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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DST | 27688 | 2023-09-27 | 2022-07-22 | 3.2 | 2.71 | 2.73 | 3.4 | 0.046 | 2.10 | 0.0 | 0.03 | 22.27 | 0.00 | 2.205 | 41.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.44 | 0.57 | — | 2.4 | 0.136 | 9.30 | 191.0 | 0.34 | 28.93 | 0.03 | 1.065 | 133.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.16 | 0.55 | 0.80 | — | 3078 | 0 | 54 | 0 | 270 | 0 | 0 | logfile |
✔ | 6PoM | 20416 | 2023-09-28 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 17.29 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | 5.0 | 0.010 | 1.29 | 0.0 | 0.06 | 21.60 | 0.01 | 1.918 | 61.40 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.76 | 0.75 | 0.80 | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✔ | 7ZiR | 14738 | 2023-09-27 | 2022-04-08 | 2.5 | 2.51 | 2.04 | 2.7 | 0.002 | 0.34 | 0.0 | 0.03 | 9.02 | 0.00 | 2.317 | 1.65 | 0.00 | 2.0 | 98.0 | 0.0 | -3.82 | 0.48 | 0.90 | 7.46 | 2.7 | 0.003 | 0.46 | 0.0 | 0.04 | 12.12 | 0.00 | 2.316 | 0.28 | 0.00 | 2.9 | 97.1 | 0.0 | -3.83 | 1.03 | 0.50 | 0.93 | 7.96 | 2120 | 255 | 10 | 0 | 0 | 50 | 0 | logfile |
✔ | 7LQi | 23487 | 2023-09-29 | 2021-02-13 | 3.5 | 3.92 | — | 3.9 | 0.016 | 1.40 | 0.0 | 0.03 | 20.42 | 0.00 | 2.242 | 22.86 | 5.00 | 0.0 | 100.0 | 0.0 | -3.42 | 0.62 | 0.78 | 4.80 | 3.9 | 0.051 | 2.84 | 5.0 | 0.14 | 22.95 | 0.01 | 1.918 | 120.77 | 3.33 | 46.5 | 53.5 | 0.0 | -7.05 | 1.54 | 0.65 | 0.83 | 2.52 | 8400 | 800 | 100 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y5W | 33627 | 2023-09-29 | 2022-06-17 | 3.5 | 4.54 | 3.56 | 3.7 | 0.003 | 0.53 | 0.0 | 0.03 | 27.68 | 0.00 | 2.102 | 12.41 | 0.00 | 2.0 | 98.0 | 0.0 | 2.53 | 0.81 | 0.70 | 0.94 | 3.7 | 0.005 | 0.89 | 0.0 | 0.04 | 28.98 | 0.01 | 2.069 | 23.02 | 0.40 | 2.0 | 98.0 | 0.0 | 0.85 | 0.95 | 0.90 | 0.85 | 0.98 | 8811 | 579 | 10 | 202 | 0 | 0 | 0 | logfile |
✔ | 7X58 | 33011 | 2023-09-29 | 2022-03-04 | 3.93 | 4.15 | — | 3.9 | 0.003 | 0.56 | 0.0 | 0.03 | 27.31 | 0.00 | 2.221 | 7.16 | 0.00 | 0.9 | 99.1 | 0.0 | 0.68 | 0.86 | 0.80 | 1.58 | 3.9 | 0.005 | 0.74 | 0.0 | 0.04 | 29.86 | 0.00 | 2.200 | 15.92 | 0.99 | 3.1 | 96.9 | 0.0 | 2.24 | 1.39 | 0.88 | 0.84 | 0.66 | 9775 | 596 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 6WCB | 21605 | 2023-09-30 | 2020-03-30 | 3.17 | 3.17 | — | 3.2 | 0.005 | 0.41 | 0.0 | 0.03 | 13.87 | 0.00 | 2.128 | 2.50 | 1.29 | 0.8 | 99.2 | 0.0 | 0.58 | 0.55 | 0.77 | 2.89 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 15.55 | 0.00 | 2.072 | 3.71 | 0.16 | 1.7 | 98.3 | 0.0 | 3.40 | 1.29 | 0.54 | 0.79 | 2.46 | 11647 | 734 | 6 | 0 | 7 | 40 | 5904 | logfile |
