5.0 | 93.0 | 2.0 | 2.31 | 0.83 | 0.77 | — | 2.7 | 0.003 | 0.77 | 0.0 | 0.04 | 14.74 | 0.00 | 1.688 | 15.69 | 0.05 | 4.6 | 94.9 | 0.5 | 0.58 | 2.62 | 0.85 | 0.80 | — | 21509 | 2895 | 12 | 0 | 11 | 0 | 0 | logfile |
✔ | 6VX3 | 21428 | 2024-03-11 | 2020-02-21 | 3.7 | 3.91 | — | 3.9 | 0.009 | 1.11 | 0.0 | 0.05 | 19.67 | 0.00 | 1.829 | 25.97 | 4.02 | 7.4 | 92.6 | 0.0 | -4.21 | 0.60 | 0.81 | 2.86 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 18.71 | 0.00 | 2.231 | 9.63 | 6.53 | 3.7 | 96.3 | 0.0 | -1.70 | 1.26 | 0.59 | 0.80 | 2.12 | 7780 | 900 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6oYA | 20223 | 2024-03-11 | 2019-05-14 | 3.3 | 3.88 | — | 3.7 | 0.004 | 0.88 | 0.0 | 0.05 | 15.28 | 0.01 | 2.329 | 5.70 | 0.11 | 6.9 | 93.1 | 0.0 | -4.69 | 0.64 | 0.79 | 2.13 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 16.48 | 0.00 | 2.084 | 12.67 | 3.65 | 5.9 | 94.1 | 0.0 | -1.36 | 0.51 | 0.63 | 0.79 | 1.44 | 8321 | 1056 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6V9Y | 21130 | 2024-03-17 | 2019-12-16 | 3.6 | 4.03 | 3.78 | 3.9 | 0.009 | 1.18 | 0.0 | 0.06 | 14.21 | 0.01 | 2.262 | 6.50 | 2.13 | 5.6 | 94.4 | 0.0 | -5.18 | 0.74 | 0.82 | 1.38 | 3.9 | 0.003 | 0.79 | 0.0 | 0.04 | 16.33 | 0.00 | 2.111 | 13.87 | 3.73 | 4.8 | 95.2 | 0.0 | 0.18 | 0.72 | 0.72 | 0.81 | 1.28 | 17716 | 2248 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HRB | 0258 | 2024-03-15 | 2018-09-26 | 4.0 | 4.20 | 3.96 | 4.0 | 0.008 | 0.96 | 0.0 | 0.05 | 9.28 | 0.01 | 2.186 | 6.75 | 0.26 | 7.2 | 92.8 | 0.0 | -4.97 | 0.74 | 0.84 | — | 4.0 | 0.004 | 0.72 | 0.0 | 0.04 | 13.40 | 0.00 | 2.020 | 14.14 | 1.68 | 4.2 | 95.8 | 0.0 | 0.01 | 1.27 | 0.74 | 0.85 | — | 10787 | 1447 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8iTF | 35705 | 2024-03-14 | 2023-03-22 | 3.46 | 2.33 | 3.36 | 2.1 | 0.005 | 0.64 | 0.0 | 0.05 | 14.17 | 0.00 | 2.250 | 5.05 | 0.95 | 3.4 | 96.6 | 0.0 | -0.32 | 0.77 | 0.78 | 2.35 | 2.2 | 0.004 | 0.64 | 0.0 | 0.04 | 15.86 | 0.00 | 2.194 | 5.85 | 2.94 | 5.2 | 94.8 | 0.0 | 0.03 | 0.93 | 0.80 | 0.81 | 2.36 | 9551 | 1279 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8SAQ | 40275 | 2024-03-17 | 2023-04-01 | 3.9 | 4.17 | 3.91 | 4.1 | 0.005 | 0.88 | 0.0 | 0.05 | 14.84 | 0.01 | 1.985 | 5.03 | 0.05 | 7.7 | 92.0 | 0.2 | -1.78 | 0.73 | 0.77 | 2.26 | 4.1 | 0.005 | 0.91 | 1.0 | 0.05 | 15.31 | 0.00 | 1.460 | 13.17 | 3.08 | 7.9 | 91.9 | 0.1 | -1.35 | 1.16 | 0.75 | 0.80 | 1.85 | 18946 | 2364 | 21 | 0 | 36 | 0 | 0 | logfile |
