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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7o6E | 12738 | 2023-11-21 | 2021-04-10 | 2.1 | 1.78 | 2.15 | 1.6 | 0.017 | 1.10 | 0.0 | 0.07 | 18.13 | 0.01 | 2.110 | 3.49 | 0.00 | 2.3 | 97.7 | 0.0 | 2.10 | 0.87 | 0.88 | 6.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35304 | 4248 | 48 | 0 | 0 | 1392 | 0 | logfile |
✔ | 7M4U | 23666 | 2023-11-13 | 2021-03-22 | 2.71 | 1.78 | — | 1.6 | 0.006 | 0.58 | 2.0 | 0.04 | 14.94 | 0.02 | 1.771 | 4.42 | 0.20 | 3.1 | 96.7 | 0.2 | 1.08 | 0.79 | 0.76 | 3.70 | 1.6 | 0.004 | 0.72 | 0.0 | 0.04 | 15.88 | 0.01 | 1.748 | 5.68 | 2.51 | 3.4 | 96.5 | 0.2 | 0.80 | 1.73 | 0.82 | 0.81 | 3.58 | 51764 | 2386 | 27 | 1528 | 84 | 191 | 0 | logfile |
✔ | 8CPM | 16783 | 2023-11-22 | 2023-03-03 | 1.81 | 1.57 | 1.84 | 1.6 | 0.005 | 0.85 | 0.0 | 0.05 | 15.21 | 0.01 | 1.916 | 7.77 | 0.00 | 1.0 | 99.0 | 0.0 | 2.32 | 0.70 | 0.75 | 7.56 | 1.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.38 | 0.00 | 2.043 | 7.22 | 0.11 | 2.3 | 97.7 | 0.0 | 4.30 | 0.37 | 0.71 | 0.77 | 7.46 | 36090 | 4152 | 72 | 0 | 38 | 1972 | 0 | logfile |
✔ | 7YLA | 33904 | 2023-11-17 | 2022-07-25 | 2.52 | 2.04 | 2.52 | 1.6 | 0.006 | 0.71 | 0.0 | 0.04 | 14.58 | 0.01 | 1.980 | 8.85 | 0.75 | 4.3 | 95.5 | 0.3 | -0.94 | 0.81 | 0.81 | 3.97 | 1.6 | 0.005 | 0.57 | 0.0 | 0.04 | 14.96 | 0.00 | 1.883 | 11.63 | 0.85 | 4.8 | 95.2 | 0.1 | -0.72 | 1.10 | 0.83 | 0.84 | 3.60 | 125784 | 3775 | 36 | 2994 | 6 | 0 | 32052 | logfile |
✔ | 7XJG | 33226 | 2023-11-15 | 2022-04-17 | 2.51 | 2.02 | 2.63 | 1.6 | 0.005 | 0.71 | 0.0 | 0.05 | 22.26 | 0.01 | 1.962 | 7.64 | 3.44 | 4.1 | 95.9 | 0.0 | -0.23 | 0.76 | 0.76 | 2.80 | 1.6 | 0.005 | 0.60 | 0.0 | 0.04 | 21.99 | 0.00 | 2.109 | 7.44 | 4.48 | 4.1 | 95.9 | 0.0 | 0.56 | 0.25 | 0.79 | 0.80 | 2.61 | 13167 | 1066 | 12 | 216 | 2 | 0 | 0 | logfile |
✔ | 8CPU | 16786 | 2023-11-21 | 2023-03-03 | 1.76 | 1.54 | 1.80 | 1.6 | 0.004 | 0.71 | 0.0 | 0.05 | 14.91 | 0.01 | 1.976 | 4.95 | 0.00 | 1.0 | 99.0 | 0.0 | 2.29 | 0.71 | 0.77 | 8.55 | 1.6 | 0.004 | 0.62 | 0.0 | 0.04 | 15.65 | 0.00 | 2.051 | 5.31 | 0.57 | 1.8 | 98.2 | 0.0 | 3.90 | 0.29 | 0.73 | 0.80 | 8.29 | 35823 | 4152 | 72 | 0 | 38 | 1705 | 0 | logfile |
