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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7A1D | 11606 | 2023-08-22 | 2020-08-12 | 4.19 | 4.02 | 4.19 | 4.1 | 0.006 | 1.04 | 0.0 | 0.06 | 10.62 | 0.01 | 2.253 | 7.83 | 0.35 | 8.4 | 91.6 | 0.0 | -4.40 | 0.83 | 0.73 | — | 3.8 | 0.019 | 1.12 | 0.0 | 0.05 | 12.69 | 0.01 | 2.050 | 23.57 | 0.00 | 10.0 | 90.0 | 0.0 | -1.97 | 1.05 | 0.86 | 0.79 | — | 33032 | 4252 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RGL | 24451 | 2023-08-27 | 2021-07-15 | 2.4 | 2.51 | — | 2.4 | 0.013 | 1.20 | 0.0 | 0.06 | 15.88 | 0.01 | 2.317 | 3.77 | 3.66 | 3.7 | 96.2 | 0.2 | -1.40 | 0.65 | 0.88 | 5.76 | 2.4 | 0.003 | 0.55 | 0.0 | 0.04 | 16.03 | 0.00 | 1.994 | 3.28 | 1.28 | 3.5 | 96.5 | 0.0 | 0.39 | 0.96 | 0.66 | 0.89 | 5.56 | 50936 | 3328 | 16 | 0 | 16 | 0 | 25408 | logfile |
✔ | 6DV6 | 8915 | 2023-08-25 | 2018-06-22 | 3.9 | 4.12 | — | 4.2 | 0.010 | 1.32 | 0.0 | 0.07 | 14.14 | 0.01 | 1.835 | 8.19 | 7.64 | 6.5 | 93.5 | 0.0 | -4.93 | 0.71 | 0.80 | 1.58 | 4.2 | 0.004 | 0.85 | 0.0 | 0.05 | 15.98 | 0.00 | 2.082 | 11.46 | 0.93 | 4.7 | 95.3 | 0.0 | -2.14 | 1.88 | 0.66 | 0.85 | 1.41 | 40950 | 5370 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ToA | 10542 | 2023-08-15 | 2019-12-11 | 3.47 | 3.57 | — | 3.5 | 0.009 | 1.24 | 0.0 | 0.07 | 10.85 | 0.01 | 2.110 | 11.06 | 0.54 | 11.8 | 88.0 | 0.1 | -5.85 | 0.77 | 0.86 | 3.69 | 3.5 | 0.003 | 0.77 | 0.0 | 0.04 | 14.76 | 0.01 | 2.124 | 12.06 | 0.63 | 6.9 | 93.0 | 0.1 | -1.82 | 1.61 | 0.76 | 0.87 | 2.57 | 67896 | 9006 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E87 | 31011 | 2023-08-13 | 2021-03-01 | 3.4 | 2.60 | 3.28 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 13.86 | 0.00 | 2.111 | 13.52 | 0.00 | 7.0 | 93.0 | 0.0 | -0.03 | 0.60 | 0.77 | 1.57 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 16.48 | 0.00 | 2.181 | 13.63 | 0.49 | 6.6 | 93.4 | 0.0 | 0.30 | 1.19 | 0.60 | 0.79 | 1.33 | 13304 | 1664 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 7P14 | 13155 | 2023-08-09 | 2021-07-01 | 3.66 | 3.82 | 3.50 | 3.8 | 0.004 | 0.64 | 0.0 | 0.04 | 16.56 | 0.00 | 2.295 | 7.45 | 0.00 | 2.7 | 97.3 | 0.0 | 1.11 | 0.60 | 0.78 | 2.