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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7ZYY | 15028 | 2024-03-22 | 2022-05-25 | 2.12 | 2.40 | 2.14 | 2.1 | 0.007 | 0.89 | 0.0 | 0.05 | 17.50 | 0.00 | 2.008 | 4.42 | 1.19 | 2.4 | 97.6 | 0.0 | -0.65 | 0.91 | 0.89 | 4.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33924 | 4224 | 12 | 0 | 28 | 324 | 0 | logfile |
✔ | 7P6B | 13224 | 2024-03-10 | 2021-07-15 | 2.2 | 1.98 | 2.14 | 2.1 | 0.004 | 0.75 | 0.0 | 0.09 | 13.80 | 0.01 | 2.246 | 4.21 | 0.00 | 3.8 | 96.2 | 0.0 | -2.60 | 0.48 | 0.85 | 6.24 | 2.0 | 0.003 | 0.62 | 0.0 | 0.05 | 17.14 | 0.00 | 2.160 | 6.37 | 1.51 | 4.5 | 95.5 | 0.0 | -2.28 | 0.88 | 0.49 | 0.88 | 6.71 | 4060 | 540 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 8BQW | 16189 | 2024-03-17 | 2023-01-18 | 2.3 | 2.12 | 2.14 | 2.2 | 0.008 | 1.14 | 0.0 | 0.07 | 8.96 | 0.00 | 0.052 | 12.77 | 0.00 | 9.6 | 90.4 | 0.0 | -3.78 | 0.46 | 0.75 | 7.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17385 | 2310 | 90 | 0 | 270 | 135 | 0 | logfile |
✔ | 7TYF | 26178 | 2024-03-15 | 2022-02-13 | 2.2 | 2.16 | 2.14 | 2.2 | 0.004 | 0.57 | 0.0 | 0.04 | 14.57 | 0.00 | 2.234 | 4.87 | 0.87 | 1.8 | 98.2 | 0.0 | -1.73 | 0.64 | 0.82 | 5.12 | 2.2 | 0.002 | 0.57 | 0.0 | 0.04 | 15.78 | 0.00 | 2.223 | 5.86 | 1.55 | 2.1 | 97.9 | 0.0 | 1.19 | 0.46 | 0.66 | 0.86 | 4.34 | 10331 | 1266 | 12 | 0 | 16 | 83 | 0 | logfile |
✔ | 8iJV | 35500 | 2024-03-15 | 2023-02-28 | 2.1 | 2.26 | 2.14 | 2.3 | 0.008 | 1.11 | 0.0 | 0.07 | 20.13 | 0.01 | 1.973 | 7.26 | 2.73 | 2.1 | 97.9 | 0.0 | 1.17 | 0.62 | 0.83 | 5.35 | 2.3 | 0.003 | 0.69 | 0.0 | 0.06 | 19.45 | 0.00 | 1.970 | 5.20 | 2.16 | 2.0 | 98.0 | 0.0 | 1.24 | 0.77 | 0.64 | 0.85 | 5.32 | 10532 | 1251 | 6 | 0 | 12 | 369 | 0 | logfile |
✔ | 8G71 | 29793 | 2024-03-20 | 2023-02-16 | 2.1 | 2.20 | 2.14 | 2.2 | 0.003 | 0.64 | 0.0 | 0.05 | 15.87 | 0.00 | 2.055 | 8.42 | 2.27 | 2.9 | 97.1 | 0.1 | -0.70 | 0.64 | 0.78 | 4.01 | 2.2 | 0.005 | 0.70 | 0.0 | 0.05 | 16.08 | 0.00 | 2.098 | 7.66 | 2.84 | 4.0 | 96.0 | 0.0 | -0.42 | 0.36 | 0.64 | 0.85 | 3.97 | 25761 | 3217 | 17 | 0 | 45 | 0 | 0 | logfile |
✔ | 7YPQ | 34011 | 2024-03-10 | 2022-08-04 | 3.1 | 3.22 | 2.15 | 3.2 | 0.005 | 0.63 | 0.0 | 0.05 | 17.79 | 0.00 | 2.261 | 7.93 | 0.00 | 2.2 | 97.8 | 0.0 | -0.66 | 0.52 | 0.79 | 2.67 | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 19.43 | 0.00 | 2.236 | 7.75 | 2.26 | 1.5 | 98.5 | 0.0 | 0.08 | 0.30 | 0.52 | 0.80 | 2.22 | 2915 | 327 | 2 | 11 | 0 | 0 | 0 | logfile |
