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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5MPD | 3534 | 2024-03-24 | 2016-12-16 | 4.1 | 4.14 | — | 4.1 | 0.035 | 3.40 | 330.0 | 0.20 | 17.76 | 0.03 | 0.656 | 3.82 | 2.78 | 5.6 | 92.3 | 2.1 | -2.14 | 0.21 | 0.37 | — | 4.1 | 0.004 | 0.84 | 0.0 | 0.04 | 15.47 | 0.00 | 2.060 | 18.49 | 0.02 | 6.2 | 93.6 | 0.2 | -0.95 | 1.33 | 0.28 | 0.61 | — | 40974 | 5142 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XZX | 33533 | 2024-03-17 | 2022-06-03 | 4.53 | 5.42 | 4.49 | 4.5 | 0.006 | 0.99 | 0.0 | 0.06 | 25.64 | 0.00 | 1.688 | 10.77 | 0.15 | 1.7 | 98.3 | 0.0 | 0.69 | 0.69 | 0.37 | — | 4.4 | 0.004 | 0.62 | 0.0 | 0.04 | 25.36 | 0.00 | 2.110 | 12.92 | 0.00 | 1.4 | 98.6 | 0.0 | 1.14 | 1.70 | 0.90 | 0.82 | — | 19270 | 1554 | 14 | 342 | 0 | 0 | 0 | logfile |
✔ | 8JoU | 36462 | 2024-03-12 | 2023-06-08 | 4.1 | 6.13 | 3.95 | 3.9 | 0.004 | 0.83 | 0.0 | 0.05 | 12.09 | 0.01 | 0.759 | 16.82 | 0.49 | 7.7 | 90.4 | 1.9 | -1.54 | 0.17 | 0.37 | — | 3.1 | 0.003 | 0.69 | 0.0 | 0.04 | 11.93 | 0.00 | 2.055 | 23.73 | 0.08 | 8.5 | 89.8 | 1.7 | -1.53 | 1.41 | 0.23 | 0.86 | — | 62425 | 8135 | 70 | 0 | 590 | 0 | 0 | logfile |
✔ | 8E5L | 27914 | 2024-03-18 | 2022-08-22 | 4.2 | 8.91 | 5.82 | 7.6 | 0.003 | 0.64 | 0.0 | 0.04 | 11.89 | 0.00 | 1.299 | 26.62 | 1.63 | 1.3 | 98.4 | 0.3 | -0.83 | 0.63 | 0.37 | — | 7.5 | 0.003 | 0.67 | 0.0 | 0.04 | 12.16 | 0.00 | 1.045 | 20.25 | 0.05 | 2.6 | 97.4 | 0.0 | 0.66 | 1.20 | 0.89 | 0.83 | — | 20058 | 2502 | 13 | 9 | 18 | 0 | 0 | logfile |
✔ | 7KQE | 22997 | 2024-03-15 | 2020-11-15 | 2.88 | 3.80 | 2.90 | 3.4 | 0.012 | 1.80 | 8.0 | 0.10 | 13.99 | 0.01 | 2.478 | 0.25 | 1.08 | 6.3 | 93.6 | 0.1 | -1.09 | 0.73 | 0.37 | 2.42 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 14.16 | 0.00 | 2.036 | 4.36 | 0.59 | 4.5 | 95.5 | 0.0 | 0.00 | 1.53 | 0.88 | 0.84 | 2.38 | 68370 | 4467 | 9 | 0 | 0 | 0 | 33744 | logfile |
✔ | 8ENR | 28277 | 2024-03-11 | 2022-09-30 | 3.8 | 4.03 | 4.04 | 4.3 | 0.004 | 0.80 | 0.0 | 0.05 | 14.88 | 0.00 | 2.204 | 17.13 | 0.89 | 0.7 | 99.3 | 0.0 | 1.04 | 0.43 | 0.37 | 0.94 | 4.2 | 0.007 | 1.12 | 0.0 | 0.05 | 17.60 | 0.00 | 2.048 | 35.57 | 3.72 | 15.1 | 84.9 | 0.0 | -3.97 | 2.50 | 0.51 | 0.50 | 2.45 | 6392 | 888 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UE9 | 20751 | 2024-03-17 | 2019-09-20 | 2.9 | 3.89 | — | 4.2 | 0.007 | 1.05 | 0.0 | 0.06 | 14.61 | 0.01 | 2.241 | 3.10 | 0.32 | 11.2 | 88.8 | 0.0 | -3.87 | 0.59 | 0.37 | 0.26 | 3.6 | 0.004 | 1.00 | 0.0 | 0.05 | 15.55 | 0.01 | 2.152 | 11.81 | 2.34 | 7.4 | 92.6 | 0.0 | -1.74 | 1.74 | 0.78 | 0.81 | 1.73 | 18227 | 2475 | 17 | 0 | 12 | 0 | 0 | logfile |
