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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6CVM | 7770 | 2022-05-17 | 2018-03-28 | 1.9 | 2.49 | 1.94 | 2.3 | 0.012 | 0.92 | 0.0 | 0.07 | 10.17 | 0.01 | 2.053 | 3.98 | 0.00 | 2.7 | 97.3 | 0.0 | -1.16 | 0.81 | 0.91 | 7.66 | 2.3 | 0.005 | 0.63 | 0.0 | 0.05 | 13.84 | 0.00 | 1.973 | 6.97 | 0.69 | 2.2 | 97.8 | 0.0 | 0.70 | 0.37 | 0.85 | 0.94 | 6.94 | 37062 | 4084 | 12 | 0 | 20 | 4194 | 0 | logfile |
✔ | 7MBX | 23749 | 2022-05-12 | 2021-04-01 | 1.95 | 2.56 | 1.94 | 2.4 | 0.006 | 0.87 | 1.0 | 0.16 | 12.33 | 0.01 | 2.287 | 2.46 | 0.45 | 1.5 | 98.5 | 0.0 | -0.11 | 0.72 | 0.86 | 4.55 | 2.3 | 0.004 | 0.74 | 0.0 | 0.07 | 15.38 | 0.00 | 2.157 | 6.37 | 1.00 | 1.2 | 98.8 | 0.0 | 1.54 | 0.53 | 0.72 | 0.88 | 4.51 | 8433 | 1065 | 11 | 0 | 2 | 61 | 0 | logfile |
✔ | 6QJM | 4564 | 2022-05-12 | 2019-01-24 | 3.3 | 3.49 | 1.95 | 3.4 | 0.010 | 1.01 | 0.0 | 0.07 | 8.06 | 0.01 | 2.408 | 6.17 | 0.00 | 9.1 | 90.9 | 0.0 | -2.36 | 0.38 | 0.76 | 3.31 | 3.5 | 0.003 | 0.58 | 0.0 | 0.06 | 13.83 | 0.00 | 2.178 | 4.49 | 0.00 | 5.1 | 94.9 | 0.0 | -2.27 | 1.60 | 0.34 | 0.74 | 3.53 | 846 | 111 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZRF | 11380 | 2022-05-12 | 2020-07-13 | 3.6 | 3.66 | 1.96 | 3.6 | 0.014 | 1.03 | 0.0 | 0.05 | 13.43 | 0.00 | 1.993 | 42.14 | 0.00 | 4.9 | 95.1 | 0.0 | -6.22 | 0.67 | 0.79 | 1.84 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 14.44 | 0.00 | 2.284 | 18.31 | 0.42 | 10.6 | 89.4 | 0.0 | -5.84 | 0.52 | 0.69 | 0.81 | 3.45 | 2220 | 300 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKL | 14046 | 2022-05-12 | 2021-12-17 | 2.07 | 2.04 | 1.98 | 2.0 | 0.011 | 2.37 | 0.0 | 0.25 | 12.79 | 0.01 | 2.537 | 0.71 | 0.00 | 3.6 | 96.4 | 0.0 | -1.75 | 0.40 | 0.83 | 7.75 | 2.0 | 0.005 | 0.71 | 0.0 | 0.05 | 17.30 | 0.00 | 2.476 | 5.23 | 0.25 | 2.7 | 97.3 | 0.0 | -1.26 | 2.03 | 0.45 | 0.91 | 8.23 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7STW | 25437 | 2022-05-14 | 2021-11-15 | 2.37 | 2.44 | 1.98 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 12.97 | 0.00 | 1.947 | 2.01 | 0.00 | 1.2 | 98.8 | 0.0 | 0.17 | 0.74 | 0.80 | 2.93 | 2.4 | 0.003 | 0.54 | 0.0 | 0.04 | 17.56 | 0.00 | 2.051 | 4.48 | 1.16 | 1.8 | 98.2 | 0.0 | 3.01 | 0.62 | 0.76 | 0.83 | 2.27 | 16829 | 2040 | 36 | 0 | 24 | 257 | 0 | logfile |
