The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8TAU | 41142 | 2024-03-10 | 2023-06-27 | 3.5 | 3.03 | 3.36 | 1.8 | 0.006 | 0.79 | 0.0 | 0.00 | 7.52 | 0.01 | 2.188 | 4.55 | 0.00 | 2.1 | 97.9 | 0.0 | -2.34 | 0.73 | 0.66 | — | 2.3 | 0.003 | 0.67 | 0.0 | 0.00 | 4.65 | 0.00 | 2.053 | 9.28 | 0.00 | 11.9 | 88.1 | 0.0 | -2.02 | 0.69 | 0.78 | 0.73 | — | 54106 | 9002 | 25 | 0 | 4 | 0 | 18087 | logfile |
✔ | 6oG3 | 20051 | 2024-03-10 | 2019-04-01 | 4.1 | 5.37 | — | 6.5 | 0.005 | 1.53 | 0.0 | 0.00 | 0.93 | 0.00 | 2.539 | 0.00 | 0.00 | 0.0 | 99.2 | 0.8 | 0.27 | 0.46 | 0.48 | — | 6.0 | 0.005 | 1.11 | 0.0 | 0.00 | 8.01 | 0.00 | 2.615 | 51.00 | 0.00 | 13.0 | 87.0 | 0.0 | -1.64 | 2.16 | 0.67 | 0.87 | — | 1215 | 396 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 5VLZ | 8709 | 2024-03-20 | 2017-04-26 | 4.4 | 4.55 | — | 4.4 | 0.006 | 0.89 | 0.0 | 0.00 | 5.88 | 0.00 | 2.272 | 2.04 | 0.00 | 6.1 | 93.9 | 0.0 | -1.92 | 0.80 | 0.66 | — | 4.4 | 0.002 | 0.73 | 0.0 | 0.00 | 4.75 | 0.00 | 2.276 | 0.95 | 0.00 | 4.8 | 95.2 | 0.0 | -0.40 | 2.02 | 0.83 | 0.78 | — | 96897 | 24179 | 181 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKo | 25976 | 2024-03-18 | 2022-01-17 | 4.8 | 7.71 | 5.39 | 4.4 | 0.019 | 2.23 | 0.0 | 0.00 | 6.74 | 0.01 | 2.314 | 0.12 | 0.00 | 4.8 | 93.9 | 1.4 | -0.54 | 0.62 | 0.65 | — | 4.4 | 0.004 | 0.84 | 0.0 | 0.00 | 5.80 | 0.00 | 2.139 | 12.52 | 0.00 | 10.1 | 89.6 | 0.2 | -0.46 | 0.84 | 0.84 | 0.82 | — | 20229 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2024-03-16 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 22.50 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.01 | 0.0 | 0.05 | 28.52 | 0.01 | 1.951 | 72.85 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.98 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 7XSL | 33426 | 2024-03-15 | 2022-05-14 | 3.84 | 4.65 | 3.83 | 3.7 | 0.002 | 0.47 | 0.0 | 0.02 | 24.69 | 0.00 | 1.935 | 8.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.77 | — | 3.8 | 0.007 | 0.71 | 0.0 | 0.04 | 25.81 | 0.01 | 1.808 | 34.41 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.01 | 0.92 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7XSK | 33425 | 2024-03-15 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 24.66 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.007 | 0.69 | 0.0 | 0.04 | 25.95 | 0.01 | 1.746 | 31.76 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.93 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7YCH | 33739 | 2024-03-11 | 2022-07-01 | 3.09 | 4.46 | 3.30 | 3.5 | 0.002 | 0.48 | 0.0 | 0.02 | 24.19 | 0.00 | 1.420 | 15.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.92 | 0.84 | — | 3.6 | 0.007 | 0.67 | 0.0 | 0.04 | 24.32 | 0.00 | 1.812 | 30.74 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.94 | 0.88 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 8HD6 | 34670 | 2024-03-11 | 2022-11-03 | 3.73 | 4.52 | 3.73 | 3.2 | 0.002 | 0.54 | 0.0 | 0.02 | 23.56 | 0.00 | 1.969 | 2.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.78 | — | 3.3 | 0.008 | 0.89 | 0.0 | 0.05 | 25.51 | 0.01 | 1.715 | 29.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.18 | 0.91 | 0.83 | — | 8980 | 0 | 1 | 419 | 25 | 0 | 0 | logfile |
