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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QKZ | 14058 | 2023-02-16 | 2021-12-19 | 2.65 | 2.79 | 2.28 | 3.2 | 0.013 | 2.86 | 9.0 | 0.34 | 18.75 | 0.02 | 2.498 | 0.59 | 0.00 | 9.9 | 90.1 | 0.0 | -1.61 | 0.34 | 0.61 | 7.02 | 2.7 | 0.006 | 1.50 | 0.0 | 0.38 | 19.60 | 0.01 | 2.257 | 11.23 | 0.00 | 1.2 | 98.8 | 0.0 | -0.53 | 5.08 | 0.34 | 0.64 | 6.63 | 1701 | 99 | 9 | 0 | 0 | 0 | 891 | logfile |
✔ | 7VD9 | 31911 | 2023-02-22 | 2021-09-06 | 2.29 | 1.75 | 2.28 | 1.8 | 0.002 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.194 | 7.80 | 2.33 | 3.8 | 96.2 | 0.0 | 0.41 | 0.58 | 0.72 | 3.68 | 1.8 | 0.003 | 0.57 | 0.0 | 0.04 | 17.52 | 0.01 | 2.206 | 7.90 | 2.62 | 3.9 | 96.1 | 0.0 | 0.00 | 0.30 | 0.58 | 0.73 | 3.61 | 16426 | 1991 | 8 | 0 | 8 | 0 | 0 | logfile |
✘ | 7P13 | 13154 | 2023-02-21 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 8E3X | 27872 | 2023-02-18 | 2022-08-17 | 2.3 | 3.02 | 2.29 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.02 | 0.00 | 2.239 | 5.84 | 0.00 | 2.1 | 97.9 | 0.0 | 1.49 | 0.70 | 0.82 | 3.16 | 2.8 | 0.003 | 0.53 | 0.0 | 0.04 | 15.31 | 0.00 | 2.206 | 5.61 | 0.84 | 2.1 | 97.9 | 0.0 | 1.71 | 0.97 | 0.75 | 0.89 | 3.61 | 8979 | 1140 | 8 | 0 | 0 | 11 | 0 | logfile |
✔ | 7S3i | 24825 | 2023-02-18 | 2021-09-07 | 2.51 | 2.95 | 2.29 | 2.8 | 0.002 | 0.44 | 0.0 | 0.04 | 13.63 | 0.00 | 2.088 | 5.73 | 0.00 | 2.1 | 97.9 | 0.0 | 1.36 | 0.80 | 0.87 | 3.90 | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.13 | 0.00 | 2.094 | 5.73 | 1.15 | 1.8 | 98.2 | 0.0 | 1.82 | 0.93 | 0.76 | 0.88 | 3.50 | 8094 | 1023 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SQV | 25396 | 2023-02-17 | 2021-11-06 | 2.3 | 2.95 | 2.29 | 2.8 | 0.001 | 0.38 | 0.0 | 0.04 | 16.08 | 0.00 | 2.314 | 1.47 | 0.63 | 0.7 | 99.3 | 0.0 | 1.86 | 0.76 | 0.88 | 3.59 | 2.8 | 0.003 | 0.47 | 0.0 | 0.04 | 16.30 | 0.00 | 2.295 | 1.36 | 1.67 | 1.1 | 98.9 | 0.0 | 1.71 | 1.99 | 0.77 | 0.90 | 3.84 | 4471 | 573 | 5 | 0 | 0 | 7 | 0 | logfile |
✔ | 6UUS | 20901 | 2023-02-19 | 2019-10-31 | 2.4 | 2.10 | 2.30 | 2.4 | 0.002 | 0.50 | 0.0 | 0.04 | 17.13 | 0.00 | 2.214 | 7.45 | 3.27 | 2.8 | 97.2 | 0.0 | -2.25 | 0.57 | 0.73 | 3.22 | 2.3 | 0.003 | 0.58 | 0.0 | 0.04 | 17.74 | 0.00 | 2.183 | 9.20 | 1.84 | 3.6 | 96.4 | 0.0 | 0.64 | 1.01 | 0.63 | 0.78 | 3.41 | 9308 | 1190 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UZU | 26918 | 2023-02-18 | 2022-05-09 | 2.3 | 2.23 | 2.31 | 2.2 | 0.003 | 0.57 | 0.0 | 0.04 | 17.47 | 0.01 | 2.124 | 3.14 | 0.52 | 3.1 | 96.9 | 0.0 | 1.73 | 0.60 | 0.87 | 5.53 | 2.2 | 0.003 | 0.52 | 0.0 | 0.04 | 17.57 | 0.00 | 2.102 | 3.83 | 0.78 | 4.0 | 96.0 | 0.0 | 2.44 | 0.18 | 0.59 | 0.87 | 5.51 | 7399 | 483 | 4 | 0 | 0 | 79 | 3655 | logfile |
✔ | 6UVA | 20906 | 2023-02-19 | 2019-11-01 | 2.3 | 2.12 | 2.31 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 18.04 | 0.00 | 2.207 | 6.60 | 3.36 | 3.2 | 96.8 | 0.0 | -2.29 | 0.63 | 0.72 | 2.83 | 2.3 | 0.003 | 0.63 | 0.0 | 0.04 | 18.40 | 0.00 | 2.148 | 9.03 | 3.26 | 4.6 | 95.4 | 0.0 | 0.18 | 1.31 | 0.66 | 0.79 | 2.96 | 9561 | 1199 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E3Y | 27873 | 2023-02-18 | 2022-08-17 | 2.3 | 2.68 | 2.31 | 2.6 | 0.003 | 0.60 | 0.0 | 0.05 | 12.65 | 0.00 | 2.237 | 5.72 | 0.11 | 2.0 | 98.0 | 0.0 | 1.26 | 0.72 | 0.85 | 4.19 | 2.6 | 0.003 | 0.54 | 0.0 | 0.04 | 15.61 | 0.00 | 2.222 | 8.10 | 0.42 | 1.9 | 98.1 | 0.0 | 1.94 | 0.80 | 0.74 | 0.88 | 4.23 | 8966 | 1139 | 8 | 0 | 0 | 14 | 0 | logfile |
✔ | 6XYo | 10650 | 2023-02-17 | 2020-01-30 | 2.6 | 2.79 | 2.31 | 2.7 | 0.008 | 0.74 | 0.0 | 0.06 | 12.93 | 0.00 | 2.300 | 5.78 | 0.93 | 2.6 | 97.4 | 0.0 | -2.90 | 0.46 | 0.89 | 5.98 | 2.7 | 0.007 | 0.62 | 0.0 | 0.05 | 17.92 | 0.00 | 2.105 | 4.45 | 2.22 | 4.4 | 95.6 | 0.0 | -1.84 | 0.96 | 0.48 | 0.91 | 4.74 | 5490 | 800 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QJP | 4565 | 2023-02-16 | 2019-01-24 | 3.5 | 3.64 | 2.32 | 4.1 | 0.009 | 1.01 | 0.0 | 0.07 | 9.52 | 0.01 | 2.605 | 1.16 | 0.00 | 3.2 | 96.8 | 0.0 | -2.50 | 0.37 | 0.74 | 3.05 | 4.2 | 0.004 | 0.77 | 0.0 | 0.05 | 12.80 | 0.00 | 2.338 | 11.00 | 0.00 | 4.3 | 95.7 | 0.0 | -3.48 | 1.60 | 0.32 | 0.73 | 4.73 | 816 | 105 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XMU | 33305 | 2023-02-21 | 2022-04-26 | 2.3 | 2.51 | 2.33 | 2.5 | 0.016 | 0.90 | 0.0 | 0.05 | 17.56 | 0.04 | 1.897 | 4.23 | 1.57 | 2.6 | 97.4 | 0.0 | -0.10 | 0.75 | 0.87 | 4.86 | 2.5 | 0.003 | 1.81 | 0.0 | 0.04 | 17.21 | 0.00 | 1.872 | 4.69 | 0.46 | 2.6 | 97.4 | 0.0 | 0.29 | 1.11 | 0.77 | 0.88 | 4.57 | 15294 | 1842 | 18 | 0 | 36 | 822 | 0 | logfile |