✔ | 7oCH | 12807 | 2024-03-14 | 2021-04-26 | 3.14 | 3.53 | 3.21 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 15.97 | 0.00 | 2.072 | 3.99 | 3.80 | 6.6 | 93.4 | 0.0 | -2.88 | 0.89 | 0.86 | 2.83 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 16.42 | 0.00 | 2.018 | 4.31 | 3.61 | 7.5 | 92.5 | 0.0 | 0.17 | 0.48 | 0.90 | 0.90 | 2.46 | 9516 | 1181 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6JYL | 9718 | 2024-03-17 | 2019-04-26 | 3.37 | 4.00 | — | 3.4 | 0.008 | 0.85 | 0.0 | 0.05 | 24.56 | 0.01 | 2.086 | 2.75 | 0.28 | 4.8 | 95.0 | 0.2 | -3.67 | 0.90 | 0.87 | 2.92 | 3.4 | 0.003 | 0.57 | 0.0 | 0.03 | 24.29 | 0.00 | 1.441 | 7.47 | 0.65 | 4.1 | 95.9 | 0.0 | 0.87 | 0.54 | 0.90 | 0.88 | 1.81 | 16136 | 1265 | 11 | 292 | 3 | 0 | 0 | logfile |
✔ | 6B46 | 7050 | 2024-03-18 | 2017-09-25 | 3.1 | 3.16 | — | 3.1 | 0.006 | 0.87 | 0.0 | 0.05 | 14.10 | 0.01 | 2.296 | 4.10 | 0.18 | 8.5 | 91.5 | 0.0 | -3.95 | 0.69 | 0.82 | 3.45 | 3.1 | 0.006 | 0.71 | 0.0 | 0.04 | 16.82 | 0.00 | 2.090 | 9.03 | 2.72 | 9.9 | 90.1 | 0.0 | -1.33 | 1.00 | 0.71 | 0.85 | 2.76 | 18344 | 2308 | 10 | 60 | 0 | 0 | 0 | logfile |
✔ | 6NBF | 0410 | 2024-03-14 | 2018-12-07 | 3.0 | 3.52 | — | 3.5 | 0.005 | 0.90 | 0.0 | 0.06 | 9.17 | 0.01 | 2.307 | 3.07 | 0.10 | 3.0 | 97.0 | 0.0 | -1.40 | 0.64 | 0.79 | 3.11 | 3.5 | 0.004 | 0.59 | 0.0 | 0.04 | 13.81 | 0.00 | 2.090 | 6.25 | 2.75 | 2.0 | 98.0 | 0.0 | 0.61 | 1.19 | 0.53 | 0.75 | 2.58 | 9424 | 1148 | 7 | 0 | 10 | 0 | 0 | logfile |
✔ | 7YNT | 33971 | 2024-03-10 | 2022-07-31 | 3.1 | 2.98 | 2.27 | 4.1 | 0.004 | 0.59 | 0.0 | 0.06 | 11.35 | 0.00 | 2.275 | 13.34 | 0.00 | 8.9 | 91.1 | 0.0 | -5.55 | 0.42 | 0.70 | 4.17 | 4.1 | 0.004 | 0.67 | 0.0 | 0.06 | 13.80 | 0.00 | 2.244 | 11.90 | 1.25 | 14.9 | 85.1 | 0.0 | -4.55 | 0.45 | 0.36 | 0.64 | 3.22 | 2364 | 348 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CU3 | 30470 | 2024-03-15 | 2020-08-20 | 2.65 | 2.44 | — | 2.6 | 0.009 | 0.99 | 0.0 | 0.05 | 19.75 | 0.01 | 2.196 | 6.79 | 3.43 | 4.6 | 95.4 | 0.0 | -1.75 | 0.59 | 0.83 | 4.41 | 2.5 | 0.004 | 0.59 | 0.0 | 0.04 | 17.18 | 0.00 | 2.214 | 7.53 | 1.72 | 4.1 | 95.9 | 0.0 | 1.34 | 1.13 | 0.60 | 0.85 | 3.78 | 12209 | 1450 | 3 | 0 | 17 | 0 | 0 | logfile |
