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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7U13 | 26276 | 2023-02-17 | 2022-02-19 | 2.9 | 3.67 | — | 4.2 | 0.017 | 2.41 | 0.0 | 0.07 | 17.78 | 0.01 | 2.120 | 29.95 | 6.30 | 11.3 | 88.0 | 0.8 | -3.06 | 0.30 | 0.47 | 1.37 | 4.2 | 0.005 | 0.96 | 0.0 | 0.06 | 18.45 | 0.00 | 2.194 | 14.61 | 3.67 | 12.3 | 87.7 | 0.0 | -4.21 | 6.72 | 0.33 | 0.56 | 1.63 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7RTN | 24684 | 2023-02-17 | 2021-08-13 | 3.4 | 3.47 | — | 3.5 | 0.004 | 0.63 | 0.0 | 0.04 | 14.58 | 0.00 | 2.298 | 6.03 | 0.00 | 6.1 | 93.9 | 0.0 | 0.60 | 0.31 | 0.74 | 3.40 | 3.5 | 0.002 | 0.55 | 0.0 | 0.04 | 16.40 | 0.00 | 2.267 | 7.60 | 0.18 | 4.3 | 95.7 | 0.0 | 1.41 | 0.36 | 0.31 | 0.77 | 2.79 | 6018 | 810 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VZL | 8749 | 2023-02-21 | 2017-05-29 | 3.9 | 4.38 | — | 19.0 | 0.006 | 0.96 | 0.0 | 0.05 | 14.28 | 0.01 | 2.216 | 7.72 | 0.25 | 8.4 | 91.6 | 0.0 | -4.13 | 0.31 | 0.03 | -0.03 | 17.0 | 0.002 | 0.66 | 0.0 | 0.04 | 15.70 | 0.00 | 1.245 | 12.48 | 0.50 | 5.0 | 95.0 | 0.0 | -1.31 | 1.26 | 0.38 | 0.19 | 0.61 | 13915 | 1451 | 3 | 115 | 1 | 0 | 0 | logfile |
✔ | 6DLU | 7957 | 2023-02-20 | 2018-06-02 | 3.75 | 3.84 | — | 3.8 | 0.009 | 0.94 | 0.0 | 0.05 | 9.95 | 0.00 | 1.944 | 12.48 | 0.23 | 5.7 | 94.3 | 0.0 | -2.78 | 0.31 | 0.77 | 1.09 | 3.7 | 0.002 | 0.69 | 0.0 | 0.04 | 13.94 | 0.00 | 1.984 | 8.44 | 0.30 | 4.4 | 95.6 | 0.0 | 0.08 | 2.39 | 0.32 | 0.81 | 1.17 | 11991 | 1481 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 3J7A | 2660 | 2023-02-27 | 2014-06-03 | 3.2 | 3.24 | 3.33 | 3.2 | 0.008 | 1.39 | 49.0 | 0.10 | 19.81 | 0.01 | 1.715 | 4.55 | 15.41 | 10.5 | 85.4 | 4.2 | -2.49 | 0.31 | 0.55 | -0.02 | 3.2 | 0.003 | 0.70 | 0.0 | 0.04 | 18.04 | 0.01 | 1.866 | 17.03 | 1.05 | 8.0 | 90.8 | 1.2 | -1.89 | 2.71 | 0.40 | 0.77 | 1.02 | 68866 | 4106 | 35 | 1682 | 69 | 0 | 0 | logfile |
✔ | 7ZFW | 14704 | 2023-02-20 | 2022-04-01 | 3.8 | 4.62 | 3.46 | 3.0 | 0.006 | 0.83 | 0.0 | 0.05 | 17.92 | 0.03 | 2.266 | 2.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.81 | — | 3.0 | 0.009 | 0.90 | 0.0 | 0.04 | 20.26 | 0.01 | 1.952 | 38.01 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.55 | 0.33 | 0.85 | — | 13188 | 0 | 1 | 615 | 0 | 0 | 0 | logfile |
