The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7XQG | 33395 | 2024-03-15 | 2022-05-07 | 3.8 | 4.58 | 3.85 | 4.2 | 0.002 | 0.46 | 0.0 | 0.03 | 12.11 | 0.00 | 2.268 | 4.64 | 5.00 | 1.5 | 98.0 | 0.5 | 2.98 | 0.79 | 0.85 | 2.01 | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 14.99 | 0.00 | 2.292 | 8.46 | 3.15 | 3.2 | 96.8 | 0.0 | 2.44 | 0.73 | 0.79 | 0.85 | 1.25 | 10206 | 1206 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 6K3o | 9910 | 2024-03-21 | 2019-05-21 | 3.4 | 3.86 | — | 3.8 | 0.003 | 0.56 | 0.0 | 0.03 | 14.46 | 0.00 | 1.077 | 16.09 | 0.00 | 3.8 | 96.2 | 0.0 | -1.52 | 0.79 | 0.82 | 3.15 | 3.8 | 0.004 | 0.66 | 0.0 | 0.03 | 17.26 | 0.00 | 1.626 | 6.59 | 4.43 | 2.2 | 97.8 | 0.0 | 4.00 | 0.48 | 0.77 | 0.82 | 2.32 | 31508 | 3790 | 48 | 0 | 36 | 0 | 0 | logfile |
✔ | 8EXA | 28656 | 2024-03-10 | 2022-10-25 | 3.14 | 3.45 | 3.09 | 3.4 | 0.004 | 0.54 | 0.0 | 0.03 | 22.74 | 0.00 | 2.223 | 15.79 | 0.40 | 3.6 | 96.4 | 0.0 | 0.27 | 0.61 | 0.69 | 4.07 | 3.4 | 0.003 | 0.49 | 0.0 | 0.03 | 22.62 | 0.00 | 2.172 | 15.58 | 3.64 | 3.6 | 96.4 | 0.0 | 0.43 | 1.14 | 0.60 | 0.68 | 3.89 | 5539 | 341 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 8CVi | 27008 | 2024-03-13 | 2022-05-18 | 3.4 | 3.54 | 3.20 | 3.4 | 0.003 | 0.49 | 0.0 | 0.03 | 13.53 | 0.00 | 2.073 | 8.79 | 0.05 | 4.0 | 95.9 | 0.1 | 1.49 | 0.55 | 0.83 | 1.22 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 16.35 | 0.00 | 2.089 | 10.90 | 1.79 | 4.0 | 96.0 | 0.0 | 3.61 | 2.20 | 0.58 | 0.85 | 0.95 | 66030 | 8856 | 33 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V3A | 21031 | 2024-03-20 | 2019-11-25 | 2.82 | 3.02 | — | 3.0 | 0.002 | 0.51 | 0.0 | 0.03 | 22.75 | 0.02 | 1.898 | 5.96 | 0.07 | 2.8 | 97.2 | 0.1 | -1.23 | 0.82 | 0.82 | 2.96 | 3.0 | 0.006 | 0.69 | 0.0 | 0.04 | 22.98 | 0.01 | 1.658 | 6.97 | 2.86 | 4.8 | 95.2 | 0.1 | -0.01 | 1.13 | 0.84 | 0.88 | 3.00 | 142113 | 5457 | 74 | 4615 | 95 | 520 | 0 | logfile |
✔ | 7MVV | 24057 | 2024-03-19 | 2021-05-15 | 3.22 | 4.20 | 3.24 | 3.5 | 0.002 | 0.36 | 0.0 | 0.03 | 6.43 | 0.00 | 2.161 | 3.07 | 0.07 | 1.3 | 98.7 | 0.0 | -0.66 | 0.88 | 0.76 | 0.50 | 3.5 | 0.002 | 0.50 | 0.0 | 0.03 | 10.83 | 0.00 | 2.039 | 6.48 | 0.43 | 2.7 | 97.3 | 0.0 | 3.22 | 0.92 | 0.89 | 0.81 | 1.07 | 25764 | 1609 | 4 | 0 | 0 | 0 | 12907 | logfile |
✔ | 7Sii | 25142 | 2024-03-18 | 2021-10-14 | 3.45 | 3.63 | — | 3.6 | 0.008 | 0.74 | 0.0 | 0.03 | 13.75 | 0.00 | 2.220 | 5.25 | 2.21 | 2.9 | 97.1 | 0.0 | 2.94 | 0.64 | 0.79 | 2.61 | 3.6 | 0.004 | 0.53 | 0.0 | 0.03 | 15.14 | 0.00 | 2.112 | 7.34 | 1.75 | 3.1 | 96.9 | 0.0 | 2.66 | 0.49 | 0.66 | 0.83 | 1.87 | 20484 | 1286 | 8 | 0 | 4 | 0 | 10184 | logfile |