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3796 | 454 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7WED | 32447 | 2023-08-09 | 2021-12-23 | 3.5 | 3.62 | — | 3.7 | 0.003 | 0.70 | 0.0 | 0.05 | 13.75 | 0.01 | 2.285 | 7.13 | 0.00 | 8.2 | 91.8 | 0.0 | -1.64 | 0.57 | 0.77 | 2.25 | 3.6 | 0.004 | 0.69 | 0.0 | 0.04 | 16.64 | 0.00 | 2.248 | 7.29 | 0.54 | 9.2 | 90.8 | 0.0 | -1.26 | 1.14 | 0.57 | 0.79 | 1.83 | 3358 | 431 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E39 | 30977 | 2023-08-09 | 2021-02-08 | 3.7 | 3.11 | — | 2.9 | 0.005 | 0.77 | 0.0 | 0.05 | 14.37 | 0.01 | 2.130 | 15.98 | 0.00 | 10.1 | 89.9 | 0.0 | -3.52 | 0.50 | 0.74 | 2.30 | 2.9 | 0.003 | 0.63 | 0.0 | 0.05 | 15.71 | 0.00 | 2.190 | 10.48 | 0.00 | 5.2 | 94.8 | 0.0 | -2.15 | 0.43 | 0.49 | 0.73 | 2.16 | 3074 | 414 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6CAJ | 7442 | 2023-08-18 | 2018-01-31 | 2.8 | 2.84 | — | 4.2 | 0.008 | 0.88 | 0.0 | 0.17 | 9.84 | 0.01 | 1.467 | 5.88 | 0.24 | 4.5 | 95.5 | 0.0 | -3.63 | 0.33 | 0.15 | 2.28 | 2.9 | 0.004 | 0.69 | 0.0 | 0.04 | 16.38 | 0.00 | 2.142 | 11.46 | 2.76 | 5.1 | 94.9 | 0.0 | -0.19 | 1.21 | 0.75 | 0.85 | 2.84 | 24295 | 3210 | 11 | 0 | 1 | 0 | 0 | logfile |
✔ | 8DBi | 27285 | 2023-08-13 | 2022-06-14 | 2.0 | 2.07 | 2.03 | 2.0 | 0.012 | 1.17 | 0.0 | 0.06 | 18.16 | 0.04 | 1.910 | 5.92 | 1.15 | 4.3 | 95.7 | 0.0 | 0.57 | 0.73 | 0.87 | 6.48 | 2.0 | 0.003 | 1.62 | 0.0 | 0.05 | 16.44 | 0.00 | 1.844 | 5.01 | 1.91 | 3.9 | 96.1 | 0.0 | 0.83 | 0.89 | 0.74 | 0.91 | 6.36 | 14496 | 1854 | 18 | 0 | 30 | 12 | 0 | logfile |
✔ | 6SL1 | 10234 | 2023-08-16 | 2019-08-16 | 3.6 | 3.62 | — | 3.5 | 0.011 | 0.83 | 0.0 | 0.05 | 14.89 | 0.01 | 2.016 | 13.54 | 6.72 | 8.4 | 91.4 | 0.2 | -4.42 | 0.72 | 0.80 | 2.39 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 16.30 | 0.00 | 2.109 | 8.24 | 0.26 | 4.0 | 96.0 | 0.0 | 0.30 | 0.82 | 0.72 | 0.80 | 1.85 | 21041 | 2652 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7MCA | 23755 | 2023-08-18 | 2021-04-01 | 3.6 | 3.75 | 3.58 | 3.8 | 0.007 | 0.98 | 0.0 | 0.06 | 19.21 | 0.01 | 1.053 | 8.11 | 0.75 | 8.2 | 91.7 | 0.1 | -5.13 | 0.77 | 0.79 | 2.32 | 3.7 | 0.005 | 0.70 | 0.0 | 0.04 | 20.09 | 0.00 | 1.910 | 11.17 | 0.71 | 9.2 | 90.8 | 0.0 | -2.25 | 1.98 | 0.77 | 0.81 | 2.15 | 24692 | 2760 | 13 | 100 | 8 | 0 | 0 | logfile |
✔ | 6TNT | 10536 | 2023-08-12 | 2019-12-10 | 3.78 | 4.15 | — | 3.8 | 0.005 | 0.66 | 0.0 | 0.04 | 14.23 | 0.00 | 1.949 | 14.34 | 9.38 | 7.1 | 92.7 | 0.2 | -2.25 | 0.90 | 0.85 | 1.37 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 15.47 | 0.00 | 2.020 | 13.73 | 0.33 | 6.6 | 93.4 | 0.1 | 0.70 | 1.31 | 0.90 | 0.85 | 1.12 | 63827 | 8109 | 21 | 0 | 3 | 0 | 0 | logfile |