✔ | 7K23 | 22641 | 2023-02-24 | 2020-09-08 | 3.3 | 3.44 | 3.16 | 3.4 | 0.007 | 0.81 | 0.0 | 0.05 | 17.18 | 0.00 | 1.620 | 19.51 | 5.40 | 9.3 | 90.5 | 0.2 | -3.86 | 0.32 | 0.62 | 2.33 | 3.4 | 0.004 | 0.68 | 0.0 | 0.05 | 17.19 | 0.00 | 2.101 | 9.50 | 0.25 | 8.9 | 91.0 | 0.1 | -1.79 | 1.66 | 0.41 | 0.85 | 2.68 | 21923 | 2781 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6R4R | 4727 | 2023-02-17 | 2019-03-23 | 3.4 | 3.01 | 1.77 | 3.8 | 0.008 | 1.43 | 0.0 | 0.08 | 10.87 | 0.01 | 2.308 | 6.73 | 0.00 | 12.0 | 88.0 | 0.0 | -5.16 | 0.32 | 0.64 | 5.08 | 3.6 | 0.005 | 0.81 | 0.0 | 0.05 | 16.69 | 0.00 | 2.109 | 15.14 | 0.68 | 9.1 | 90.9 | 0.0 | -4.84 | 3.88 | 0.31 | 0.68 | 3.65 | 4312 | 539 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HRE | 0259 | 2023-02-17 | 2018-09-26 | 3.2 | 2.74 | 2.87 | 3.3 | 0.019 | 1.47 | 0.0 | 0.11 | 13.34 | 0.01 | 2.474 | 6.01 | 0.00 | 12.0 | 88.0 | 0.0 | -4.17 | 0.32 | 0.80 | 4.40 | 2.8 | 0.005 | 0.88 | 0.0 | 0.05 | 17.64 | 0.00 | 2.152 | 9.22 | 0.25 | 8.4 | 91.6 | 0.0 | -3.58 | 0.82 | 0.29 | 0.78 | 3.78 | 3522 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M3L | 3434 | 2023-02-23 | 2016-10-15 | 3.8 | 2.49 | — | 3.8 | 0.013 | 1.53 | 7.0 | 0.08 | 12.48 | 0.01 | 1.442 | 10.28 | 0.59 | 7.4 | 91.5 | 1.1 | -4.86 | 0.32 | 0.76 | 2.04 | 3.6 | 0.004 | 0.76 | 0.0 | 0.04 | 16.98 | 0.00 | 2.103 | 11.76 | 1.08 | 5.3 | 94.5 | 0.2 | -0.26 | 0.89 | 0.34 | 0.75 | 1.29 | 19007 | 2394 | 27 | 0 | 12 | 0 | 0 | logfile |
✔ | 6XTB | 10618 | 2023-02-16 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.005 | 1.12 | 0.0 | 0.05 | 9.13 | 0.00 | 2.119 | 10.22 | 0.00 | 25.1 | 74.9 | 0.0 | -5.72 | 2.48 | 0.34 | 0.65 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK5 | 14038 | 2023-02-19 | 2021-12-17 | 1.92 | 1.67 | 1.83 | 2.2 | 0.011 | 1.89 | 4.0 | 0.10 | 10.96 | 0.01 | 2.401 | 0.10 | 0.00 | 4.5 | 95.5 | 0.0 | -1.58 | 0.32 | 0.78 | 6.85 | 2.2 | 0.004 | 0.63 | 0.0 | 0.05 | 18.16 | 0.01 | 2.237 | 3.82 | 1.88 | 3.9 | 96.1 | 0.0 | -1.69 | 1.47 | 0.36 | 0.82 | 7.53 | 10485 | 666 | 18 | 0 | 36 | 0 | 5337 | logfile |
✔ | 7RTo | 24685 | 2023-02-17 | 2021-08-13 | 3.8 | 3.83 | — | 3.8 | 0.004 | 0.82 | 0.0 | 0.05 | 14.32 | 0.00 | 2.200 | 8.47 | 0.16 | 5.6 | 94.4 | 0.0 | 1.09 | 0.32 | 0.76 | 2.41 | 3.8 | 0.002 | 0.64 | 0.0 | 0.04 | 16.57 | 0.00 | 2.236 | 7.84 | 0.16 | 5.3 | 94.7 | 0.0 | 1.56 | 0.51 | 0.33 | 0.78 | 1.86 | 6607 | 888 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2023-02-19 