✔ | 7KJR | 22898 | 2024-03-10 | 2020-10-26 | 2.08 | 2.52 | 2.15 | 2.4 | 0.006 | 0.84 | 0.0 | 0.05 | 19.50 | 0.00 | 2.254 | 7.60 | 0.25 | 1.8 | 98.2 | 0.0 | 1.13 | 0.68 | 0.87 | 5.29 | 2.4 | 0.003 | 0.52 | 0.0 | 0.04 | 17.36 | 0.00 | 2.247 | 10.31 | 0.99 | 2.3 | 97.7 | 0.0 | 1.32 | 0.26 | 0.66 | 0.87 | 4.55 | 3840 | 448 | 8 | 0 | 2 | 122 | 0 | logfile |
✔ | 7SCA | 25031 | 2024-03-11 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 14.95 | 0.01 | 2.057 | 5.44 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.11 | 0.00 | 2.149 | 8.14 | 1.25 | 1.0 | 99.0 | 0.0 | 2.73 | 1.09 | 0.79 | 0.85 | 5.36 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 7YNP | 33968 | 2024-03-10 | 2022-07-31 | 2.8 | 2.38 | 2.15 | 3.4 | 0.012 | 0.97 | 0.0 | 0.06 | 13.69 | 0.00 | 2.265 | 10.48 | 0.00 | 6.5 | 93.5 | 0.0 | -3.88 | 0.39 | 0.78 | 4.28 | 3.5 | 0.006 | 0.61 | 0.0 | 0.05 | 15.54 | 0.00 | 2.173 | 7.81 | 5.04 | 6.8 | 93.2 | 0.0 | -2.51 | 1.78 | 0.34 | 0.80 | 4.03 | 2568 | 366 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 7o6E | 12738 | 2024-03-23 | 2021-04-10 | 2.1 | 1.78 | 2.15 | 1.6 | 0.017 | 1.10 | 0.0 | 0.07 | 18.13 | 0.01 | 2.110 | 3.49 | 0.00 | 2.3 | 97.7 | 0.0 | 2.10 | 0.87 | 0.88 | 6.02 | 1.6 | 0.003 | 0.47 | 0.0 | 0.03 | 18.19 | 0.00 | 2.218 | 3.52 | 0.58 | 0.5 | 99.5 | 0.0 | 4.44 | 0.29 | 0.88 | 0.89 | 5.30 | 35304 | 4248 | 48 | 0 | 0 | 1392 | 0 | logfile |
✔ | 8BC4 | 15962 | 2024-03-17 | 2022-10-14 | 2.7 | 2.11 | 2.15 | 2.5 | 0.015 | 2.14 | 1.0 | 0.11 | 19.24 | 0.02 | 2.310 | 4.45 | 10.79 | 4.1 | 95.8 | 0.0 | -4.88 | 0.59 | 0.76 | 3.14 | 2.5 | 0.004 | 0.64 | 0.0 | 0.05 | 17.66 | 0.00 | 2.105 | 5.75 | 2.43 | 1.2 | 98.8 | 0.0 | 0.58 | 0.64 | 0.61 | 0.79 | 3.97 | 16440 | 2167 | 29 | 0 | 9 | 270 | 0 | logfile |
✔ | 8iRU | 35686 | 2024-03-17 | 2023-03-19 | 3.2 | 3.42 | 2.15 | 3.3 | 0.013 | 1.78 | 5.0 | 0.10 | 12.62 | 0.02 | 2.528 | 0.83 | 0.00 | 3.4 | 96.6 | 0.0 | -0.54 | 0.66 | 0.76 | 3.92 | 3.3 | 0.005 | 0.62 | 0.0 | 0.04 | 14.46 | 0.00 | 1.887 | 11.52 | 2.01 | 3.8 | 96.2 | 0.0 | 0.79 | 1.45 | 0.67 | 0.81 | 2.78 | 17655 | 1123 | 5 | 0 | 10 | 0 | 8649 | logfile |
