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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QJY | 14026 | 2022-05-12 | 2021-12-17 | 3.14 | 2.93 | 3.08 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.32 | 0.01 | 2.519 | 0.00 | 0.25 | 5.7 | 94.3 | 0.0 | -2.50 | 0.38 | 0.82 | 5.27 | 3.1 | 0.008 | 0.87 | 0.0 | 0.05 | 17.16 | 0.01 | 2.116 | 9.11 | 1.26 | 3.4 | 96.6 | 0.0 | -2.45 | 3.42 | 0.36 | 0.84 | 4.60 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKG | 14041 | 2022-05-12 | 2021-12-17 | 3.36 | 3.19 | 3.09 | 3.4 | 0.010 | 2.03 | 0.0 | 0.10 | 10.76 | 0.01 | 2.528 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.98 | 0.38 | 0.80 | 4.23 | 3.5 | 0.003 | 0.60 | 0.0 | 0.05 | 13.51 | 0.00 | 2.262 | 5.27 | 0.00 | 2.6 | 97.4 | 0.0 | -1.55 | 1.17 | 0.36 | 0.83 | 4.87 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7NCH | 12266 | 2022-05-13 | 2021-01-28 | 3.84 | 3.76 | 3.69 | 3.8 | 0.013 | 1.61 | 2.0 | 0.10 | 14.68 | 0.00 | 2.485 | 0.00 | 0.19 | 9.4 | 90.6 | 0.0 | -3.70 | 0.60 | 0.45 | 2.36 | 3.8 | 0.003 | 0.65 | 2.0 | 0.05 | 15.39 | 0.00 | 2.034 | 7.72 | 0.19 | 10.3 | 89.7 | 0.0 | -3.84 | 1.65 | 0.64 | 0.52 | 2.46 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 7QK3 | 14030 | 2022-05-12 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.73 | 0.0 | 0.05 | 16.22 | 0.00 | 2.309 | 3.65 | 1.28 | 4.0 | 96.0 | 0.0 | -2.83 | 1.47 | 0.40 | 0.82 | 5.18 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 5U1D | 8482 | 2022-05-12 | 2016-11-28 | 3.97 | 4.06 | — | 4.3 | 0.007 | 1.17 | 0.0 | 0.05 | 12.05 | 0.00 | 2.452 | 0.07 | 0.84 | 5.7 | 94.1 | 0.2 | -2.16 | 0.36 | 0.48 | 1.30 | 4.3 | 0.004 | 0.78 | 0.0 | 0.04 | 15.92 | 0.00 | 1.985 | 14.80 | 0.51 | 4.8 | 95.1 | 0.1 | 0.73 | 1.31 | 0.52 | 0.75 | 1.33 | 7815 | 1168 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TK8 | 25960 | 2022-05-14 | 2022-01-17 | 4.7 | 7.79 | 12.86 | 4.4 | 0.019 | 2.21 | 0.0 | 0.00 | 6.68 | 0.01 | 2.390 | 0.08 | 0.00 | 4.1 | 94.4 | 1.5 | -0.46 | 0.60 | 0.61 | — | 4.4 | 0.008 | 1.17 | 0.0 | 0.00 | 6.80 | 0.01 | 1.933 | 31.40 | 0.00 | 11.8 | 87.8 | 0.4 | -1.32 | 1.58 | 0.81 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TK0 | 25948 | 2022-05-14 | 2022-01-17 | 4.4 | 6.63 | 4.39 | 4.1 | 0.019 | 2.21 | 0.0 | 0.00 | 6.55 | 0.01 | 2.394 | 0.08 | 0.00 | 3.9 | 94.5 | 1.5 | -0.40 | 0.58 | 0.62 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.00 | 5.40 | 0.00 | 2.153 | 9.44 | 0.00 | 10.9 | 88.8 | 0.3 | -0.57 | 0.81 | 0.83 | 0.81 | — | 20220 | 5054 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N95 | 24250 | 2022-05-12 | 2021-06-16 | 4.1 | 3.45 | — | 2.1 | 0.002 | 0.74 | 0.0 | 0.00 | 5.05 | 0.00 | 2.573 | 0.10 | 0.00 | 7.1 | 92.3 | 0.6 | -1.14 | 0.78 | 0.70 | — | 2.1 | 0.003 | 0.89 | 0.0 | 0.00 | 3.97 | 0.00 | 2.552 | 3.52 | 0.00 | 14.4 | 85.4 | 0.2 | -2.79 | 1.72 | 0.84 | 0.81 | — | 7299 | 2433 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ADM | 11731 | 2022-05-13 | 2020-09-15 | 3.5 | 3.77 | 3.57 | 3.8 | 0.013 | 1.98 | 3.0 | 0.11 | 15.37 | 0.02 | 2.582 | 0.10 | 0.73 | 11.9 | 88.1 | 0.0 | -2.91 | 0.49 | 0.70 | 2.46 | 3.8 | 0.018 | 1.28 | 1.0 | 0.04 | 16.62 | 0.00 | 2.082 | 11.00 | 0.37 | 9.3 | 90.7 | 0.0 | -2.11 | 1.82 | 0.49 | 0.70 | 2.23 | 9726 | 614 | 1 | 0 | 0 | 0 | 4799 | logfile |
✔ | 7TPA | 26050 | 2022-05-15 | 2022-01-25 | 3.6 | 3.99 | — | 3.6 | 0.013 | 1.74 | 3.0 | 0.09 | 12.83 | 0.01 | 2.510 | 0.11 | 1.11 | 6.5 | 92.8 | 0.8 | -1.19 | 0.84 | 0.85 | 2.96 | 3.6 | 0.004 | 0.61 | 0.0 | 0.04 | 13.28 | 0.00 | 2.074 | 4.65 | 0.21 | 4.6 | 95.2 | 0.2 | 0.36 | 0.46 | 0.84 | 0.85 | 2.47 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 6ZHY | 11221 | 2022-05-14 | 2020-06-24 | 3.0 | 3.57 | 2.97 | 3.1 | 0.015 | 2.05 | 3.0 | 0.10 | 28.04 | 0.03 | 2.586 | 0.12 | 0.65 | 1.7 | 98.3 | 0.0 | -1.41 | 0.86 | 0.80 | 4.90 | 3.1 | 0.004 | 0.65 | 0.0 | 0.04 | 28.81 | 0.01 | 1.921 | 4.71 | 1.94 | 2.4 | 97.6 | 0.0 | 2.94 | 0.90 | 0.88 | 0.87 | 3.47 | 16127 | 557 | 9 | 220 | 0 | 0 | 7172 | logfile |
✔ | 7KDT | 22829 | 2022-05-12 | 2020-10-09 | 3.05 | 3.34 | 3.19 | 3.4 | 0.012 | 1.74 | 0.0 | 0.09 | 14.56 | 0.02 | 2.562 | 0.12 | 0.47 | 1.4 | 98.6 | 0.0 | -1.64 | 0.70 | 0.77 | 2.95 | 3.3 | 0.002 | 0.51 | 0.0 | 0.03 | 17.10 | 0.00 | 2.221 | 6.08 | 0.00 | 1.8 | 98.2 | 0.0 | 3.06 | 2.82 | 0.68 | 0.79 | 2.35 | 8064 | 505 | 2 | 0 | 0 | 0 | 4042 | logfile |
✔ | 7TJY | 25946 | 2022-05-14 | 2022-01-17 | 3.8 | 4.84 | 3.78 | 3.6 | 0.020 | 2.29 | 0.0 | 0.00 | 6.75 | 0.01 | 2.333 | 0.12 | 0.00 | 4.3 | 94.3 | 1.5 | -0.54 | 0.59 | 0.68 | — | 3.7 | 0.006 | 0.89 | 0.0 | 0.00 | 5.53 | 0.00 | 2.131 | 6.70 | 0.00 | 11.9 | 87.8 | 0.3 | -0.26 | 1.48 | 0.84 | 0.80 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TP9 | 26049 | 2022-05-15 | 2022-01-25 | 3.48 | 3.86 | — | 3.5 | 0.013 | 1.76 | 6.0 | 0.09 | 12.66 | 0.01 | 2.518 | 0.13 | 0.94 | 6.9 | 92.4 | 0.7 | -0.96 | 0.84 | 0.84 | 3.41 | 3.5 | 0.004 | 0.63 | 0.0 | 0.04 | 13.46 | 0.00 | 2.021 | 5.71 | 0.13 | 5.8 | 94.1 | 0.1 | 0.17 | 0.49 | 0.85 | 0.86 | 2.70 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7SCZ | 25043 | 2022-05-15 | 2021-09-29 | 3.5 | 4.01 | 3.49 | 3.8 | 0.014 | 1.91 | 1.0 | 0.09 | 27.47 | 0.03 | 2.529 | 0.13 | 0.00 | 1.7 | 98.3 | 0.0 | 0.09 | 0.80 | 0.77 | 2.51 | 3.8 | 0.005 | 0.64 | 0.0 | 0.04 | 27.86 | 0.00 | 1.978 | 6.73 | 0.28 | 2.3 | 97.7 | 0.0 | 2.83 | 1.42 | 0.79 | 0.80 | 1.56 | 23205 | 850 | 11 | 294 | 0 | 0 | 10435 | logfile |
✔ | 7TPF | 26053 | 2022-05-15 | 2022-01-25 | 3.4 | 3.74 | — | 3.4 | 0.013 | 1.75 | 3.0 | 0.09 | 12.67 | 0.01 | 2.518 | 0.13 | 0.72 | 6.1 | 93.5 | 0.3 | -0.86 | 0.84 | 0.86 | 3.82 | 3.4 | 0.008 | 0.91 | 0.0 | 0.04 | 13.36 | 0.00 | 2.163 | 4.61 | 0.04 | 4.0 | 95.9 | 0.1 | 0.37 | 0.44 | 0.85 | 0.87 | 3.19 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7QK1 | 14028 | 2022-05-12 | 2021-12-17 | 3.03 | 3.20 | 2.13 | 3.2 | 0.011 | 1.97 | 2.0 | 0.11 | 12.98 | 0.01 | 2.502 | 0.14 | 0.00 | 5.5 | 94.5 | 0.0 | -1.61 | 0.48 | 0.84 | 4.10 | 3.2 | 0.006 | 0.81 | 0.0 | 0.05 | 16.34 | 0.00 | 2.070 | 6.83 | 1.01 | 4.1 | 95.9 | 0.0 | -1.96 | 3.39 | 0.42 | 0.84 | 4.26 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M71 | 23707 | 2022-05-12 | 2021-03-26 | 2.66 | 3.67 | 2.73 | 3.0 | 0.013 | 1.86 | 5.0 | 0.11 | 13.04 | 0.02 | 2.531 | 0.15 | 0.41 | 5.0 | 95.0 | 0.0 | -0.93 | 0.52 | 0.79 | 3.87 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 13.71 | 0.00 | 2.162 | 7.58 | 0.82 | 3.4 | 96.6 | 0.0 | -0.43 | 1.35 | 0.59 | 0.90 | 3.76 | 6646 | 852 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7THE | 25893 | 2022-05-12 | 2022-01-10 | 3.79 | 4.06 | 3.94 | 4.0 | 0.013 | 1.88 | 0.0 | 0.11 | 13.70 | 0.02 | 2.548 | 0.15 | 0.00 | 8.2 | 91.8 | 0.0 | -2.01 | 0.67 | 0.75 | 3.24 | 4.0 | 0.004 | 0.79 | 0.0 | 0.05 | 16.02 | 0.00 | 2.183 | 17.28 | 0.83 | 7.0 | 93.0 | 0.0 | -1.23 | 0.72 | 0.68 | 0.75 | 2.31 | 3305 | 423 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7N5F | 24188 | 2022-05-12 | 2021-06-05 | 2.7 | 2.27 | 2.74 | 2.0 | 0.023 | 1.50 | 0.0 | 0.10 | 9.99 | 0.01 | 2.468 | 0.16 | 0.00 | 1.3 | 98.7 | 0.0 | 1.68 | 0.36 | 0.75 | 3.32 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 17.43 | 0.00 | 2.324 | 7.74 | 0.95 | 1.3 | 98.7 | 0.0 | 2.60 | 0.79 | 0.35 | 0.77 | 3.26 | 3037 | 386 | 1 | 0 | 1 | 0 | 0 | logfile |