✔ | 8FEL | 29032 | 2024-03-14 | 2022-12-06 | 4.64 | 5.02 | 4.40 | 4.5 | 0.001 | 0.35 | 0.0 | 0.04 | 14.88 | 0.00 | 2.191 | 6.97 | 1.98 | 3.8 | 96.2 | 0.0 | -0.24 | 0.70 | 0.37 | — | 4.2 | 0.002 | 0.54 | 0.0 | 0.04 | 13.03 | 0.00 | 2.273 | 10.05 | 0.00 | 4.6 | 95.4 | 0.0 | -0.37 | 1.69 | 0.73 | 0.44 | — | 9201 | 1191 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7RMC | 24560 | 2024-03-28 | 2021-07-27 | 3.5 | 3.50 | — | 3.6 | 0.013 | 2.05 | 44.0 | 0.15 | 17.28 | 0.02 | 2.304 | 1.80 | 1.65 | 4.6 | 95.1 | 0.4 | -1.78 | 0.26 | 0.38 | 2.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 106824 | 6732 | 24 | 0 | 24 | 0 | 53244 | logfile |
✔ | 8C5R | 16441 | 2024-03-19 | 2023-01-10 | 3.7 | 3.73 | 3.75 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 8.09 | 0.00 | 0.567 | 18.93 | 0.00 | 3.1 | 96.6 | 0.3 | -3.20 | 0.43 | 0.38 | 0.84 | 3.7 | 0.005 | 0.71 | 0.0 | 0.05 | 13.78 | 0.00 | 2.094 | 13.86 | 2.40 | 5.7 | 94.3 | 0.0 | -1.25 | 1.25 | 0.60 | 0.69 | 1.56 | 24969 | 3178 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G31 | 29687 | 2024-03-21 | 2023-02-06 | 3.2 | 2.13 | — | 3.3 | 0.006 | 0.95 | 1.0 | 0.05 | 24.19 | 0.01 | 2.203 | 5.22 | 0.76 | 6.2 | 93.8 | 0.1 | -2.51 | 0.49 | 0.38 | 0.07 | 2.0 | 0.006 | 0.71 | 0.0 | 0.04 | 23.68 | 0.01 | 1.962 | 12.45 | 4.07 | 8.2 | 91.7 | 0.1 | -1.67 | 1.32 | 0.74 | 0.74 | 1.87 | 144258 | 5922 | 52 | 4559 | 0 | 0 | 0 | logfile |
✔ | 7Pii | 13437 | 2024-03-15 | 2021-08-19 | 2.68 | 2.39 | — | 2.7 | 0.010 | 0.78 | 0.0 | 0.05 | 28.13 | 0.00 | 2.229 | 8.23 | 0.31 | 4.0 | 96.0 | 0.0 | -0.89 | 0.51 | 0.38 | 3.69 | 2.6 | 0.004 | 0.66 | 0.0 | 0.04 | 28.59 | 0.00 | 2.171 | 7.45 | 2.18 | 2.9 | 97.1 | 0.0 | 1.82 | 0.97 | 0.81 | 0.88 | 3.46 | 11192 | 779 | 12 | 245 | 0 | 0 | 0 | logfile |
✔ | 8i9B | 35264 | 2024-03-24 | 2023-02-06 | 3.5 | 4.25 | 3.87 | 3.6 | 0.009 | 0.93 | 0.0 | 0.07 | 17.47 | 0.01 | 1.899 | 19.34 | 9.83 | 8.2 | 90.1 | 1.8 | -3.51 | 0.57 | 0.38 | 0.54 | 3.9 | 0.003 | 0.77 | 0.0 | 0.05 | 16.42 | 0.00 | 2.062 | 11.60 | 2.78 | 7.5 | 92.3 | 0.2 | -0.93 | 1.14 | 0.74 | 0.64 | 0.49 | 39539 | 4786 | 49 | 0 | 103 | 0 | 0 | logfile |
