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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WX6 | 21951 | 2022-05-14 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.004 | 0.55 | 0.0 | 0.04 | 16.24 | 0.00 | 2.003 | 3.40 | 0.69 | 1.2 | 98.8 | 0.0 | 4.62 | 0.53 | 0.78 | 0.90 | 7.39 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |
✔ | 7JFo | 22308 | 2022-05-17 | 2020-07-17 | 2.13 | 2.12 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 12.07 | 0.01 | 2.198 | 6.82 | 1.23 | 3.9 | 96.1 | 0.0 | -0.96 | 0.72 | 0.78 | 6.96 | 2.1 | 0.004 | 0.70 | 0.0 | 0.05 | 14.50 | 0.01 | 2.200 | 7.44 | 0.77 | 2.8 | 97.2 | 0.0 | 1.05 | 0.78 | 0.70 | 0.81 | 5.91 | 38958 | 4832 | 40 | 0 | 0 | 1198 | 0 | logfile |
✔ | 7S8o | 24899 | 2022-05-12 | 2021-09-18 | 2.58 | 2.12 | 2.59 | 1.9 | 0.008 | 0.79 | 0.0 | 0.05 | 13.16 | 0.00 | 2.102 | 3.36 | 0.00 | 5.8 | 94.2 | 0.0 | 0.31 | 0.81 | 0.80 | 4.50 | 1.9 | 0.008 | 0.99 | 0.0 | 0.04 | 15.83 | 0.00 | 2.222 | 3.67 | 1.61 | 4.2 | 95.8 | 0.0 | 0.97 | 0.38 | 0.84 | 0.83 | 3.24 | 8331 | 1101 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7oY2 | 13108 | 2022-05-12 | 2021-06-23 | 2.06 | 2.12 | 2.05 | 2.2 | 0.006 | 0.92 | 1.0 | 0.05 | 15.87 | 0.01 | 1.171 | 13.44 | 0.42 | 0.8 | 99.2 | 0.0 | 1.10 | 0.77 | 0.84 | 5.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7166 | 858 | 7 | 0 | 7 | 24 | 0 | logfile |
✔ | 7LVQ | 23540 | 2022-05-13 | 2021-02-26 | 2.9 | 2.12 | 2.86 | 2.0 | 0.024 | 1.33 | 1.0 | 0.09 | 14.76 | 0.01 | 1.920 | 5.41 | 0.66 | 6.4 | 93.5 | 0.1 | -3.20 | 0.55 | 0.77 | 4.09 | 2.0 | 0.003 | 0.65 | 0.0 | 0.04 | 17.22 | 0.00 | 2.029 | 8.32 | 1.42 | 3.0 | 97.0 | 0.0 | 0.02 | 1.04 | 0.57 | 0.82 | 3.35 | 9767 | 1226 | 6 | 1 | 5 | 0 | 0 | logfile |
✔ | 6UVA | 20906 | 2022-05-13 | 2019-11-01 | 2.3 | 2.12 | 2.31 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 18.07 | 0.00 | 2.207 | 6.97 | 3.36 | 3.2 | 96.8 | 0.0 | -2.29 | 0.63 | 0.72 | 2.83 | 2.3 | 0.003 | 0.61 | 0.0 | 0.04 | 18.40 | 0.00 | 2.158 | 8.39 | 3.55 | 4.4 | 95.6 | 0.0 | 0.30 | 1.31 | 0.66 | 0.78 | 2.82 | 9561 | 1199 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SQ6 | 25377 | 2022-05-13 | 2021-11-04 | 2.32 | 2.12 | — | 2.3 | 0.006 | 0.77 | 0.0 | 0.06 | 16.54 | 0.00 | 2.408 | 4.99 | 0.00 | 2.8 | 97.2 | 0.0 | 1.57 | 0.69 | 0.88 | 4.86 | 2.3 | 0.010 | 1.24 | 0.0 | 0.04 | 16.98 | 0.01 | 2.222 | 3.85 | 2.39 | 1.7 | 98.3 | 0.0 | 2.27 | 0.91 | 0.70 | 0.90 | 4.68 | 15342 | 1868 | 16 | 0 | 14 | 12 | 0 | logfile |
