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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7F4V | 31455 | 2022-12-19 | 2021-06-21 | 2.04 | 1.80 | — | 2.0 | 0.025 | 2.42 | 0.0 | 0.08 | 19.55 | 0.03 | 1.203 | 4.76 | 2.78 | 3.0 | 96.9 | 0.1 | -2.15 | 0.70 | 0.83 | 6.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67641 | 6336 | 78 | 0 | 453 | 402 | 0 | logfile |
✔ | 7PQU | 13605 | 2022-12-12 | 2021-09-20 | 3.03 | 1.80 | — | 3.4 | 0.008 | 0.88 | 0.0 | 0.05 | 16.72 | 0.01 | 0.051 | 14.92 | 5.14 | 7.9 | 92.0 | 0.1 | -3.95 | 0.77 | 0.80 | 2.84 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 16.51 | 0.01 | 2.240 | 10.70 | 0.18 | 6.2 | 93.8 | 0.0 | -0.68 | 0.98 | 0.76 | 0.79 | 2.49 | 10798 | 1312 | 12 | 0 | 8 | 14 | 0 | logfile |
✔ | 7PF1 | 13364 | 2022-12-21 | 2021-08-11 | 2.1 | 1.83 | — | 2.0 | 0.020 | 1.66 | 0.0 | 0.12 | 14.32 | 0.01 | 1.766 | 1.61 | 0.65 | 1.7 | 98.3 | 0.0 | 1.14 | 0.71 | 0.75 | 6.05 | 1.8 | 0.003 | 0.56 | 0.0 | 0.04 | 17.16 | 0.00 | 1.943 | 11.41 | 0.05 | 1.7 | 98.3 | 0.0 | 5.04 | 1.38 | 0.78 | 0.82 | 7.01 | 41646 | 4176 | 72 | 0 | 263 | 7207 | 0 | logfile |
✔ | 7V66 | 31736 | 2022-12-18 | 2021-08-19 | 1.89 | 1.85 | — | 5.2 | 0.006 | 1.02 | 0.0 | 0.07 | 12.14 | 0.01 | 1.929 | 1.95 | 2.07 | 1.9 | 98.0 | 0.0 | 1.97 | 0.09 | 0.05 | 1.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33216 | 4128 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 7SA3 | 24943 | 2022-12-18 | 2021-09-22 | 2.25 | 1.86 | — | 2.2 | 0.022 | 2.27 | 0.0 | 0.08 | 19.95 | 0.01 | 1.206 | 11.63 | 4.04 | 3.7 | 96.0 | 0.2 | -1.16 | 0.78 | 0.84 | 4.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15960 | 1644 | 19 | 0 | 79 | 230 | 0 | logfile |
✔ | 8CTE | 26988 | 2022-12-20 | 2022-05-14 | 2.9 | 1.86 | 2.80 | 1.5 | 0.002 | 0.52 | 1.0 | 0.04 | 11.29 | 0.00 | 2.214 | 5.69 | 2.34 | 1.6 | 98.3 | 0.1 | 2.02 | 0.78 | 0.75 | 3.53 | 1.4 | 0.004 | 0.59 | 0.0 | 0.04 | 15.03 | 0.00 | 2.062 | 7.27 | 1.33 | 2.1 | 97.8 | 0.1 | 1.65 | 0.57 | 0.80 | 0.78 | 3.97 | 38844 | 4984 | 21 | 0 | 16 | 0 | 0 | logfile |
✔ | 8A57 | 15161 | 2022-12-16 | 2022-06-14 | 2.3 | 1.87 | 2.34 | 2.1 | 0.011 | 1.72 | 2.0 | 0.12 | 15.42 | 0.02 | 1.972 | 3.37 | 2.49 | 7.1 | 91.7 | 1.2 | -3.32 | 0.61 | 0.75 | 3.99 | 2.0 | 0.005 | 0.81 | 0.0 | 0.04 | 16.08 | 0.01 | 1.803 | 9.66 | 3.44 | 5.0 | 94.9 | 0.1 | -1.05 | 1.28 | 0.68 | 0.77 | 3.91 | 92760 | 3527 | 39 | 3022 | 167 | 0 | 0 | logfile |
✔ | 6ZGL | 11210 | 2022-12-13 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.41 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 2.118 | 4.99 | 1.00 | 0.6 | 99.4 | 0.0 | 3.59 | 0.75 | 0.75 | 0.83 | 7.07 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✘ | 7D1T | 30547 | 2022-12-19 | 2020-09-15 | 1.95 | 1.88 | 1.89 | 1.9 | 0.020 | 1.91 | 31.0 | 0.10 | 18.53 | 0.02 | 1.200 | 3.45 | 2.40 | 1.9 | 97.9 | 0.2 | -0.93 | 0.77 | 0.85 | 6.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✔ | 6S61 | 10101 | 2022-12-14 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.62 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.003 | 0.57 | 0.0 | 0.03 | 14.82 | 0.00 | 1.798 | 5.19 | 0.65 | 1.8 | 98.2 | 0.0 | 4.54 | 0.74 | 0.80 | 0.90 | 8.65 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |
✘ | 7UTA | 26764 | 2022-12-18 | 2022-04-26 | 2.4 | 1.90 | 2.36 | 1.6 | 0.030 | 0.77 | 0.0 | 0.05 | 18.18 | 0.00 | 1.975 | 12.61 | 2.71 | 4.1 | 95.7 | 0.3 | -0.49 | 0.78 | 0.79 | 3.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24323 | 3068 | 20 | 0 | 22 | 55 | 0 | logfile |
✔ | 7P6A | 13223 | 2022-12-11 | 2021-07-15 | 1.9 | 1.91 | 1.88 | 1.9 | 0.004 | 0.72 | 0.0 | 0.06 | 12.30 | 0.01 | 2.247 | 3.33 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.51 | 0.86 | 7.13 | 1.9 | 0.003 | 0.65 | 0.0 | 0.05 | 14.09 | 0.00 | 2.291 | 4.28 | 0.00 | 4.7 | 95.3 | 0.0 | -2.61 | 0.82 | 0.55 | 0.89 | 7.80 | 4166 | 540 | 10 | 0 | 0 | 76 | 0 | logfile |
✔ | 8A5i | 15175 | 2022-12-16 | 2022-06-15 | 2.3 | 1.92 | 2.20 | 2.2 | 0.011 | 1.72 | 1.0 | 0.12 | 15.57 | 0.02 | 1.234 | 3.44 | 2.48 | 5.4 | 93.2 | 1.4 | -2.45 | 0.49 | 0.73 | 5.52 | 2.1 | 0.005 | 0.78 | 0.0 | 0.04 | 15.64 | 0.01 | 1.599 | 7.73 | 2.08 | 4.3 | 95.4 | 0.2 | -0.31 | 0.88 | 0.68 | 0.85 | 5.25 | 89799 | 2973 | 56 | 3022 | 172 | 1381 | 0 | logfile |
✘ | 7UT9 | 26763 | 2022-12-18 | 2022-04-26 | 2.44 | 1.92 | 2.20 | 1.7 | 0.020 | 0.68 | 0.0 | 0.05 | 18.68 | 0.00 | 1.975 | 10.01 | 3.62 | 3.3 | 96.5 | 0.2 | 0.25 | 0.80 | 0.80 | 3.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20243 | 2538 | 18 | 0 | 13 | 60 | 0 | logfile |
✘ | 7D1U | 30548 | 2022-12-22 | 2020-09-15 | 2.08 | 1.94 | 2.04 | 2.0 | 0.018 | 1.83 | 27.0 | 0.10 | 18.50 | 0.02 | 1.202 | 4.10 | 3.09 | 2.3 | 97.5 | 0.2 | -1.36 | 0.74 | 0.87 | 6.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52655 | 5312 | 106 | 0 | 196 | 2121 | 0 | logfile |
✘ | 7UT7 | 26757 | 2022-12-18 | 2022-04-26 | 1.91 | 1.94 | 1.87 | 2.0 | 0.042 | 0.66 | 0.0 | 0.05 | 16.33 | 0.01 | 1.975 | 5.18 | 0.87 | 2.4 | 97.6 | 0.0 | 0.26 | 0.72 | 0.85 | 7.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✘ | 7UT8 | 26760 | 2022-12-18 | 2022-04-26 | 2.43 | 1.94 | 2.10 | 1.7 | 0.020 | 0.64 | 0.0 | 0.05 | 18.54 | 0.00 | 1.974 | 9.48 | 3.66 | 3.2 | 96.7 | 0.1 | 0.19 | 0.82 | 0.82 | 3.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20221 | 2538 | 18 | 0 | 13 | 29 | 0 | logfile |
✔ | 7MiJ | 23853 | 2022-12-14 | 2021-04-17 | 1.98 | 1.95 | — | 2.0 | 0.010 | 1.38 | 4.0 | 0.05 | 19.92 | 0.01 | 2.320 | 3.08 | 0.18 | 2.8 | 97.2 | 0.0 | -3.96 | 0.75 | 0.81 | 5.48 | 2.0 | 0.004 | 0.69 | 0.0 | 0.04 | 18.91 | 0.00 | 2.094 | 5.63 | 1.27 | 3.8 | 96.2 | 0.0 | 0.72 | 0.64 | 0.77 | 0.82 | 5.32 | 23010 | 2556 | 12 | 0 | 38 | 328 | 0 | logfile |
✔ | 8CS9 | 26960 | 2022-12-12 | 2022-05-12 | 2.74 | 1.95 | — | 1.6 | 0.006 | 0.84 | 0.0 | 0.05 | 17.88 | 0.01 | 2.218 | 10.43 | 3.66 | 2.2 | 97.5 | 0.3 | 0.33 | 0.82 | 0.81 | 3.50 | 1.6 | 0.003 | 0.55 | 0.0 | 0.04 | 17.79 | 0.00 | 2.136 | 8.28 | 2.78 | 1.9 | 98.1 | 0.0 | 1.60 | 0.38 | 0.83 | 0.83 | 3.44 | 60944 | 7677 | 39 | 0 | 27 | 268 | 0 | logfile |
✘ | 8DPN | 27639 | 2022-12-18 | 2022-07-15 | 2.49 | 1.95 | 2.55 | 1.7 | 0.023 | 0.60 | 0.0 | 0.04 | 17.47 | 0.00 | 1.898 | 7.23 | 0.99 | 2.5 | 97.5 | 0.0 | 0.56 | 0.83 | 0.84 | 4.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16067 | 1998 | 12 | 0 | 8 | 40 | 0 | logfile |