✔ | 6SJB | 10214 | 2024-03-19 | 2019-08-13 | 3.7 | 3.91 | — | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 13.43 | 0.01 | 2.227 | 4.46 | 2.57 | 2.3 | 97.7 | 0.0 | -3.60 | 0.82 | 0.81 | 1.93 | 3.7 | 0.006 | 0.71 | 0.0 | 0.04 | 16.72 | 0.00 | 2.052 | 13.59 | 2.61 | 4.4 | 95.6 | 0.0 | 0.89 | 2.02 | 0.84 | 0.85 | 1.95 | 24115 | 2847 | 4 | 68 | 0 | 0 | 0 | logfile |
✔ | 7SWP | 25478 | 2024-03-10 | 2021-11-20 | 3.8 | 3.74 | — | 4.0 | 0.008 | 0.92 | 0.0 | 0.05 | 12.87 | 0.01 | 2.202 | 40.14 | 0.00 | 12.1 | 87.9 | 0.0 | -2.17 | 0.51 | 0.71 | 1.63 | 3.9 | 0.004 | 0.83 | 0.0 | 0.05 | 15.86 | 0.01 | 2.107 | 24.48 | 6.87 | 7.2 | 92.8 | 0.0 | -1.17 | 2.19 | 0.52 | 0.75 | 1.29 | 3372 | 436 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XQH | 33396 | 2024-03-14 | 2022-05-07 | 3.8 | 4.45 | 3.57 | 4.2 | 0.005 | 0.78 | 0.0 | 0.04 | 15.53 | 0.01 | 2.337 | 5.28 | 2.23 | 3.6 | 95.9 | 0.5 | -2.01 | 0.77 | 0.84 | 2.84 | 4.2 | 0.004 | 0.94 | 1.0 | 0.04 | 16.94 | 0.00 | 2.147 | 8.27 | 4.93 | 3.7 | 95.7 | 0.6 | 2.53 | 1.48 | 0.77 | 0.85 | 2.01 | 9774 | 1200 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QM4 | 4587 | 2024-03-15 | 2019-02-01 | 3.8 | 3.88 | 3.83 | 3.8 | 0.007 | 0.99 | 0.0 | 0.05 | 15.63 | 0.01 | 2.242 | 3.99 | 0.00 | 4.8 | 95.2 | 0.0 | -5.94 | 0.61 | 0.79 | 1.31 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 17.61 | 0.00 | 2.137 | 8.99 | 2.84 | 4.4 | 95.6 | 0.0 | 0.82 | 0.69 | 0.63 | 0.79 | 1.30 | 10580 | 1308 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XQJ | 33398 | 2024-03-14 | 2022-05-07 | 4.0 | 4.56 | 3.73 | 4.2 | 0.007 | 0.84 | 0.0 | 0.05 | 15.98 | 0.01 | 2.401 | 6.40 | 6.01 | 6.5 | 93.5 | 0.0 | -2.82 | 0.78 | 0.85 | — | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 16.51 | 0.00 | 2.256 | 9.82 | 3.10 | 4.1 | 95.9 | 0.0 | 1.25 | 0.72 | 0.78 | 0.85 | — | 9960 | 1224 | 6 | 0 | 0 | 0 | 0 | logfile |