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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LWP | 23553 | 2023-04-26 | 2021-03-01 | 3.01 | 3.22 | — | 3.2 | 0.013 | 1.80 | 8.0 | 0.10 | 13.67 | 0.01 | 2.498 | 0.06 | 1.14 | 5.6 | 93.9 | 0.5 | -1.08 | 0.74 | 0.81 | 3.01 | 3.2 | 0.005 | 0.66 | 0.0 | 0.05 | 14.76 | 0.00 | 2.162 | 5.29 | 0.28 | 4.5 | 95.5 | 0.0 | 0.25 | 1.23 | 0.73 | 0.84 | 2.73 | 23499 | 2982 | 6 | 0 | 31 | 0 | 0 | logfile |
✔ | 5U1D | 8482 | 2023-04-20 | 2016-11-28 | 3.97 | 4.06 | — | 4.3 | 0.007 | 1.17 | 0.0 | 0.05 | 12.05 | 0.00 | 2.452 | 0.07 | 0.84 | 5.7 | 94.1 | 0.2 | -2.16 | 0.36 | 0.48 | 1.30 | 4.1 | 0.004 | 0.78 | 0.0 | 0.04 | 15.89 | 0.00 | 2.058 | 14.10 | 0.51 | 4.7 | 95.2 | 0.1 | 0.93 | 1.07 | 0.52 | 0.75 | 1.63 | 7815 | 1168 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TLD | 25988 | 2023-04-26 | 2022-01-18 | 2.89 | 3.35 | — | 3.3 | 0.013 | 1.80 | 0.0 | 0.09 | 13.31 | 0.01 | 2.524 | 0.07 | 0.94 | 5.2 | 94.6 | 0.2 | -1.25 | 0.33 | 0.48 | 3.75 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.32 | 0.00 | 2.161 | 5.99 | 1.33 | 3.4 | 96.6 | 0.0 | 0.25 | 0.62 | 0.59 | 0.77 | 3.01 | 22812 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TP8 | 26048 | 2023-04-26 | 2022-01-25 | 3.4 | 3.77 | — | 3.4 | 0.013 | 1.76 | 6.0 | 0.10 | 13.10 | 0.01 | 2.519 | 0.07 | 0.98 | 6.3 | 92.8 | 0.9 | -0.98 | 0.84 | 0.85 | 4.23 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 13.65 | 0.00 | 2.237 | 3.83 | 0.04 | 4.5 | 95.4 | 0.1 | 0.36 | 1.61 | 0.85 | 0.86 | 2.93 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7LWi | 23546 | 2023-04-26 | 2021-03-01 | 3.07 | 3.28 | — | 3.2 | 0.013 | 1.78 | 1.0 | 0.10 | 13.36 | 0.01 | 2.478 | 0.08 | 1.07 | 5.3 | 94.4 | 0.2 | -1.20 | 0.73 | 0.79 | 3.51 | 3.2 | 0.004 | 0.65 | 0.0 | 0.05 | 15.04 | 0.00 | 2.144 | 7.34 | 0.27 | 4.1 | 95.9 | 0.0 | -0.02 | 0.68 | 0.73 | 0.80 | 2.62 | 23847 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7TKQ | 25978 | 2023-04-25 | 2022-01-17 | 4.5 | 7.57 | 4.53 | 4.3 | 0.019 | 2.21 | 0.0 | 0.00 | 6.72 | 0.01 | 2.371 | 0.08 | 0.00 | 4.0 | 94.5 | 1.5 | -0.48 | 0.59 | 0.61 | — | 4.3 | 0.009 | 1.21 | 0.0 | 0.00 | 7.52 | 0.01 | 1.933 | 34.86 | 0.00 | 13.6 | 85.9 | 0.5 | -2.21 | 0.83 | 0.82 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M71 | 23707 | 2023-04-20 | 2021-03-26 | 2.66 | 3.67 | 2.73 | 3.0 | 0.013 | 1.86 | 5.0 | 0.11 | 13.09 | 0.02 | 2.531 | 0.08 | 0.41 | 5.0 | 95.0 | 0.0 | -0.93 | 0.52 | 0.79 | 3.87 | 3.0 | 0.002 | 0.62 | 0.0 | 0.04 | 13.69 | 0.00 | 2.167 | 7.04 | 0.82 | 3.0 | 97.0 | 0.0 | -0.16 | 1.34 | 0.59 | 0.90 | 3.77 | 6646 | 852 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7TK8 | 25960 | 2023-04-25 | 2022-01-17 | 4.7 | 7.79 | 12.86 | 4.4 | 0.019 | 2.21 | 0.0 | 0.00 | 6.68 | 0.01 | 2.390 | 0.08 | 0.00 | 4.1 | 94.4 | 1.5 | -0.46 | 0.60 | 0.61 | — | 4.4 | 0.007 | 1.06 | 0.0 | 0.00 | 6.46 | 0.01 | 1.965 | 24.73 | 0.00 | 11.5 | 88.2 | 0.3 | -0.96 | 1.58 | 0.81 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TK0 | 25948 | 2023-04-25 | 2022-01-17 | 4.4 | 6.63 | 4.39 | 4.1 | 0.019 | 2.21 | 0.0 | 0.00 | 6.55 | 0.01 | 2.394 | 0.08 | 0.00 | 3.9 | 94.5 | 1.5 | -0.40 | 0.58 | 0.62 | — | 4.1 | 0.003 | 0.80 | 0.0 | 0.00 | 5.24 | 0.00 | 2.105 | 7.94 | 0.00 | 8.9 | 90.9 | 0.3 | -0.45 | 0.81 | 0.83 | 0.81 | — | 20220 | 5054 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKG | 25968 | 2023-04-25 | 2022-01-17 | 4.5 | 7.60 | 4.79 | 4.2 | 0.019 | 2.20 | 0.0 | 0.00 | 6.95 | 0.01 | 2.361 | 0.08 | 0.00 | 4.3 | 94.2 | 1.5 | -0.60 | 0.58 | 0.61 | — | 4.3 | 0.007 | 1.14 | 0.0 | 0.00 | 7.61 | 0.01 | 2.015 | 33.28 | 0.00 | 19.7 | 80.0 | 0.3 | -3.26 | 2.09 | 0.77 | 0.80 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ToY | 26041 | 2023-04-27 | 2022-01-24 | 3.53 | 3.95 | — | 3.5 | 0.014 | 1.77 | 4.0 | 0.10 | 13.68 | 0.01 | 2.517 | 0.08 | 1.50 | 6.8 | 92.8 | 0.4 | -1.10 | 0.85 | 0.84 | 2.97 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 14.23 | 0.00 | 2.190 | 5.85 | 0.26 | 4.3 | 95.6 | 0.1 | 0.35 | 0.49 | 0.85 | 0.85 | 2.13 | 24673 | 3049 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7TKH | 25969 | 2023-04-25 | 2022-01-17 | 4.4 | 7.29 | 4.45 | 4.2 | 0.019 | 2.19 | 0.0 | 0.00 | 6.81 | 0.01 | 2.385 | 0.08 | 0.00 | 3.9 | 94.7 | 1.4 | -0.35 | 0.59 | 0.62 | — | 4.2 | 0.018 | 1.32 | 0.0 | 0.00 | 7.42 | 0.01 | 1.974 | 32.32 | 0.00 | 15.1 | 84.5 | 0.3 | -2.28 | 1.70 | 0.83 | 0.84 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LWo | 23552 | 2023-04-26 | 2021-03-01 | 2.85 | 3.02 | — | 3.0 | 0.013 | 1.79 | 6.0 | 0.09 | 12.73 | 0.01 | 2.511 | 0.09 | 0.59 | 4.5 | 95.1 | 0.3 | -0.78 | 0.72 | 0.80 | 3.55 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 15.17 | 0.00 | 2.097 | 4.46 | 1.45 | 2.6 | 97.2 | 0.1 | 0.75 | 0.61 | 0.68 | 0.83 | 3.19 | 23556 | 2980 | 9 | 0 | 36 | 0 | 0 | logfile |