✔ | 7ND3 | 12274 | 2023-08-19 | 2021-01-30 | 3.7 | 3.99 | — | 3.8 | 0.003 | 0.56 | 0.0 | 0.05 | 11.33 | 0.00 | 2.159 | 3.51 | 0.64 | 3.7 | 96.2 | 0.1 | -0.43 | 0.82 | 0.83 | 1.98 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 13.80 | 0.00 | 2.078 | 9.15 | 0.19 | 3.8 | 96.1 | 0.1 | 0.41 | 0.72 | 0.83 | 0.84 | 1.80 | 25050 | 3194 | 19 | 0 | 49 | 0 | 0 | logfile |
✔ | 8GXZ | 34366 | 2023-08-20 | 2022-09-21 | 3.1 | 2.45 | 3.10 | 3.0 | 0.006 | 0.54 | 0.0 | 0.04 | 13.81 | 0.00 | 1.826 | 6.59 | 0.00 | 4.2 | 95.8 | 0.0 | 0.46 | 0.54 | 0.74 | 3.39 | 3.0 | 0.005 | 0.66 | 0.0 | 0.05 | 16.70 | 0.01 | 1.903 | 8.11 | 0.26 | 3.2 | 96.8 | 0.0 | 0.03 | 2.14 | 0.68 | 0.83 | 3.06 | 29499 | 3788 | 14 | 0 | 3 | 0 | 0 | logfile |
✔ | 7Z7X | 14539 | 2023-08-19 | 2022-03-16 | 3.3 | 3.02 | 3.24 | 3.2 | 0.006 | 0.72 | 0.0 | 0.05 | 13.34 | 0.00 | 2.149 | 8.13 | 0.11 | 4.3 | 95.7 | 0.0 | -0.13 | 0.73 | 0.82 | 2.95 | 3.2 | 0.004 | 0.57 | 0.0 | 0.04 | 14.75 | 0.00 | 2.169 | 7.72 | 0.39 | 4.2 | 95.8 | 0.0 | 0.24 | 0.34 | 0.74 | 0.84 | 2.58 | 26906 | 3353 | 29 | 0 | 66 | 0 | 0 | logfile |
✔ | 6J2Q | 9771 | 2023-08-09 | 2019-01-02 | 3.8 | 3.95 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.17 | 0.00 | 2.202 | 6.58 | 0.00 | 5.5 | 94.4 | 0.1 | -3.50 | 0.77 | 0.68 | 0.88 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 15.50 | 0.00 | 2.058 | 15.76 | 0.38 | 4.1 | 95.8 | 0.1 | -0.48 | 2.27 | 0.82 | 0.76 | 1.06 | 106311 | 13518 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CAC | 30326 | 2023-08-19 | 2020-06-08 | 3.55 | 3.83 | — | 3.6 | 0.008 | 0.89 | 0.0 | 0.06 | 9.66 | 0.00 | 1.078 | 25.83 | 1.02 | 5.5 | 94.3 | 0.3 | -3.22 | 0.77 | 0.65 | 2.65 | 3.6 | 0.006 | 0.71 | 0.0 | 0.05 | 12.28 | 0.00 | 2.130 | 13.82 | 0.16 | 5.2 | 94.7 | 0.1 | -0.88 | 1.22 | 0.86 | 0.78 | 2.26 | 28122 | 3499 | 23 | 0 | 60 | 0 | 0 | logfile |
✔ | 6M52 | 30083 | 2023-08-22 | 2020-03-09 | 2.6 | 2.82 | — | 2.8 | 0.009 | 0.94 | 0.0 | 0.06 | 15.32 | 0.00 | 2.390 | 0.63 | 0.00 | 4.7 | 95.3 | 0.0 | -0.23 | 0.69 | 0.86 | 3.58 | 2.8 | 0.003 | 0.55 | 0.0 | 0.04 | 17.56 | 0.00 | 2.339 | 1.00 | 1.44 | 3.7 | 96.3 | 0.0 | 3.71 | 0.32 | 0.80 | 0.91 | 2.44 | 33382 | 4104 | 38 | 0 | 6 | 8 | 0 | logfile |
✔ | 6J30 | 9773 | 2023-08-09 | 2019-01-03 | 4.5 | 4.74 | — | 4.6 | 0.002 | 0.44 | 0.0 | 0.04 | 7.35 | 0.00 | 2.093 | 8.60 | 0.07 | 6.4 | 93.4 | 0.3 | -3.38 | 0.86 | 0.72 | — | 4.5 | 0.004 | 0.76 | 0.0 | 0.04 | 12.18 | 0.00 | 1.918 | 21.54 | 0.01 | 5.4 | 94.4 | 0.2 | -0.88 | 1.91 | 0.89 | 0.77 | — | 106227 | 13504 | 47 | 0 | 0 | 0 | 0 | logfile |