✔ | 7V9L | 31824 | 2022-05-12 | 2021-08-26 | 2.6 | 2.13 | — | 1.8 | 0.004 | 0.69 | 0.0 | 0.05 | 13.08 | 0.01 | 2.120 | 4.19 | 0.00 | 3.8 | 96.2 | 0.0 | 0.00 | 0.67 | 0.70 | 3.73 | 1.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.79 | 0.00 | 2.135 | 10.88 | 1.38 | 2.2 | 97.8 | 0.0 | 0.96 | 0.50 | 0.77 | 0.78 | 2.85 | 8047 | 1019 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NK7 | 12432 | 2022-05-17 | 2021-02-17 | 2.11 | 2.13 | — | 2.1 | 0.006 | 0.63 | 0.0 | 0.05 | 16.46 | 0.00 | 2.121 | 3.65 | 0.88 | 1.8 | 98.1 | 0.1 | 1.07 | 0.80 | 0.89 | 5.91 | 2.1 | 0.003 | 0.55 | 0.0 | 0.04 | 16.33 | 0.00 | 1.838 | 3.54 | 0.84 | 1.8 | 98.1 | 0.1 | 1.33 | 0.22 | 0.81 | 0.91 | 5.74 | 45644 | 2954 | 20 | 0 | 11 | 459 | 22525 | logfile |
✔ | 7S8M | 24897 | 2022-05-12 | 2021-09-18 | 2.54 | 2.13 | 2.54 | 2.0 | 0.004 | 0.59 | 0.0 | 0.04 | 12.64 | 0.00 | 2.171 | 6.94 | 0.00 | 4.1 | 95.9 | 0.0 | 0.46 | 0.79 | 0.80 | 4.13 | 2.0 | 0.003 | 0.56 | 0.0 | 0.04 | 15.00 | 0.00 | 2.213 | 6.94 | 1.95 | 4.2 | 95.8 | 0.0 | 1.25 | 0.33 | 0.81 | 0.82 | 3.88 | 8346 | 1102 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LEZ | 23295 | 2022-05-15 | 2021-01-15 | 4.15 | 2.14 | 4.23 | 3.9 | 0.007 | 1.20 | 0.0 | 0.06 | 10.28 | 0.01 | 1.255 | 12.12 | 0.91 | 10.1 | 89.2 | 0.7 | -4.35 | 0.77 | 0.65 | — | 3.9 | 0.004 | 0.85 | 0.0 | 0.05 | 11.75 | 0.01 | 1.288 | 23.07 | 0.00 | 11.6 | 88.2 | 0.2 | -1.83 | 1.81 | 0.78 | 0.66 | — | 27794 | 3654 | 20 | 0 | 12 | 0 | 0 | logfile |
✔ | 7SQG | 25384 | 2022-05-12 | 2021-11-05 | 2.6 | 2.14 | — | 1.9 | 0.004 | 0.56 | 0.0 | 0.05 | 14.80 | 0.00 | 2.423 | 3.58 | 0.00 | 3.0 | 97.0 | 0.0 | 1.39 | 0.75 | 0.77 | 3.39 | 1.8 | 0.006 | 0.67 | 0.0 | 0.05 | 18.89 | 0.01 | 2.071 | 8.38 | 1.88 | 4.2 | 95.8 | 0.0 | 1.28 | 0.97 | 0.81 | 0.82 | 3.52 | 6630 | 810 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6RW4 | 10021 | 2022-05-15 | 2019-06-03 | 2.97 | 2.14 | 2.97 | 2.8 | 0.008 | 0.67 | 0.0 | 0.08 | 13.23 | 0.01 | 1.650 | 2.52 | 0.06 | 3.0 | 97.0 | 0.1 | -2.57 | 0.85 | 0.84 | 4.78 | 2.8 | 0.004 | 0.65 | 0.0 | 0.04 | 14.52 | 0.00 | 1.669 | 3.55 | 0.82 | 2.0 | 98.0 | 0.0 | 1.04 | 1.97 | 0.87 | 0.87 | 4.33 | 128080 | 5920 | 47 | 955 | 85 | 59 | 59211 | logfile |
✘ | 7EDA | 31062 | 2022-05-15 | 2021-03-15 | 2.78 | 2.14 | 2.78 | 2.1 | 0.019 | 1.96 | 0.0 | 0.07 | 17.43 | 0.02 | 1.308 | 9.52 | 0.47 | 3.4 | 96.6 | 0.0 | -4.11 | 0.67 | 0.76 | 4.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22843 | 2567 | 32 | 0 | 67 | 16 | 0 | logfile |
✔ | 7M3N | 23658 | 2022-05-12 | 2021-03-18 | 2.4 | 2.15 | 2.40 | 1.9 | 0.005 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.168 | 5.79 | 4.28 | 4.3 | 95.6 | 0.1 | -2.53 | 0.43 | 0.82 | 4.98 | 1.9 | 0.005 | 0.62 | 0.0 | 0.05 | 16.99 | 0.00 | 2.273 | 7.83 | 3.06 | 4.5 | 95.3 | 0.1 | -0.64 | 0.46 | 0.45 | 0.85 | 4.62 | 6004 | 759 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JJP | 22358 | 2022-05-17 | 2020-07-27 | 1.94 | 2.15 | 2.08 | 2.1 | 0.011 | 0.87 | 0.0 | 0.07 | 13.34 | 0.01 | 2.228 | 2.51 | 0.56 | 1.6 | 98.4 | 0.0 | 0.39 | 0.71 | 0.85 | 5.30 | 2.1 | 0.004 | 0.58 | 0.0 | 0.04 | 14.55 | 0.00 | 2.082 | 6.69 | 0.79 | 2.0 | 98.0 | 0.0 | 3.29 | 0.94 | 0.72 | 0.88 | 4.96 | 40920 | 2352 | 36 | 0 | 180 | 396 | 19104 | logfile |
✔ | 6ZKL | 11253 | 2022-05-14 | 2020-06-30 | 3.1 | 2.15 | — | 2.2 | 0.006 | 1.01 | 0.0 | 1.03 | 11.79 | 0.01 | 2.242 | 5.77 | 0.07 | 3.9 | 96.1 | 0.0 | -2.99 | 0.56 | 0.74 | 3.16 | 2.1 | 0.011 | 1.71 | 1.0 | 0.31 | 16.14 | 0.01 | 1.814 | 16.89 | 0.08 | 4.3 | 95.7 | 0.0 | 0.05 | 0.70 | 0.56 | 0.75 | 2.79 | 67492 | 8162 | 71 | 0 | 47 | 0 | 0 | logfile |
✘ | 7oSE | 13048 | 2022-05-13 | 2021-06-08 | 3.0 | 2.15 | — | 3.3 | 0.003 | 0.50 | 0.0 | 0.04 | 13.18 | 0.00 | 1.207 | 8.86 | 0.66 | 1.8 | 98.2 | 0.0 | 2.38 | 0.60 | 0.78 | 2.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14882 | 1816 | 12 | 0 | 10 | 2 | 0 | logfile |
✔ | 7N5E | 24187 | 2022-05-14 | 2021-06-05 | 2.8 | 2.16 | 2.68 | 1.5 | 0.023 | 1.54 | 0.0 | 0.09 | 10.26 | 0.01 | 2.378 | 0.46 | 0.00 | 1.2 | 98.8 | 0.0 | 1.87 | 0.80 | 0.80 | 4.07 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 16.12 | 0.00 | 2.139 | 6.42 | 1.25 | 2.0 | 98.0 | 0.0 | 2.79 | 0.58 | 0.77 | 0.78 | 3.12 | 17915 | 2176 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7N5G | 24189 | 2022-05-12 | 2021-06-05 | 2.4 | 2.16 | 2.42 | 1.5 | 0.022 | 1.51 | 0.0 | 0.09 | 10.57 | 0.01 | 2.386 | 0.34 | 0.00 | 0.8 | 99.2 | 0.0 | 1.84 | 0.40 | 0.79 | 3.64 | 1.5 | 0.003 | 0.56 | 0.0 | 0.04 | 16.74 | 0.00 | 2.228 | 4.78 | 2.28 | 1.4 | 98.6 | 0.0 | 2.95 | 1.21 | 0.39 | 0.80 | 2.58 | 2926 | 371 | 1 | 0 | 1 | 0 | 0 | logfile |