✔ | 6YL3 | 10835 | 2022-05-22 | 2020-04-06 | 1.98 | 2.04 | 1.99 | 2.0 | 0.067 | 3.60 | 246.0 | 0.36 | 16.35 | 0.02 | 1.877 | 4.58 | 2.74 | 5.3 | 94.4 | 0.4 | -2.46 | 0.78 | 0.83 | 6.40 | 2.0 | 0.005 | 0.78 | 0.0 | 0.05 | 16.28 | 0.01 | 1.724 | 5.71 | 1.55 | 4.1 | 95.8 | 0.1 | -0.22 | 0.53 | 0.81 | 0.86 | 7.04 | 150156 | 9552 | 84 | 0 | 24 | 3672 | 73044 | logfile |
✔ | 6GKM | 0024 | 2022-05-13 | 2018-05-21 | 3.87 | 4.07 | 2.00 | 4.0 | 0.007 | 0.98 | 0.0 | 0.05 | 10.31 | 0.00 | 2.134 | 11.46 | 0.16 | 9.7 | 90.2 | 0.1 | -3.66 | 0.63 | 0.81 | 2.22 | 4.0 | 0.003 | 0.73 | 0.0 | 0.04 | 13.77 | 0.00 | 2.101 | 21.60 | 0.16 | 8.8 | 91.2 | 0.0 | -0.36 | 1.48 | 0.62 | 0.82 | 2.37 | 10562 | 689 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 7VD8 | 31910 | 2022-05-17 | 2021-09-06 | 1.96 | 1.42 | 2.01 | 1.7 | 0.002 | 0.54 | 0.0 | 0.04 | 16.17 | 0.00 | 2.013 | 3.17 | 0.03 | 2.2 | 97.8 | 0.0 | 5.39 | 0.75 | 0.80 | 7.92 | 1.7 | 0.002 | 0.55 | 0.0 | 0.04 | 16.50 | 0.00 | 2.001 | 2.61 | 0.05 | 1.5 | 98.5 | 0.0 | 5.41 | 0.23 | 0.72 | 0.78 | 8.03 | 38201 | 4128 | 72 | 0 | 329 | 2472 | 0 | logfile |
✔ | 6SAG | 10130 | 2022-05-12 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 12.99 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | 2.1 | 0.004 | 0.63 | 0.0 | 0.04 | 15.40 | 0.01 | 2.054 | 3.11 | 1.17 | 3.1 | 96.9 | 0.0 | 1.56 | 0.73 | 0.60 | 0.89 | 6.90 | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |
✘ | 7D1U | 30548 | 2022-05-18 | 2020-09-15 | 2.08 | 1.94 | 2.04 | 2.0 | 0.018 | 1.83 | 27.0 | 0.10 | 18.50 | 0.02 | 1.202 | 4.10 | 3.09 | 2.3 | 97.5 | 0.2 | -1.36 | 0.74 | 0.87 | 6.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52655 | 5312 | 106 | 0 | 196 | 2121 | 0 | logfile |
✔ | 6RiU | 4898 | 2022-05-12 | 2019-04-25 | 3.9 | 6.21 | 2.04 | 7.0 | 0.008 | 1.19 | 0.0 | 0.09 | 15.19 | 0.01 | 2.182 | 5.20 | 0.00 | 8.4 | 91.6 | 0.0 | -5.77 | 0.59 | 0.69 | 0.56 | 7.1 | 0.003 | 0.67 | 0.0 | 0.03 | 16.53 | 0.00 | 2.057 | 13.17 | 0.00 | 5.1 | 94.9 | 0.0 | -0.39 | 1.43 | 0.61 | 0.75 | 1.30 | 2882 | 182 | 2 | 0 | 0 | 0 | 1430 | logfile |
✘ | 7oY2 | 13108 | 2022-05-12 | 2021-06-23 | 2.06 | 2.12 | 2.05 | 2.2 | 0.006 | 0.92 | 1.0 | 0.05 | 15.87 | 0.01 | 1.171 | 13.44 | 0.42 | 0.8 | 99.2 | 0.0 | 1.10 | 0.77 | 0.84 | 5.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7166 | 858 | 7 | 0 | 7 | 24 | 0 | logfile |