✔ | 7M3L | 23656 | 2024-03-10 | 2021-03-18 | 3.2 | 4.99 | — | 3.3 | 0.009 | 0.97 | 0.0 | 0.06 | 15.05 | 0.01 | 1.551 | 6.78 | 0.30 | 9.1 | 90.6 | 0.3 | -3.19 | 0.29 | 0.38 | 0.40 | 3.1 | 0.004 | 0.76 | 0.0 | 0.04 | 15.43 | 0.00 | 2.143 | 17.65 | 2.11 | 8.6 | 91.3 | 0.1 | -1.11 | 3.79 | 0.46 | 0.76 | 2.18 | 6113 | 775 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V9C | 31815 | 2024-03-19 | 2021-08-24 | 4.5 | 3.01 | 4.36 | 3.5 | 0.002 | 0.44 | 0.0 | 0.03 | 28.92 | 0.00 | 2.240 | 8.56 | 1.27 | 5.0 | 94.1 | 0.9 | -0.37 | 0.60 | 0.38 | — | 2.9 | 0.005 | 0.77 | 0.0 | 0.04 | 29.15 | 0.01 | 2.069 | 23.07 | 0.32 | 5.1 | 94.6 | 0.3 | 0.35 | 1.59 | 0.73 | 0.60 | — | 23228 | 1518 | 18 | 546 | 0 | 0 | 0 | logfile |
✔ | 3JAU | 6366 | 2024-03-12 | 2015-06-24 | 4.8 | 4.76 | — | 6.0 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 10.72 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | 5.4 | 0.003 | 0.71 | 0.0 | 0.04 | 13.37 | 0.00 | 2.144 | 19.50 | 0.00 | 3.7 | 95.9 | 0.4 | -0.66 | 1.39 | 0.24 | 0.60 | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QGH | 13955 | 2024-03-24 | 2021-12-08 | 4.48 | 9.26 | — | 4.8 | 0.016 | 1.62 | 58.0 | 0.11 | 22.93 | 0.01 | 0.197 | 5.44 | 1.41 | 8.8 | 90.2 | 1.0 | -4.05 | 0.66 | 0.38 | — | 4.5 | 0.003 | 0.69 | 0.0 | 0.04 | 24.19 | 0.01 | 1.599 | 34.20 | 0.02 | 8.8 | 91.1 | 0.1 | -2.08 | 2.07 | 0.85 | 0.77 | — | 147973 | 6046 | 58 | 4716 | 3 | 9 | 0 | logfile |
✔ | 8HPQ | 34940 | 2024-03-10 | 2022-12-12 | 2.85 | 3.02 | 2.88 | 2.9 | 0.013 | 1.12 | 10.0 | 0.06 | 13.79 | 0.01 | 1.403 | 9.85 | 0.64 | 3.8 | 96.2 | 0.1 | -0.06 | 0.52 | 0.38 | 1.59 | 2.9 | 0.004 | 0.79 | 3.0 | 0.05 | 15.70 | 0.01 | 2.115 | 12.29 | 1.66 | 3.4 | 96.6 | 0.0 | 0.08 | 1.18 | 0.69 | 0.75 | 2.16 | 44355 | 5745 | 18 | 0 | 3 | 0 | 0 | logfile |
✔ | 7W0F | 32241 | 2024-03-16 | 2021-11-18 | 4.55 | 8.43 | — | 7.5 | 0.003 | 0.64 | 1.0 | 0.04 | 17.27 | 0.00 | 1.356 | 21.15 | 1.19 | 4.4 | 94.7 | 0.8 | -0.94 | 0.71 | 0.38 | — | 7.3 | 0.003 | 0.71 | 0.0 | 0.04 | 17.30 | 0.00 | 2.139 | 24.93 | 0.07 | 6.2 | 93.7 | 0.1 | -1.01 | 1.51 | 0.87 | 0.72 | — | 14097 | 1492 | 6 | 94 | 0 | 0 | 0 | logfile |
✔ | 5MPE | 3535 | 2024-03-24 | 2016-12-16 | 4.5 | 4.55 | — | 4.5 | 0.034 | 3.32 | 297.0 | 0.19 | 17.16 | 0.03 | 1.158 | 3.96 | 2.25 | 5.2 | 92.6 | 2.2 | -1.86 | 0.28 | 0.39 | — | 4.5 | 0.003 | 0.81 | 0.0 | 0.04 | 14.85 | 0.00 | 2.037 | 19.65 | 0.09 | 5.9 | 93.8 | 0.3 | -0.74 | 2.46 | 0.35 | 0.67 | — | 40974 | 5142 | 13 | 0 | 0 | 0 | 0 | logfile |