✔ | 7YCi | 33740 | 2024-03-11 | 2022-07-01 | 2.98 | 4.31 | 3.09 | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 24.35 | 0.00 | 1.521 | 15.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.84 | — | 3.3 | 0.005 | 0.62 | 0.0 | 0.04 | 24.57 | 0.00 | 1.865 | 23.49 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.95 | 0.90 | — | 8474 | 0 | 2 | 395 | 4 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2024-03-17 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 21.03 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.007 | 1.02 | 0.0 | 0.05 | 25.19 | 0.01 | 1.900 | 45.40 | 4.54 | 22.7 | 76.1 | 1.3 | -5.20 | 2.37 | 0.80 | 0.67 | 0.25 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 8E36 | 27858 | 2024-03-12 | 2022-08-16 | 2.38 | 3.00 | 2.65 | 2.8 | 0.006 | 0.56 | 0.0 | 0.02 | 23.67 | 0.02 | 1.934 | 2.28 | 0.32 | 4.2 | 95.8 | 0.0 | 1.12 | 0.72 | 0.90 | 4.41 | 2.8 | 0.007 | 0.61 | 0.0 | 0.04 | 23.48 | 0.01 | 1.921 | 3.94 | 1.59 | 5.2 | 94.8 | 0.1 | 0.10 | 0.86 | 0.69 | 0.89 | 4.84 | 115712 | 1179 | 11 | 3015 | 1 | 0 | 41809 | logfile |
✔ | 6UES | 20755 | 2024-03-10 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 26.31 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 27.66 | 0.01 | 1.797 | 37.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.86 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 6PCH | 20300 | 2024-03-16 | 2019-06-17 | 2.9 | 3.23 | — | 3.1 | 0.005 | 0.37 | 0.0 | 0.02 | 23.63 | 0.02 | 1.702 | 3.90 | 2.23 | 7.9 | 92.0 | 0.1 | -4.23 | 0.61 | 0.79 | 3.30 | 3.1 | 0.004 | 0.65 | 0.0 | 0.03 | 23.94 | 0.01 | 2.032 | 11.26 | 3.94 | 8.7 | 91.2 | 0.1 | -2.16 | 0.51 | 0.63 | 0.82 | 1.90 | 72134 | 964 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6WYV | 21969 | 2024-03-16 | 2020-05-13 | 2.75 | 3.18 | — | 3.0 | 0.006 | 0.48 | 1.0 | 0.02 | 23.73 | 0.02 | 1.925 | 3.89 | 1.57 | 7.1 | 92.8 | 0.1 | -4.66 | 0.70 | 0.84 | 3.35 | 3.0 | 0.005 | 0.67 | 1.0 | 0.03 | 23.92 | 0.01 | 2.012 | 11.06 | 6.16 | 8.3 | 91.6 | 0.1 | -1.86 | 1.52 | 0.71 | 0.88 | 3.09 | 72194 | 971 | 9 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6PC5 | 20296 | 2024-03-16 | 2019-06-16 | 2.7 | 3.05 | — | 2.9 | 0.006 | 0.44 | 1.0 | 0.02 | 23.60 | 0.02 | 1.965 | 2.72 | 1.57 | 6.1 | 93.8 | 0.1 | -3.49 | 0.73 | 0.88 | 5.14 | 2.9 | 0.005 | 0.64 | 1.0 | 0.03 | 23.69 | 0.01 | 2.063 | 7.48 | 4.33 | 6.1 | 93.7 | 0.2 | -1.09 | 1.24 | 0.74 | 0.91 | 4.40 | 72206 | 971 | 9 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6PCS | 20306 | 2024-03-16 | 2019-06-18 | 2.8 | 3.17 | — | 3.0 | 0.005 | 0.38 | 0.0 | 0.02 | 23.64 | 0.02 | 1.658 | 3.31 | 1.31 | 5.7 | 94.1 | 0.1 | -3.87 | 0.66 | 0.86 | 3.98 | 3.0 | 0.006 | 0.69 | 0.0 | 0.04 | 23.68 | 0.01 | 1.981 | 8.45 | 4.71 | 7.5 | 92.2 | 0.3 | -1.47 | 1.27 | 0.67 | 0.89 | 3.48 | 72169 | 967 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6PCQ | 20304 | 2024-03-16 | 2019-06-18 | 2.6 | 3.06 | — | 2.9 | 0.008 | 0.44 | 0.0 | 0.02 | 23.64 | 0.02 | 1.976 | 3.10 | 1.84 | 6.8 | 93.2 | 0.0 | -4.00 | 0.66 | 0.84 | 4.35 | 2.9 | 0.005 | 0.66 | 0.0 | 0.04 | 23.77 | 0.01 | 2.121 | 9.19 | 3.82 | 7.0 | 92.7 | 0.2 | -1.56 | 1.73 | 0.66 | 0.86 | 4.23 | 72125 | 963 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7YC8 | 33736 | 2024-03-11 | 2022-07-01 | 4.14 | 7.25 | 4.31 | 4.1 | 0.002 | 0.51 | 0.0 | 0.02 | 25.12 | 0.00 | 2.079 | 18.05 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.96 | 0.87 | — | 4.1 | 0.006 | 0.81 | 0.0 | 0.04 | 27.57 | 0.01 | 1.977 | 68.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.24 | 0.97 | 0.89 | — | 8335 | 0 | 1 | 388 | 1 | 0 | 0 | logfile |
✔ | 5A8L | 3099 | 2024-03-15 | 2015-07-16 | 3.8 | 3.60 | — | 3.5 | 0.004 | 0.67 | 0.0 | 0.02 | 21.13 | 0.00 | 1.435 | 8.96 | 0.95 | 10.3 | 86.8 | 2.9 | -2.06 | 0.18 | 0.43 | 0.47 | 3.5 | 0.005 | 0.85 | 0.0 | 0.04 | 23.10 | 0.01 | 2.082 | 20.16 | 3.98 | 11.9 | 87.3 | 0.8 | -2.35 | 1.86 | 0.23 | 0.63 | 0.31 | 12264 | 624 | 9 | 347 | 0 | 0 | 0 | logfile |