✔ | 6A6B | 6988 | 2022-05-12 | 2018-06-27 | 3.07 | 3.41 | 2.07 | 3.4 | 0.006 | 1.07 | 0.0 | 0.07 | 7.61 | 0.00 | 2.263 | 7.15 | 0.00 | 11.3 | 88.7 | 0.0 | -3.85 | 0.53 | 0.71 | 3.91 | 3.4 | 0.007 | 0.80 | 0.0 | 0.05 | 13.63 | 0.00 | 2.135 | 20.16 | 1.11 | 10.7 | 89.3 | 0.0 | -3.01 | 2.16 | 0.52 | 0.71 | 3.25 | 5256 | 756 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKH | 14042 | 2022-05-12 | 2021-12-17 | 3.17 | 3.37 | 2.07 | 3.5 | 0.011 | 2.48 | 5.0 | 0.19 | 15.22 | 0.01 | 2.470 | 2.26 | 0.00 | 14.6 | 85.4 | 0.0 | -3.56 | 0.37 | 0.74 | 3.98 | 3.5 | 0.004 | 0.97 | 0.0 | 0.22 | 15.37 | 0.00 | 2.116 | 8.71 | 0.00 | 6.8 | 93.2 | 0.0 | -2.57 | 2.30 | 0.31 | 0.69 | 4.34 | 3105 | 204 | 6 | 0 | 0 | 0 | 1593 | logfile |
✔ | 6WX6 | 21951 | 2022-05-14 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.004 | 0.55 | 0.0 | 0.04 | 16.24 | 0.00 | 2.003 | 3.40 | 0.69 | 1.2 | 98.8 | 0.0 | 4.62 | 0.53 | 0.78 | 0.90 | 7.39 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |
✔ | 7JJP | 22358 | 2022-05-17 | 2020-07-27 | 1.94 | 2.15 | 2.08 | 2.1 | 0.011 | 0.87 | 0.0 | 0.07 | 13.34 | 0.01 | 2.228 | 2.51 | 0.56 | 1.6 | 98.4 | 0.0 | 0.39 | 0.71 | 0.85 | 5.30 | 2.1 | 0.004 | 0.58 | 0.0 | 0.04 | 14.55 | 0.00 | 2.082 | 6.69 | 0.79 | 2.0 | 98.0 | 0.0 | 3.29 | 0.94 | 0.72 | 0.88 | 4.96 | 40920 | 2352 | 36 | 0 | 180 | 396 | 19104 | logfile |
✔ | 7S1M | 24805 | 2022-05-13 | 2021-09-02 | 2.41 | 2.95 | 2.08 | 2.8 | 0.003 | 0.51 | 1.0 | 0.04 | 13.54 | 0.00 | 2.233 | 5.11 | 0.10 | 1.9 | 98.1 | 0.0 | 1.84 | 0.81 | 0.87 | 3.93 | 2.8 | 0.003 | 0.52 | 1.0 | 0.04 | 15.94 | 0.00 | 2.177 | 5.61 | 0.84 | 1.7 | 98.3 | 0.0 | 1.83 | 0.91 | 0.77 | 0.87 | 3.79 | 9160 | 1168 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6ZJA | 11233 | 2022-05-15 | 2020-06-28 | 2.0 | 2.10 | 2.09 | 2.1 | 0.006 | 0.86 | 0.0 | 0.06 | 14.19 | 0.01 | 1.974 | 0.84 | 1.37 | 4.1 | 95.9 | 0.0 | -0.40 | 0.79 | 0.87 | 6.97 | 2.1 | 0.004 | 0.72 | 0.0 | 0.05 | 15.95 | 0.01 | 1.820 | 1.85 | 0.56 | 4.3 | 95.7 | 0.0 | 0.02 | 0.39 | 0.78 | 0.89 | 6.77 | 77951 | 9684 | 60 | 0 | 36 | 3191 | 0 | logfile |
✔ | 6SK0 | 10219 | 2022-05-12 | 2019-08-14 | 2.3 | 2.30 | 2.11 | 2.2 | 0.008 | 0.74 | 0.0 | 0.05 | 15.85 | 0.00 | 2.202 | 9.23 | 0.97 | 3.3 | 96.7 | 0.0 | -1.30 | 0.70 | 0.83 | 6.89 | 2.2 | 0.005 | 0.72 | 0.0 | 0.05 | 17.22 | 0.00 | 2.164 | 10.52 | 0.65 | 4.5 | 95.5 | 0.0 | -1.28 | 1.50 | 0.80 | 0.90 | 6.82 | 5826 | 792 | 3 | 0 | 0 | 0 | 0 | logfile |