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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UZi | 26912 | 2024-03-15 | 2022-05-09 | 3.9 | 4.08 | — | 4.0 | 0.012 | 1.65 | 3.0 | 0.08 | 12.35 | 0.02 | 2.492 | 0.18 | 0.18 | 3.8 | 96.1 | 0.1 | -0.65 | 0.70 | 0.77 | 1.27 | 4.0 | 0.004 | 0.90 | 0.0 | 0.05 | 16.48 | 0.01 | 2.065 | 22.68 | 3.21 | 3.6 | 96.4 | 0.0 | -0.37 | 2.87 | 0.72 | 0.79 | 0.92 | 71172 | 9083 | 37 | 0 | 1 | 0 | 0 | logfile |
✔ | 8SXJ | 40854 | 2024-03-17 | 2023-05-22 | 4.0 | 4.15 | 4.01 | 4.2 | 0.019 | 1.76 | 7.0 | 0.09 | 13.38 | 0.02 | 2.555 | 0.19 | 1.10 | 7.0 | 92.3 | 0.7 | -1.09 | 0.63 | 0.78 | — | 4.2 | 0.003 | 0.74 | 0.0 | 0.04 | 16.22 | 0.00 | 2.163 | 10.07 | 3.24 | 5.1 | 94.9 | 0.0 | -0.55 | 1.18 | 0.65 | 0.82 | — | 19050 | 2415 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 8oUW | 17204 | 2024-03-10 | 2023-04-25 | 3.75 | 3.90 | 3.25 | 3.5 | 0.006 | 0.91 | 0.0 | 0.05 | 14.71 | 0.01 | 2.008 | 0.19 | 0.38 | 2.0 | 98.0 | 0.0 | 0.31 | 0.81 | 0.65 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53754 | 6564 | 25 | 67 | 13 | 0 | 0 | logfile |
✔ | 7TJZ | 25947 | 2024-03-18 | 2022-01-17 | 4.4 | 7.00 | 4.54 | 4.2 | 0.019 | 2.21 | 0.0 | 0.00 | 6.67 | 0.01 | 2.384 | 0.19 | 0.00 | 4.2 | 94.2 | 1.6 | -0.41 | 0.58 | 0.63 | — | 4.2 | 0.017 | 1.19 | 0.0 | 0.00 | 6.51 | 0.01 | 2.047 | 16.64 | 0.00 | 13.2 | 86.4 | 0.3 | -1.19 | 0.80 | 0.82 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UJA | 20794 | 2024-03-11 | 2019-10-02 | 3.3 | 3.49 | — | 3.4 | 0.014 | 1.49 | 0.0 | 0.09 | 11.59 | 0.01 | 1.802 | 0.19 | 0.14 | 2.7 | 97.1 | 0.2 | 0.28 | 0.82 | 0.82 | 3.35 | 3.4 | 0.004 | 0.64 | 0.0 | 0.05 | 13.59 | 0.00 | 1.957 | 6.58 | 2.08 | 3.7 | 96.3 | 0.0 | 0.08 | 1.48 | 0.83 | 0.85 | 2.97 | 8224 | 1128 | 10 | 0 | 23 | 0 | 0 | logfile |
✔ | 8oF4 | 16845 | 2024-03-16 | 2023-03-13 | 2.94 | 2.89 | — | 2.9 | 0.014 | 1.97 | 4.0 | 0.09 | 25.75 | 0.03 | 2.486 | 0.19 | 0.58 | 3.6 | 96.4 | 0.0 | -0.35 | 0.81 | 0.77 | 3.16 | 3.0 | 0.004 | 0.68 | 0.0 | 0.04 | 26.77 | 0.00 | 2.016 | 11.16 | 3.27 | 3.5 | 96.5 | 0.0 | 1.38 | 1.14 | 0.84 | 0.81 | 2.00 | 14087 | 1029 | 12 | 290 | 1 | 0 | 0 | logfile |
✔ | 7UZH | 26911 | 2024-03-16 | 2022-05-09 | 3.8 | 3.93 | — | 3.8 | 0.012 | 1.65 | 1.0 | 0.08 | 12.25 | 0.01 | 2.489 | 0.19 | 0.10 | 3.3 | 96.5 | 0.2 | -0.71 | 0.75 | 0.79 | 1.53 | 3.8 | 0.004 | 0.85 | 0.0 | 0.05 | 16.36 | 0.00 | 2.028 | 18.52 | 2.94 | 3.1 | 96.9 | 0.0 | -0.19 | 1.06 | 0.77 | 0.81 | 1.18 | 71955 | 9174 | 36 | 0 | 1 | 0 | 0 | logfile |