✔ | 7TLA | 25985 | 2023-04-26 | 2022-01-18 | 3.13 | 3.36 | — | 3.3 | 0.012 | 1.76 | 3.0 | 0.09 | 13.37 | 0.01 | 2.522 | 0.09 | 1.12 | 6.0 | 93.7 | 0.3 | -1.09 | 0.58 | 0.61 | 4.05 | 3.3 | 0.007 | 0.68 | 0.0 | 0.05 | 14.83 | 0.00 | 2.073 | 7.18 | 0.23 | 4.4 | 95.6 | 0.0 | -0.02 | 0.65 | 0.76 | 0.85 | 3.33 | 23052 | 2948 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LYo | 23597 | 2023-04-26 | 2021-03-07 | 3.32 | 3.53 | — | 3.5 | 0.013 | 1.75 | 5.0 | 0.09 | 12.57 | 0.01 | 2.511 | 0.09 | 0.43 | 5.4 | 94.3 | 0.3 | -0.89 | 0.78 | 0.83 | 3.84 | 3.5 | 0.004 | 0.63 | 0.0 | 0.04 | 14.44 | 0.00 | 2.180 | 6.41 | 0.27 | 3.6 | 96.4 | 0.1 | 0.36 | 0.66 | 0.81 | 0.87 | 2.95 | 23649 | 2982 | 6 | 0 | 40 | 0 | 0 | logfile |
✔ | 7KDL | 22826 | 2023-04-26 | 2020-10-08 | 2.96 | 3.49 | — | 3.4 | 0.014 | 1.76 | 2.0 | 0.10 | 12.45 | 0.01 | 1.479 | 0.09 | 0.27 | 6.1 | 93.6 | 0.3 | -0.99 | 0.78 | 0.78 | 3.84 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 14.54 | 0.00 | 2.092 | 7.03 | 1.68 | 3.6 | 96.4 | 0.0 | 0.06 | 1.22 | 0.79 | 0.83 | 3.26 | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7LWW | 23559 | 2023-04-26 | 2021-03-01 | 3.0 | 3.20 | — | 3.2 | 0.014 | 1.78 | 5.0 | 0.10 | 12.77 | 0.01 | 2.511 | 0.09 | 0.55 | 5.3 | 94.4 | 0.3 | -0.82 | 0.75 | 0.84 | 3.87 | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 15.05 | 0.00 | 2.161 | 5.91 | 1.81 | 3.2 | 96.8 | 0.0 | 0.52 | 1.24 | 0.79 | 0.87 | 3.11 | 23786 | 2982 | 18 | 0 | 50 | 0 | 0 | logfile |
✔ | 7N95 | 24250 | 2023-04-20 | 2021-06-16 | 4.1 | 3.45 | — | 2.1 | 0.002 | 0.74 | 0.0 | 0.00 | 5.05 | 0.00 | 2.573 | 0.10 | 0.00 | 7.1 | 92.3 | 0.6 | -1.14 | 0.78 | 0.70 | — | 2.1 | 0.004 | 1.01 | 0.0 | 0.00 | 4.97 | 0.00 | 2.503 | 6.53 | 0.00 | 18.1 | 81.7 | 0.2 | -3.27 | 1.81 | 0.85 | 0.83 | — | 7299 | 2433 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7M7B | 23709 | 2023-04-20 | 2021-03-27 | 2.95 | 3.73 | 2.93 | 3.1 | 0.012 | 1.87 | 5.0 | 0.11 | 13.12 | 0.02 | 2.512 | 0.10 | 0.00 | 3.5 | 96.5 | 0.0 | -0.73 | 0.62 | 0.86 | 4.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4898 | 635 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 7KE9 | 22835 | 2023-04-26 | 2020-10-10 | 3.08 | 3.62 | — | 3.5 | 0.013 | 1.74 | 0.0 | 0.09 | 12.23 | 0.01 | 2.491 | 0.11 | 0.04 | 5.8 | 94.0 | 0.2 | -0.81 | 0.80 | 0.80 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |