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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WWo | 21942 | 2022-12-12 | 2020-05-09 | 2.8 | 2.07 | 2.79 | 1.9 | 0.011 | 1.28 | 3.0 | 0.06 | 15.86 | 0.02 | 1.958 | 6.13 | 1.99 | 6.1 | 93.5 | 0.3 | -4.55 | 0.58 | 0.74 | 4.64 | 2.0 | 0.003 | 0.66 | 0.0 | 0.04 | 17.68 | 0.00 | 1.992 | 9.19 | 2.94 | 3.3 | 96.6 | 0.1 | -0.18 | 2.14 | 0.59 | 0.80 | 3.83 | 9784 | 1230 | 6 | 1 | 5 | 0 | 0 | logfile |
✔ | 7UAF | 26423 | 2022-12-13 | 2022-03-12 | 2.4 | 2.07 | 3.04 | 1.6 | 0.012 | 1.81 | 13.0 | 0.10 | 14.22 | 0.02 | 1.783 | 1.50 | 0.16 | 3.1 | 96.9 | 0.0 | -0.18 | 0.80 | 0.80 | 5.45 | 1.6 | 0.006 | 0.67 | 0.0 | 0.05 | 17.51 | 0.00 | 1.847 | 7.78 | 2.06 | 3.7 | 96.3 | 0.0 | -0.15 | 1.19 | 0.83 | 0.83 | 4.18 | 17864 | 2131 | 22 | 0 | 58 | 0 | 0 | logfile |
✔ | 7NA7 | 24267 | 2022-12-12 | 2021-06-20 | 2.7 | 2.07 | — | 2.0 | 0.006 | 1.04 | 5.0 | 0.22 | 12.93 | 0.01 | 2.178 | 7.49 | 0.61 | 1.6 | 98.4 | 0.0 | 0.32 | 0.76 | 0.75 | 3.53 | 1.9 | 0.004 | 0.79 | 1.0 | 0.07 | 15.93 | 0.00 | 2.005 | 10.37 | 1.83 | 2.4 | 97.6 | 0.0 | 0.48 | 0.71 | 0.81 | 0.82 | 3.67 | 9036 | 1142 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 7UTZ | 26795 | 2022-12-15 | 2022-04-28 | 2.4 | 2.07 | — | 2.4 | 0.004 | 0.68 | 0.0 | 0.04 | 12.23 | 0.01 | 2.137 | 4.00 | 0.08 | 3.0 | 97.0 | 0.0 | -0.05 | 0.66 | 0.68 | 3.51 | 1.6 | 0.003 | 0.56 | 0.0 | 0.04 | 14.95 | 0.00 | 1.922 | 8.63 | 1.94 | 3.3 | 96.7 | 0.0 | 0.06 | 0.78 | 0.72 | 0.76 | 3.37 | 23679 | 1536 | 10 | 0 | 8 | 0 | 11632 | logfile |
✔ | 6WWU | 21948 | 2022-12-12 | 2020-05-09 | 2.7 | 2.08 | 2.76 | 1.9 | 0.011 | 1.26 | 1.0 | 0.06 | 16.22 | 0.02 | 2.072 | 6.98 | 2.78 | 5.8 | 94.0 | 0.2 | -3.98 | 0.60 | 0.76 | 4.02 | 1.9 | 0.003 | 0.63 | 0.0 | 0.04 | 17.74 | 0.00 | 1.999 | 7.14 | 1.92 | 3.2 | 96.7 | 0.1 | -0.34 | 0.69 | 0.61 | 0.83 | 3.91 | 9688 | 1216 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 6WWR | 21945 | 2022-12-12 | 2020-05-09 | 2.7 | 2.08 | 2.69 | 1.9 | 0.009 | 0.96 | 1.0 | 0.06 | 14.63 | 0.01 | 1.967 | 5.49 | 0.57 | 5.8 | 94.2 | 0.0 | -3.62 | 0.60 | 0.77 | 5.00 | 2.0 | 0.005 | 0.69 | 0.0 | 0.05 | 16.98 | 0.00 | 1.893 | 7.17 | 2.01 | 4.3 | 95.7 | 0.0 | -0.46 | 1.08 | 0.62 | 0.84 | 3.96 | 9719 | 1220 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 8CSX | 26974 | 2022-12-12 | 2022-05-13 | 2.4 | 2.08 | 2.44 | 2.1 | 0.006 | 0.79 | 1.0 | 0.05 | 13.62 | 0.01 | 2.208 | 5.36 | 3.86 | 1.7 | 98.2 | 0.1 | 1.76 | 0.69 | 0.88 | 5.16 | 2.1 | 0.003 | 0.55 | 0.0 | 0.04 | 15.77 | 0.00 | 2.106 | 6.52 | 1.29 | 1.5 | 98.5 | 0.0 | 2.21 | 0.37 | 0.68 | 0.87 | 4.46 | 9116 | 1158 | 8 | 0 | 4 | 150 | 0 | logfile |
✔ | 7S8L | 24896 | 2022-12-11 | 2021-09-18 | 2.45 | 2.08 | 2.46 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 12.22 | 0.00 | 2.238 | 2.57 | 0.00 | 3.5 | 96.5 | 0.0 | 1.27 | 0.81 | 0.80 | 4.28 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 15.39 | 0.00 | 2.272 | 3.39 | 1.82 | 3.5 | 96.5 | 0.0 | 1.25 | 0.35 | 0.84 | 0.84 | 3.82 | 8177 | 1096 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DWG | 27753 | 2022-12-12 | 2022-08-01 | 2.71 | 2.08 | 2.72 | 1.8 | 0.006 | 0.64 | 0.0 | 0.05 | 12.65 | 0.00 | 2.106 | 6.99 | 0.00 | 4.5 | 95.5 | 0.0 | -1.14 | 0.78 | 0.81 | 4.92 | 1.8 | 0.004 | 0.59 | 0.0 | 0.04 | 15.14 | 0.00 | 2.107 | 6.25 | 1.52 | 4.3 | 95.7 | 0.0 | 0.76 | 0.32 | 0.80 | 0.84 | 3.66 | 8350 | 1101 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8E9Z | 27969 | 2022-12-12 | 2022-08-27 | 2.69 | 2.09 | 2.64 | 1.9 | 0.004 | 0.80 | 2.0 | 0.05 | 15.12 | 0.01 | 2.248 | 9.78 | 0.34 | 3.2 | 96.8 | 0.0 | -1.79 | 0.79 | 0.79 | 2.55 | 1.9 | 0.004 | 0.60 | 0.0 | 0.04 | 15.94 | 0.00 | 2.072 | 7.87 | 1.03 | 2.3 | 97.7 | 0.0 | 0.42 | 0.32 | 0.79 | 0.80 | 2.97 | 8566 | 1129 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7LF0 | 23296 | 2022-12-19 | 2021-01-15 | 3.68 | 2.09 | 3.76 | 3.7 | 0.008 | 1.10 | 0.0 | 0.06 | 10.18 | 0.01 | 2.157 | 7.70 | 1.09 | 11.4 | 87.8 | 0.8 | -4.41 | 0.51 | 0.54 | 1.30 | 3.6 | 0.004 | 0.89 | 0.0 | 0.05 | 14.96 | 0.01 | 2.026 | 21.18 | 0.65 | 11.6 | 88.2 | 0.2 | -2.92 | 0.99 | 0.52 | 0.55 | 1.05 | 34548 | 4542 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RH9 | 24458 | 2022-12-13 | 2021-07-16 | 2.61 | 2.09 | — | 2.5 | 0.003 | 0.57 | 0.0 | 0.04 | 13.27 | 0.01 | 2.214 | 5.89 | 0.00 | 1.3 | 98.7 | 0.0 | 1.30 | 0.64 | 0.84 | 4.07 | 2.5 | 0.003 | 0.50 | 0.0 | 0.04 | 15.76 | 0.00 | 2.179 | 8.63 | 1.05 | 1.7 | 98.3 | 0.0 | 2.64 | 0.91 | 0.64 | 0.86 | 3.96 | 14680 | 1792 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TYo | 26190 | 2022-12-12 | 2022-02-14 | 2.7 | 2.09 | 2.60 | 2.4 | 0.002 | 0.46 | 0.0 | 0.04 | 12.83 | 0.00 | 2.176 | 5.61 | 1.37 | 2.0 | 98.0 | 0.0 | -3.13 | 0.54 | 0.74 | 3.81 | 2.4 | 0.002 | 0.51 | 0.0 | 0.04 | 16.11 | 0.00 | 2.187 | 6.12 | 2.22 | 1.4 | 98.6 | 0.0 | 0.75 | 1.05 | 0.54 | 0.76 | 3.42 | 9052 | 1141 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7U67 | 26362 | 2022-12-22 | 2022-03-03 | 2.5 | 2.10 | 2.53 | 1.8 | 0.005 | 0.75 | 0.0 | 0.05 | 17.77 | 0.00 | 2.161 | 3.35 | 0.91 | 2.4 | 97.6 | 0.0 | -0.22 | 0.79 | 0.79 | 3.83 | 1.8 | 0.004 | 0.58 | 0.0 | 0.04 | 17.82 | 0.00 | 2.014 | 4.39 | 1.64 | 3.1 | 96.9 | 0.0 | 0.87 | 0.40 | 0.83 | 0.83 | 3.39 | 26778 | 3360 | 18 | 0 | 12 | 0 | 0 | logfile |