✔ | 8CSA | 26961 | 2024-03-19 | 2022-05-12 | 3.84 | 4.24 | 3.87 | 3.9 | 0.012 | 1.75 | 3.0 | 0.09 | 13.74 | 0.02 | 2.527 | 0.19 | 1.18 | 6.0 | 93.8 | 0.2 | -1.46 | 0.82 | 0.78 | 0.63 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 15.03 | 0.00 | 2.087 | 11.86 | 1.98 | 3.7 | 96.3 | 0.0 | -0.07 | 1.66 | 0.83 | 0.78 | 0.22 | 23442 | 3003 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oLK | 20115 | 2024-03-18 | 2019-04-16 | 4.0 | 4.14 | — | 4.1 | 0.005 | 1.04 | 0.0 | 0.06 | 5.09 | 0.01 | 2.445 | 0.20 | 0.00 | 2.3 | 97.7 | 0.0 | -0.75 | 0.56 | 0.49 | — | 4.1 | 0.005 | 0.93 | 0.0 | 0.05 | 7.00 | 0.00 | 2.045 | 9.16 | 0.00 | 14.0 | 86.0 | 0.0 | -2.47 | 1.44 | 0.64 | 0.61 | — | 10323 | 2094 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TPE | 26052 | 2024-03-19 | 2022-01-25 | 4.0 | 4.59 | — | 4.0 | 0.013 | 1.74 | 6.0 | 0.09 | 12.98 | 0.01 | 2.501 | 0.20 | 1.83 | 8.6 | 90.3 | 1.1 | -1.39 | 0.84 | 0.79 | — | 3.9 | 0.004 | 0.65 | 0.0 | 0.04 | 13.26 | 0.00 | 2.034 | 9.59 | 1.70 | 6.1 | 93.8 | 0.1 | -0.37 | 0.48 | 0.86 | 0.84 | — | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 8G6K | 29772 | 2024-03-14 | 2023-02-15 | 3.6 | 3.71 | 3.52 | 3.4 | 0.002 | 0.48 | 0.0 | 0.04 | 4.19 | 0.00 | 2.523 | 0.20 | 0.00 | 2.7 | 97.3 | 0.0 | 1.65 | 0.54 | 0.71 | — | 3.5 | 0.004 | 0.68 | 0.0 | 0.04 | 4.83 | 0.00 | 2.269 | 4.05 | 0.00 | 8.2 | 91.8 | 0.0 | -0.23 | 1.47 | 0.54 | 0.74 | — | 9388 | 1379 | 7 | 0 | 0 | 0 | 2576 | logfile |
✔ | 6X2C | 22001 | 2024-03-19 | 2020-05-20 | 3.2 | 3.70 | 3.21 | 3.6 | 0.013 | 1.81 | 6.0 | 0.09 | 13.39 | 0.02 | 2.550 | 0.20 | 3.17 | 5.3 | 94.4 | 0.3 | -1.74 | 0.79 | 0.81 | 3.48 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 13.96 | 0.00 | 2.199 | 5.34 | 2.70 | 3.7 | 96.3 | 0.0 | 0.21 | 1.23 | 0.80 | 0.84 | 2.89 | 22800 | 2913 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TP1 | 26045 | 2024-03-19 | 2022-01-24 | 3.81 | 4.30 | — | 3.8 | 0.014 | 1.75 | 5.0 | 0.10 | 13.20 | 0.01 | 2.523 | 0.21 | 1.39 | 6.7 | 92.4 | 0.9 | -1.32 | 0.85 | 0.84 | 1.81 | 3.8 | 0.005 | 0.67 | 0.0 | 0.04 | 13.49 | 0.00 | 2.050 | 8.51 | 1.05 | 5.3 | 94.7 | 0.0 | 0.03 | 1.19 | 0.86 | 0.85 | 1.62 | 24646 | 3046 | 20 | 0 | 61 | 0 | 0 | logfile |
✘ | 7TP2 | 26046 | 2024-03-19 | 2022-01-24 | 3.72 | 4.22 | — | 3.7 | 0.014 | 1.76 | 6.0 | 0.10 | 13.20 | 0.01 | 2.529 | 0.21 | 1.32 | 7.2 | 92.4 | 0.4 | -1.34 | 0.85 | 0.84 | 2.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24663 | 3047 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7QKJ | 14044 | 2024-03-11 | 2021-12-17 | 3.26 | 3.08 | 3.11 | 3.2 | 0.012 | 2.04 | 12.0 | 0.16 | 11.59 | 0.01 | 2.510 | 0.21 | 0.00 | 9.9 | 90.1 | 0.0 | -2.24 | 0.35 | 0.71 | 3.92 | 3.2 | 0.005 | 0.80 | 0.0 | 0.05 | 15.73 | 0.00 | 2.083 | 10.18 | 2.90 | 7.1 | 92.9 | 0.0 | -2.87 | 1.06 | 0.36 | 0.85 | 2.89 | 6888 | 900 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UZK | 26914 | 2024-03-25 | 2022-05-09 | 3.0 | 3.14 | — | 3.1 | 0.012 | 1.74 | 8.0 | 0.09 | 12.77 | 0.01 | 2.272 | 0.21 | 0.30 | 2.6 | 97.2 | 0.2 | -0.44 | 0.71 | 0.81 | 3.51 | 3.1 | 0.006 | 0.69 | 0.0 | 0.05 | 16.39 | 0.00 | 2.102 | 6.37 | 2.20 | 3.2 | 96.8 | 0.0 | 0.86 | 1.68 | 0.73 | 0.83 | 2.88 | 45246 | 5702 | 20 | 0 | 2 | 0 | 0 | logfile |
✔ | 8BBE | 15954 | 2024-03-18 | 2022-10-12 | 3.5 | 4.13 | 3.62 | 3.7 | 0.013 | 1.80 | 8.0 | 0.10 | 13.29 | 0.02 | 2.550 | 0.22 | 0.05 | 4.2 | 95.8 | 0.0 | -1.28 | 0.77 | 0.66 | 1.77 | 3.7 | 0.004 | 0.71 | 0.0 | 0.04 | 15.40 | 0.00 | 2.127 | 14.38 | 1.65 | 4.5 | 95.5 | 0.0 | 0.03 | 1.81 | 0.83 | 0.77 | 1.15 | 20181 | 2513 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 6UQK | 20849 | 2024-03-25 | 2019-10-20 | 3.77 | 4.46 | 4.11 | 4.3 | 0.003 | 0.53 | 0.0 | 0.04 | 9.91 | 0.00 | 2.196 | 0.22 | 0.00 | 5.0 | 95.0 | 0.0 | -1.84 | 0.74 | 0.78 | 1.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 51567 | 8032 | 8 | 0 | 188 | 0 | 0 | logfile |
✔ | 7SG4 | 25105 | 2024-03-20 | 2021-10-04 | 3.43 | 4.18 | — | 3.5 | 0.014 | 1.91 | 30.0 | 0.12 | 13.18 | 0.02 | 2.531 | 0.22 | 2.01 | 9.5 | 88.9 | 1.6 | -2.14 | 0.84 | 0.82 | 2.83 | 3.5 | 0.005 | 0.74 | 0.0 | 0.05 | 13.53 | 0.00 | 2.031 | 10.62 | 1.40 | 9.0 | 90.8 | 0.2 | -0.89 | 1.22 | 0.85 | 0.82 | 2.03 | 28709 | 3737 | 8 | 0 | 47 | 0 | 0 | logfile |
✔ | 6G8Z | 4362 | 2024-03-16 | 2018-04-10 | 3.66 | 3.88 | 3.72 | 3.8 | 0.005 | 0.77 | 0.0 | 0.04 | 8.70 | 0.00 | 2.362 | 0.22 | 0.00 | 3.8 | 96.2 | 0.0 | -0.63 | 0.66 | 0.79 | 4.14 | 3.8 | 0.002 | 0.54 | 0.0 | 0.04 | 13.74 | 0.00 | 2.178 | 5.17 | 2.09 | 2.9 | 97.1 | 0.0 | 2.60 | 1.66 | 0.70 | 0.84 | 2.62 | 15966 | 1908 | 6 | 0 | 0 | 0 | 0 | logfile |