✔ | 8Q8R | 18258 | 2024-03-10 | 2023-08-18 | 2.1 | 1.89 | 2.15 | 1.9 | 0.011 | 1.82 | 6.0 | 0.10 | 11.11 | 0.01 | 2.505 | 0.00 | 0.00 | 11.0 | 89.0 | 0.0 | -1.41 | 0.39 | 0.83 | 5.91 | 1.9 | 0.007 | 0.86 | 0.0 | 0.06 | 16.75 | 0.00 | 2.274 | 4.81 | 6.06 | 8.6 | 91.4 | 0.0 | -1.70 | 2.41 | 0.46 | 0.88 | 6.08 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FNV | 29327 | 2024-03-16 | 2022-12-28 | 2.11 | 2.24 | 2.15 | 2.2 | 0.007 | 1.36 | 12.0 | 0.07 | 18.52 | 0.02 | 2.014 | 8.59 | 3.84 | 5.7 | 93.5 | 0.8 | 0.03 | 0.71 | 0.82 | 3.84 | 2.2 | 0.003 | 0.62 | 0.0 | 0.04 | 17.95 | 0.00 | 2.066 | 9.09 | 1.40 | 5.2 | 94.3 | 0.5 | 1.22 | 0.47 | 0.74 | 0.87 | 4.17 | 74928 | 9237 | 24 | 0 | 12 | 0 | 0 | logfile |
✔ | 8GHE | 40042 | 2024-03-18 | 2023-03-09 | 2.05 | 2.65 | 2.15 | 2.5 | 0.006 | 0.73 | 0.0 | 0.05 | 12.12 | 0.01 | 2.229 | 4.10 | 0.04 | 1.7 | 98.3 | 0.0 | -0.85 | 0.83 | 0.91 | 5.79 | 2.4 | 0.003 | 0.57 | 0.0 | 0.04 | 14.38 | 0.00 | 2.068 | 9.23 | 0.61 | 1.4 | 98.6 | 0.0 | 1.73 | 0.45 | 0.82 | 0.91 | 5.43 | 22193 | 2648 | 12 | 0 | 5 | 830 | 0 | logfile |
✔ | 7UZQ | 26916 | 2024-03-18 | 2022-05-09 | 2.17 | 2.05 | 2.16 | 2.1 | 0.006 | 0.92 | 0.0 | 0.05 | 17.12 | 0.01 | 2.215 | 4.59 | 2.27 | 1.8 | 98.0 | 0.2 | 2.16 | 0.68 | 0.87 | 5.59 | 2.1 | 0.004 | 0.60 | 0.0 | 0.04 | 15.48 | 0.00 | 2.099 | 5.37 | 2.08 | 2.1 | 97.8 | 0.1 | 1.81 | 0.24 | 0.69 | 0.88 | 5.85 | 20617 | 1315 | 10 | 0 | 4 | 235 | 10214 | logfile |
✔ | 8A2U | 15107 | 2024-03-16 | 2022-06-06 | 2.21 | 2.31 | 2.16 | 2.3 | 0.004 | 0.63 | 0.0 | 0.04 | 13.27 | 0.00 | 2.173 | 2.75 | 0.65 | 2.5 | 97.5 | 0.0 | -1.41 | 0.72 | 0.86 | 6.31 | 2.3 | 0.005 | 0.68 | 0.0 | 0.05 | 16.81 | 0.00 | 2.075 | 4.73 | 1.03 | 1.6 | 98.4 | 0.0 | 0.93 | 1.06 | 0.73 | 0.89 | 6.17 | 15022 | 1830 | 15 | 0 | 15 | 512 | 0 | logfile |
✔ | 8G12 | 29659 | 2024-03-14 | 2023-02-01 | 2.17 | 3.50 | 2.16 | 2.8 | 0.006 | 0.87 | 0.0 | 0.05 | 14.96 | 0.01 | 2.394 | 5.72 | 0.38 | 4.3 | 95.7 | 0.0 | -1.26 | 0.93 | 0.93 | 4.11 | 2.8 | 0.002 | 0.52 | 0.0 | 0.04 | 15.25 | 0.01 | 2.321 | 2.88 | 0.48 | 3.9 | 96.1 | 0.0 | 0.74 | 0.30 | 0.94 | 0.94 | 4.77 | 9980 | 1336 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DQW | 27662 | 2024-03-25 | 2022-07-20 | 2.1 | 2.86 | 2.16 | 2.6 | 0.007 | 0.55 | 0.0 | 0.04 | 18.05 | 0.00 | 1.761 | 3.31 | 0.44 | 1.6 | 98.4 | 0.0 | 2.35 | 0.77 | 0.72 | 3.64 | 2.7 | 0.003 | 0.53 | 0.0 | 0.04 | 17.77 | 0.00 | 1.722 | 3.85 | 1.11 | 1.7 | 98.3 | 0.0 | 2.19 | 2.60 | 0.82 | 0.88 | 3.89 | 46565 | 2802 | 25 | 36 | 8 | 429 | 22936 | logfile |