✔ | 6SDZ | 10150 | 2023-02-18 | 2019-07-29 | 2.97 | 3.77 | 2.34 | 3.5 | 0.009 | 1.13 | 0.0 | 0.08 | 12.17 | 0.01 | 2.263 | 27.39 | 0.12 | 5.5 | 94.5 | 0.0 | -3.05 | 0.89 | 0.88 | 3.72 | 3.4 | 0.006 | 1.19 | 0.0 | 0.06 | 15.81 | 0.01 | 2.127 | 29.73 | 2.91 | 6.6 | 93.4 | 0.0 | -3.27 | 1.94 | 0.85 | 0.86 | 3.90 | 7909 | 1012 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R06 | 14220 | 2023-02-23 | 2022-02-01 | 2.27 | 2.36 | 2.34 | 2.3 | 0.007 | 0.85 | 6.0 | 0.06 | 20.28 | 0.01 | 2.153 | 12.58 | 5.53 | 1.2 | 98.6 | 0.2 | 0.06 | 0.74 | 0.80 | 4.13 | 2.3 | 0.008 | 0.74 | 0.0 | 0.05 | 19.63 | 0.01 | 2.143 | 7.49 | 3.03 | 1.6 | 98.3 | 0.2 | 0.51 | 0.52 | 0.78 | 0.85 | 4.66 | 31320 | 3588 | 12 | 66 | 0 | 0 | 0 | logfile |
✔ | 8B64 | 15862 | 2023-02-23 | 2022-09-26 | 2.589 | 2.35 | 2.34 | 2.5 | 0.020 | 4.46 | 0.0 | 0.04 | 20.81 | 0.00 | 1.980 | 8.44 | 1.19 | 0.8 | 99.2 | 0.0 | 3.50 | 0.67 | 0.88 | 4.98 | 2.5 | 0.004 | 1.15 | 0.0 | 0.04 | 19.92 | 0.00 | 1.956 | 7.44 | 1.57 | 1.1 | 98.9 | 0.0 | 2.97 | 0.89 | 0.67 | 0.90 | 4.87 | 21678 | 2249 | 66 | 0 | 75 | 0 | 0 | logfile |
✔ | 7UZ3 | 26874 | 2023-02-22 | 2022-05-08 | 2.35 | 2.21 | 2.35 | 2.2 | 0.005 | 0.80 | 0.0 | 0.08 | 17.05 | 0.01 | 2.063 | 2.87 | 0.84 | 2.2 | 97.8 | 0.0 | 1.74 | 0.62 | 0.87 | 5.34 | 2.2 | 0.003 | 0.53 | 0.0 | 0.04 | 16.55 | 0.00 | 2.107 | 6.11 | 0.63 | 2.2 | 97.8 | 0.0 | 1.87 | 0.28 | 0.63 | 0.87 | 5.22 | 18415 | 1114 | 10 | 0 | 20 | 153 | 9100 | logfile |
✔ | 8DCP | 27327 | 2023-02-19 | 2022-06-17 | 2.41 | 2.31 | 2.35 | 2.3 | 0.003 | 0.64 | 0.0 | 0.04 | 20.07 | 0.00 | 2.253 | 7.28 | 3.06 | 4.3 | 95.7 | 0.0 | 0.79 | 0.68 | 0.82 | 3.67 | 2.3 | 0.003 | 0.65 | 0.0 | 0.04 | 20.16 | 0.00 | 2.247 | 9.27 | 3.40 | 4.6 | 95.4 | 0.0 | 0.92 | 0.25 | 0.70 | 0.85 | 3.50 | 10595 | 1281 | 4 | 0 | 0 | 21 | 0 | logfile |
✔ | 7QK3 | 14030 | 2023-02-16 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.72 | 0.0 | 0.05 | 16.27 | 0.00 | 2.309 | 2.92 | 0.64 | 2.8 | 97.2 | 0.0 | -2.78 | 2.36 | 0.39 | 0.82 | 5.18 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 7SSS | 25413 | 2023-02-22 | 2021-11-11 | 2.4 | 2.00 | 2.36 | 2.4 | 0.006 | 0.66 | 0.0 | 0.04 | 14.29 | 0.02 | 2.323 | 3.55 | 0.00 | 2.4 | 97.6 | 0.0 | 0.01 | 0.59 | 0.78 | 4.08 | 2.3 | 0.003 | 0.61 | 0.0 | 0.04 | 17.86 | 0.00 | 2.126 | 10.16 | 2.41 | 3.9 | 96.1 | 0.0 | 2.31 | 0.59 | 0.60 | 0.78 | 3.63 | 12190 | 1416 | 24 | 0 | 38 | 170 | 0 | logfile |