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.003 | 0.80 | 0.0 | 0.04 | 13.50 | 0.01 | 2.094 | 15.68 | 0.00 | 4.9 | 95.1 | 0.0 | 0.82 | 1.46 | 0.41 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oZH | 13124 | 2023-02-17 | 2021-06-28 | 3.02 | 3.20 | 1.84 | 3.3 | 0.024 | 1.40 | 0.0 | 0.09 | 7.44 | 0.01 | 2.546 | 14.72 | 0.00 | 5.4 | 94.6 | 0.0 | -2.78 | 0.33 | 0.60 | 4.68 | 3.2 | 0.004 | 0.69 | 0.0 | 0.05 | 15.03 | 0.00 | 2.382 | 17.11 | 2.05 | 8.2 | 91.8 | 0.0 | -2.61 | 2.53 | 0.40 | 0.69 | 0.33 | 3890 | 580 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W2E | 21526 | 2023-02-23 | 2020-03-05 | 4.4 | 4.45 | — | 4.4 | 0.006 | 1.04 | 1.0 | 0.06 | 10.30 | 0.01 | 1.618 | 7.99 | 0.68 | 4.5 | 95.1 | 0.4 | -2.37 | 0.33 | 0.53 | — | 4.4 | 0.004 | 0.82 | 0.0 | 0.05 | 13.54 | 0.01 | 2.053 | 16.83 | 0.07 | 6.5 | 93.4 | 0.1 | -1.20 | 1.37 | 0.40 | 0.75 | — | 62525 | 7943 | 19 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TLD | 25988 | 2023-02-24 | 2022-01-18 | 2.89 | 3.35 | — | 3.3 | 0.013 | 1.80 | 0.0 | 0.09 | 13.31 | 0.01 | 2.524 | 0.07 | 0.94 | 5.2 | 94.6 | 0.2 | -1.25 | 0.33 | 0.48 | 3.75 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.32 | 0.00 | 2.161 | 5.99 | 1.33 | 3.4 | 96.6 | 0.0 | 0.25 | 0.62 | 0.59 | 0.77 | 3.01 | 22812 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CAJ | 7442 | 2023-02-25 | 2018-01-31 | 2.8 | 2.84 | — | 4.2 | 0.008 | 0.88 | 0.0 | 0.17 | 9.84 | 0.01 | 1.467 | 5.88 | 0.24 | 4.5 | 95.5 | 0.0 | -3.63 | 0.33 | 0.15 | 2.28 | 2.9 | 0.004 | 0.69 | 0.0 | 0.04 | 16.38 | 0.00 | 2.142 | 11.46 | 2.76 | 5.1 | 94.9 | 0.0 | -0.19 | 1.21 | 0.75 | 0.85 | 2.84 | 24295 | 3210 | 11 | 0 | 1 | 0 | 0 | logfile |
✔ | 7QKY | 14057 | 2023-02-17 | 2021-12-19 | 1.86 | 2.10 | 1.91 | 2.0 | 0.011 | 1.75 | 3.0 | 0.09 | 12.76 | 0.01 | 2.522 | 1.04 | 0.61 | 4.7 | 95.3 | 0.0 | -3.08 | 0.33 | 0.75 | 8.32 | 2.0 | 0.004 | 0.74 | 0.0 | 0.05 | 16.56 | 0.00 | 2.028 | 5.37 | 0.61 | 6.2 | 93.8 | 0.0 | -3.22 | 1.00 | 0.39 | 0.84 | 7.47 | 5760 | 396 | 6 | 0 | 0 | 0 | 2862 | logfile |
✔ | 7V49 | 31704 | 2023-02-16 | 2021-08-12 | 3.4 | 3.45 | — | 4.1 | 0.007 | 1.01 | 0.0 | 0.06 | 13.70 | 0.00 | 2.279 | 22.06 | 0.00 | 39.7 | 60.3 | 0.0 | -7.67 | 0.33 | 0.73 | 5.03 | 4.1 | 0.003 | 0.73 | 0.0 | 0.05 | 14.81 | 0.00 | 2.500 | 7.22 | 0.00 | 13.2 | 86.8 | 0.0 | -5.75 | 1.27 | 0.31 | 0.69 | 4.86 | 1221 | 180 | 3 | 0 | 0 | 0 | 0 | logfile |