✔ | 7S3H | 24823 | 2022-12-12 | 2021-09-06 | 2.5 | 2.10 | 2.54 | 1.7 | 0.009 | 1.08 | 0.0 | 0.05 | 16.91 | 0.01 | 2.234 | 3.82 | 0.11 | 3.7 | 96.3 | 0.0 | -1.50 | 0.75 | 0.71 | 1.79 | 1.7 | 0.003 | 0.64 | 0.0 | 0.04 | 18.78 | 0.00 | 2.138 | 12.03 | 2.29 | 3.1 | 96.9 | 0.0 | -0.02 | 0.75 | 0.78 | 0.76 | 2.09 | 9966 | 1030 | 4 | 75 | 1 | 0 | 0 | logfile |
✔ | 7TQY | 26075 | 2022-12-12 | 2022-01-27 | 2.6 | 2.10 | 2.62 | 1.9 | 0.005 | 0.85 | 0.0 | 0.05 | 16.19 | 0.01 | 1.947 | 3.28 | 1.12 | 3.3 | 96.7 | 0.0 | 0.37 | 0.62 | 0.83 | 3.67 | 1.9 | 0.004 | 0.61 | 0.0 | 0.04 | 16.74 | 0.00 | 1.922 | 6.76 | 2.33 | 3.7 | 96.3 | 0.0 | 0.82 | 0.41 | 0.61 | 0.83 | 3.74 | 9890 | 1235 | 6 | 1 | 6 | 0 | 0 | logfile |
✔ | 8E9X | 27967 | 2022-12-12 | 2022-08-27 | 2.7 | 2.10 | 2.72 | 1.9 | 0.004 | 0.61 | 0.0 | 0.04 | 12.41 | 0.00 | 2.200 | 6.58 | 0.00 | 4.2 | 95.8 | 0.0 | -0.15 | 0.78 | 0.79 | 3.99 | 1.9 | 0.003 | 0.54 | 0.0 | 0.04 | 15.10 | 0.00 | 2.121 | 6.76 | 1.38 | 3.7 | 96.3 | 0.0 | 0.82 | 0.34 | 0.80 | 0.82 | 3.56 | 8380 | 1109 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7T9N | 25763 | 2022-12-15 | 2021-12-19 | 2.9 | 2.10 | — | 2.9 | 0.006 | 0.72 | 0.0 | 0.06 | 13.08 | 0.01 | 2.020 | 6.26 | 0.21 | 4.1 | 95.9 | 0.0 | 0.67 | 0.70 | 0.73 | 3.97 | 2.9 | 0.005 | 0.60 | 0.0 | 0.06 | 15.50 | 0.00 | 1.934 | 7.21 | 1.24 | 3.8 | 96.2 | 0.0 | 0.23 | 1.10 | 0.77 | 0.80 | 4.20 | 26426 | 1723 | 8 | 0 | 4 | 0 | 13037 | logfile |
✔ | 7U65 | 26360 | 2022-12-22 | 2022-03-03 | 2.8 | 2.10 | 2.73 | 1.9 | 0.005 | 0.65 | 0.0 | 0.05 | 12.92 | 0.01 | 2.297 | 2.74 | 0.46 | 3.6 | 96.4 | 0.0 | 1.18 | 0.78 | 0.77 | 3.50 | 1.9 | 0.003 | 0.53 | 0.0 | 0.04 | 15.50 | 0.00 | 2.154 | 3.71 | 0.96 | 2.8 | 97.2 | 0.0 | 2.45 | 0.44 | 0.81 | 0.81 | 2.96 | 26616 | 3384 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UUS | 20901 | 2022-12-12 | 2019-10-31 | 2.4 | 2.10 | 2.30 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 17.13 | 0.00 | 2.214 | 7.72 | 3.27 | 2.8 | 97.2 | 0.0 | -2.25 | 0.57 | 0.73 | 3.22 | 2.3 | 0.003 | 0.60 | 0.0 | 0.04 | 17.76 | 0.00 | 2.168 | 9.36 | 2.25 | 3.6 | 96.4 | 0.0 | 0.60 | 1.00 | 0.63 | 0.78 | 3.21 | 9308 | 1190 | 7 | 0 | 0 | 0 | 0 | logfile |