✔ | 6XMF | 22257 | 2023-09-28 | 2020-06-30 | 3.1 | 3.28 | — | 3.3 | 0.002 | 0.56 | 0.0 | 0.03 | 16.46 | 0.00 | 2.246 | 8.60 | 0.00 | 6.8 | 93.2 | 0.0 | -1.78 | 0.68 | 0.71 | 2.25 | 3.2 | 0.003 | 0.60 | 0.0 | 0.03 | 17.74 | 0.00 | 2.151 | 15.41 | 0.00 | 8.9 | 91.1 | 0.0 | -0.51 | 0.47 | 0.71 | 0.76 | 2.56 | 7382 | 627 | 3 | 109 | 1 | 0 | 0 | logfile |
✔ | 8H1J | 34428 | 2023-09-28 | 2022-10-03 | 3.1 | 3.36 | 3.20 | 3.3 | 0.005 | 0.53 | 0.0 | 0.03 | 16.84 | 0.00 | 2.232 | 8.41 | 5.19 | 1.7 | 98.3 | 0.0 | 2.19 | 0.62 | 0.67 | 2.02 | 3.3 | 0.003 | 0.50 | 0.0 | 0.03 | 17.79 | 0.00 | 2.183 | 8.31 | 0.32 | 2.0 | 98.0 | 0.0 | 1.45 | 0.62 | 0.71 | 0.78 | 1.97 | 5773 | 362 | 5 | 134 | 1 | 0 | 0 | logfile |
✔ | 6PEK | 20327 | 2023-09-30 | 2019-06-20 | 4.2 | 4.25 | — | 4.2 | 0.005 | 0.73 | 0.0 | 0.03 | 13.79 | 0.00 | 1.913 | 4.42 | 0.00 | 0.8 | 99.2 | 0.0 | -2.47 | 0.70 | 0.74 | — | 4.2 | 0.003 | 0.74 | 0.0 | 0.04 | 14.87 | 0.00 | 1.129 | 14.37 | 0.00 | 3.0 | 97.0 | 0.0 | -0.34 | 0.99 | 0.71 | 0.77 | — | 11106 | 1405 | 11 | 0 | 13 | 0 | 0 | logfile |
✔ | 8CQR | 16799 | 2023-09-29 | 2023-03-07 | 3.8 | 4.35 | 3.84 | 4.2 | 0.002 | 0.43 | 0.0 | 0.03 | 11.30 | 0.00 | 2.374 | 4.02 | 0.00 | 4.0 | 96.0 | 0.0 | 0.53 | 0.43 | 0.64 | 1.08 | 4.2 | 0.003 | 0.59 | 0.0 | 0.04 | 14.87 | 0.00 | 2.256 | 14.83 | 0.58 | 4.5 | 95.5 | 0.0 | 1.38 | 1.56 | 0.45 | 0.67 | 0.47 | 9708 | 618 | 6 | 0 | 0 | 0 | 5010 | logfile |
✔ | 8SZB | 40907 | 2023-09-28 | 2023-05-29 | 3.07 | 3.36 | 3.01 | 3.5 | 0.003 | 0.51 | 0.0 | 0.03 | 16.92 | 0.00 | 2.154 | 9.22 | 0.37 | 1.5 | 98.5 | 0.0 | 2.06 | 0.49 | 0.73 | 0.50 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 17.63 | 0.00 | 2.065 | 8.54 | 0.00 | 1.8 | 98.2 | 0.0 | 4.01 | 0.70 | 0.51 | 0.79 | 1.65 | 4962 | 612 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 8E2H | 27836 | 2023-09-30 | 2022-08-15 | 2.3 | 2.41 | 2.27 | 2.4 | 0.003 | 0.60 | 0.0 | 0.03 | 15.28 | 0.00 | 1.980 | 6.85 | 0.52 | 1.1 | 98.9 | 0.0 | 1.61 | 0.65 | 0.82 | 4.36 | 2.4 | 0.004 | 0.58 | 0.0 | 0.04 | 16.12 | 0.00 | 1.971 | 7.33 | 2.78 | 0.8 | 99.2 | 0.0 | 2.63 | 0.93 | 0.65 | 0.83 | 4.00 | 10412 | 656 | 1 | 0 | 0 | 40 | 5280 | logfile |
✔ | 8EX9 | 28655 | 2023-09-27 | 2022-10-25 | 2.96 | 3.27 | 3.00 | 3.2 | 0.003 | 0.49 | 0.0 | 0.03 | 17.73 | 0.00 | 2.200 | 13.65 | 0.79 | 4.3 | 95.7 | 0.0 | -1.52 | 0.60 | 0.71 | 4.83 | 3.2 | 0.004 | 0.55 | 0.0 | 0.03 | 18.23 | 0.00 | 2.170 | 14.22 | 3.97 | 4.3 | 95.7 | 0.0 | -0.41 | 0.25 | 0.60 | 0.72 | 4.21 | 4199 | 166 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 8CXM | 27060 | 2023-09-28 | 2022-05-21 | 3.21 | 3.69 | 3.21 | 3.6 | 0.003 | 0.50 | 0.0 | 0.03 | 14.84 | 0.00 | 2.093 | 8.38 | 0.06 | 4.1 | 95.9 | 0.0 | 3.68 | 0.56 | 0.87 | 1.34 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 16.26 | 0.00 | 2.108 | 6.36 | 0.15 | 3.9 | 96.1 | 0.0 | 4.62 | 1.14 | 0.58 | 0.89 | 1.41 | 109560 | 14685 | 55 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SRM | 40735 | 2023-09-28 | 2023-05-05 | 4.46 | 5.07 | 4.47 | 4.4 | 0.003 | 0.51 | 0.0 | 0.03 | 4.38 | 0.00 | 2.233 | 4.32 | 0.00 | 4.0 | 96.0 | 0.0 | 2.57 | 0.82 | 0.84 | — | 4.3 | 0.006 | 0.64 | 0.0 | 0.04 | 5.47 | 0.00 | 2.070 | 5.40 | 0.00 | 7.2 | 92.8 | 0.0 | -0.25 | 1.59 | 0.83 | 0.86 | — | 5773 | 1163 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FZR | 29638 | 2023-09-28 | 2023-01-29 | 3.6 | 5.09 | 4.10 | 4.1 | 0.002 | 0.48 | 0.0 | 0.03 | 15.49 | 0.00 | 2.234 | 12.34 | 6.97 | 4.6 | 94.4 | 1.0 | -1.87 | 0.52 | 0.24 | 0.50 | 4.3 | 0.004 | 0.78 | 0.0 | 0.04 | 19.19 | 0.00 | 2.080 | 35.03 | 0.00 | 8.0 | 91.8 | 0.2 | -2.33 | 2.29 | 0.83 | 0.67 | 0.78 | 5711 | 503 | 3 | 77 | 1 | 0 | 0 | logfile |
✔ | 8SZA | 40905 | 2023-09-28 | 2023-05-29 | 2.75 | 3.32 | 2.81 | 3.4 | 0.003 | 0.65 | 0.0 | 0.03 | 14.83 | 0.00 | 2.185 | 8.19 | 0.98 | 0.3 | 99.7 | 0.0 | 2.12 | 0.50 | 0.78 | 1.28 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.68 | 0.00 | 2.280 | 8.99 | 2.16 | 0.7 | 99.3 | 0.0 | 2.68 | 0.49 | 0.50 | 0.78 | 1.33 | 4800 | 606 | 11 | 0 | 6 | 0 | 0 | logfile |
✔ | 7oDR | 12845 | 2023-09-27 | 2021-04-30 | 2.9 | 3.11 | — | 3.0 | 0.002 | 0.41 | 0.0 | 0.03 | 11.20 | 0.02 | 1.963 | 4.98 | 0.44 | 1.1 | 98.9 | 0.0 | 0.96 | 0.74 | 0.80 | 3.31 | 3.0 | 0.003 | 0.69 | 0.0 | 0.04 | 15.31 | 0.01 | 1.914 | 9.97 | 2.50 | 2.0 | 97.9 | 0.0 | 0.91 | 1.25 | 0.76 | 0.84 | 2.68 | 107464 | 9244 | 68 | 1489 | 135 | 0 | 0 | logfile |
✘ | 8BF8 | 16016 | 2023-09-27 | 2022-10-24 | 2.8 | 3.14 | 2.80 | 3.1 | 0.003 | 0.47 | 0.0 | 0.03 | 13.85 | 0.00 | 2.203 | 8.73 | 0.93 | 2.7 | 97.3 | 0.0 | 0.92 | 0.64 | 0.76 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4686 | 302 | 2 | 111 | 0 | 0 | 0 | logfile |