✔ | 7XD4 | 33135 | 2024-03-14 | 2022-03-26 | 3.89 | 4.13 | — | 3.8 | 0.003 | 0.59 | 0.0 | 0.03 | 23.99 | 0.00 | 1.880 | 1.73 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.73 | — | 3.8 | 0.007 | 0.79 | 0.0 | 0.04 | 24.47 | 0.01 | 1.750 | 17.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.80 | 0.87 | 0.78 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7N0K | 24107 | 2024-03-10 | 2021-05-25 | 3.5 | 4.16 | — | 4.1 | 0.003 | 0.56 | 0.0 | 0.03 | 18.36 | 0.00 | 2.238 | 8.16 | 7.46 | 1.0 | 99.0 | 0.0 | -2.20 | 0.63 | 0.77 | 1.65 | 4.1 | 0.003 | 0.62 | 0.0 | 0.03 | 19.01 | 0.00 | 2.285 | 8.26 | 4.48 | 2.0 | 98.0 | 0.0 | 3.48 | 0.69 | 0.60 | 0.75 | 0.96 | 5154 | 626 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EZ2 | 31386 | 2024-03-11 | 2021-06-01 | 3.05 | 2.80 | — | 3.0 | 0.005 | 0.56 | 0.0 | 0.03 | 23.37 | 0.00 | 1.809 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.69 | 0.81 | — | 3.0 | 0.008 | 0.87 | 0.0 | 0.05 | 23.77 | 0.01 | 1.758 | 7.51 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.04 | 0.73 | 0.89 | — | 8698 | 0 | 3 | 406 | 31 | 0 | 0 | logfile |
✔ | 8E4o | 27894 | 2024-03-10 | 2022-08-18 | 3.43 | 3.87 | 3.39 | 3.6 | 0.002 | 0.44 | 0.0 | 0.03 | 11.67 | 0.01 | 2.257 | 5.45 | 0.45 | 1.8 | 98.2 | 0.0 | 2.99 | 0.68 | 0.73 | 2.38 | 3.6 | 0.003 | 0.67 | 0.0 | 0.03 | 13.48 | 0.00 | 2.030 | 7.37 | 1.27 | 2.6 | 97.4 | 0.0 | 2.79 | 0.71 | 0.72 | 0.80 | 1.76 | 53496 | 3588 | 8 | 0 | 4 | 0 | 26024 | logfile |
✔ | 7BL5 | 12218 | 2024-03-20 | 2021-01-18 | 3.3 | 3.74 | — | 3.5 | 0.002 | 0.45 | 0.0 | 0.03 | 22.80 | 0.00 | 2.029 | 11.79 | 0.11 | 5.7 | 94.3 | 0.0 | -1.05 | 0.75 | 0.79 | 1.02 | 3.5 | 0.004 | 0.65 | 1.0 | 0.04 | 23.16 | 0.00 | 1.908 | 18.82 | 4.72 | 8.3 | 91.7 | 0.0 | -1.76 | 0.61 | 0.76 | 0.83 | 1.12 | 98927 | 4348 | 46 | 3033 | 3 | 27 | 0 | logfile |
✔ | 7BL3 | 12216 | 2024-03-19 | 2021-01-18 | 3.5 | 3.69 | — | 3.5 | 0.002 | 0.48 | 0.0 | 0.03 | 23.02 | 0.00 | 2.089 | 12.43 | 0.03 | 6.4 | 93.6 | 0.0 | -1.33 | 0.75 | 0.79 | 1.02 | 3.5 | 0.004 | 0.60 | 0.0 | 0.03 | 23.12 | 0.00 | 2.004 | 15.86 | 4.38 | 8.3 | 91.7 | 0.0 | -1.48 | 0.57 | 0.75 | 0.82 | 1.09 | 92831 | 3612 | 39 | 3021 | 2 | 27 | 0 | logfile |
✔ | 7M4Y | 23670 | 2024-03-19 | 2021-03-22 | 2.5 | 1.72 | — | 1.5 | 0.006 | 0.58 | 2.0 | 0.03 | 23.65 | 0.02 | 1.783 | 3.47 | 2.14 | 2.5 | 97.3 | 0.2 | 1.41 | 0.77 | 0.73 | 3.74 | 1.5 | 0.006 | 0.85 | 0.0 | 0.05 | 23.37 | 0.01 | 1.626 | 4.89 | 3.66 | 3.3 | 96.6 | 0.1 | 0.24 | 0.31 | 0.79 | 0.76 | 3.88 | 139817 | 5511 | 80 | 4453 | 200 | 1044 | 0 | logfile |
✔ | 6T9L | 10415 | 2024-03-17 | 2019-10-28 | 3.6 | 3.74 | 3.53 | 3.6 | 0.002 | 0.47 | 0.0 | 0.03 | 22.57 | 0.00 | 2.136 | 7.11 | 0.07 | 1.1 | 98.9 | 0.0 | -1.63 | 0.74 | 0.68 | 0.82 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 24.75 | 0.00 | 2.004 | 8.80 | 3.13 | 2.9 | 97.1 | 0.0 | 1.11 | 0.80 | 0.84 | 0.84 | 1.20 | 18157 | 1532 | 18 | 290 | 8 | 0 | 0 | logfile |
✔ | 6GC4 | 4380 | 2024-03-17 | 2018-04-17 | 4.3 | 4.54 | — | 4.3 | 0.003 | 0.77 | 0.0 | 0.03 | 22.72 | 0.01 | 2.252 | 4.11 | 0.39 | 6.9 | 92.9 | 0.2 | -3.77 | 0.70 | 0.60 | — | 4.3 | 0.007 | 0.82 | 0.0 | 0.04 | 23.39 | 0.01 | 1.985 | 27.69 | 0.04 | 11.8 | 88.0 | 0.1 | -2.89 | 1.04 | 0.81 | 0.79 | — | 80165 | 2836 | 26 | 2705 | 0 | 0 | 0 | logfile |
✔ | 6GC7 | 4382 | 2024-03-10 | 2018-04-17 | 4.3 | 4.85 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.03 | 22.57 | 0.00 | 2.251 | 5.08 | 0.28 | 5.9 | 93.9 | 0.1 | -4.27 | 0.76 | 0.61 | — | 4.4 | 0.008 | 0.75 | 0.0 | 0.04 | 23.50 | 0.01 | 1.960 | 31.37 | 0.00 | 10.4 | 89.4 | 0.2 | -2.53 | 1.69 | 0.91 | 0.87 | — | 54410 | 1738 | 17 | 1901 | 0 | 0 | 0 | logfile |
✔ | 6NTS | 0510 | 2024-03-14 | 2019-01-30 | 3.63 | 4.31 | 2.98 | 3.6 | 0.016 | 0.51 | 0.0 | 0.03 | 13.24 | 0.00 | 1.917 | 2.06 | 0.00 | 3.8 | 96.2 | 0.0 | -2.08 | 0.89 | 0.77 | 0.59 | 3.7 | 0.002 | 0.64 | 0.0 | 0.04 | 15.06 | 0.00 | 2.088 | 8.13 | 0.72 | 2.8 | 97.2 | 0.0 | 0.80 | 2.30 | 0.92 | 0.85 | 1.08 | 9956 | 1240 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 6V39 | 21030 | 2024-03-20 | 2019-11-25 | 3.04 | 3.20 | — | 3.1 | 0.002 | 0.49 | 0.0 | 0.03 | 22.89 | 0.02 | 1.895 | 6.19 | 0.00 | 2.5 | 97.4 | 0.1 | -1.02 | 0.86 | 0.85 | 2.53 | 3.1 | 0.006 | 0.76 | 3.0 | 0.04 | 23.13 | 0.01 | 1.723 | 9.27 | 4.28 | 4.7 | 95.3 | 0.1 | -0.16 | 1.17 | 0.87 | 0.88 | 2.82 | 141897 | 5458 | 70 | 4615 | 116 | 273 | 0 | logfile |
✔ | 7QEY | 13944 | 2024-03-14 | 2021-12-03 | 2.0 | 2.46 | — | 2.2 | 0.005 | 0.85 | 0.0 | 0.03 | 10.53 | 0.00 | 2.199 | 3.57 | 2.35 | 1.7 | 98.3 | 0.0 | 1.74 | 0.77 | 0.90 | 5.27 | 2.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.32 | 0.00 | 2.154 | 4.43 | 2.66 | 2.4 | 97.6 | 0.0 | 2.99 | 0.55 | 0.78 | 0.93 | 4.39 | 9467 | 1092 | 18 | 0 | 30 | 281 | 0 | logfile |