✔ | 7M4X | 23669 | 2023-11-20 | 2021-03-22 | 2.66 | 1.75 | — | 1.6 | 0.006 | 0.56 | 0.0 | 0.03 | 15.14 | 0.01 | 1.789 | 3.62 | 0.00 | 2.5 | 97.4 | 0.1 | 1.32 | 0.77 | 0.73 | 3.46 | 1.6 | 0.007 | 0.84 | 0.0 | 0.05 | 16.27 | 0.01 | 1.607 | 5.41 | 2.63 | 3.5 | 96.4 | 0.1 | 0.21 | 0.36 | 0.80 | 0.76 | 3.34 | 139446 | 5528 | 73 | 4453 | 194 | 552 | 0 | logfile |
✔ | 7SiM | 25144 | 2023-11-15 | 2021-10-14 | 2.7 | 2.00 | — | 1.6 | 0.005 | 0.71 | 0.0 | 0.05 | 13.50 | 0.00 | 2.302 | 7.90 | 0.07 | 1.7 | 98.3 | 0.0 | 0.36 | 0.74 | 0.72 | 3.19 | 1.6 | 0.003 | 0.55 | 0.0 | 0.04 | 15.84 | 0.00 | 2.196 | 9.00 | 0.81 | 1.6 | 98.4 | 0.0 | 0.50 | 0.93 | 0.75 | 0.76 | 3.23 | 12826 | 1564 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 8CPX | 16789 | 2023-11-21 | 2023-03-03 | 1.76 | 1.61 | 1.78 | 1.6 | 0.005 | 0.80 | 0.0 | 0.06 | 14.97 | 0.01 | 2.063 | 5.37 | 0.00 | 1.0 | 99.0 | 0.0 | 2.18 | 0.75 | 0.81 | 8.02 | 1.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.88 | 0.00 | 2.212 | 2.81 | 1.31 | 1.8 | 98.2 | 0.0 | 4.58 | 0.39 | 0.78 | 0.85 | 7.90 | 35827 | 4152 | 72 | 0 | 38 | 1709 | 0 | logfile |
✔ | 8D33 | 27154 | 2023-11-16 | 2022-05-31 | 2.46 | 2.01 | 2.48 | 1.7 | 0.003 | 0.55 | 0.0 | 0.04 | 13.00 | 0.00 | 2.091 | 4.01 | 0.39 | 3.5 | 96.5 | 0.1 | 0.90 | 0.73 | 0.78 | 3.10 | 1.7 | 0.003 | 0.60 | 0.0 | 0.04 | 17.93 | 0.00 | 2.187 | 7.22 | 2.65 | 3.1 | 96.9 | 0.0 | 0.83 | 1.32 | 0.73 | 0.79 | 2.85 | 15272 | 1784 | 6 | 46 | 2 | 0 | 0 | logfile |
✔ | 7U9X | 26409 | 2023-11-20 | 2022-03-11 | 2.58 | 2.84 | — | 1.7 | 0.003 | 0.61 | 0.0 | 0.04 | 14.15 | 0.00 | 2.080 | 9.25 | 0.11 | 2.3 | 97.7 | 0.0 | 1.30 | 0.87 | 0.83 | 3.55 | 1.7 | 0.003 | 0.64 | 0.0 | 0.04 | 15.20 | 0.00 | 2.114 | 8.19 | 0.25 | 2.9 | 97.1 | 0.0 | 1.66 | 0.41 | 0.88 | 0.87 | 3.93 | 138588 | 17324 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 8CAM | 16530 | 2023-11-20 | 2023-01-24 | 1.86 | 1.57 | 1.83 | 1.7 | 0.010 | 1.53 | 0.0 | 0.11 | 14.33 | 0.03 | 1.821 | 0.54 | 0.27 | 3.0 | 96.8 | 0.1 | -1.28 | 0.64 | 0.76 | 6.57 | 1.6 | 0.008 | 1.15 | 0.0 | 0.06 | 14.87 | 0.01 | 1.713 | 7.67 | 1.60 | 2.8 | 97.2 | 0.0 | -0.29 | 0.33 | 0.73 | 0.82 | 6.46 | 86648 | 2767 | 65 | 2724 | 322 | 6113 | 0 | logfile |
✘ | 7MW6 | 24064 | 2023-11-21 | 2021-05-15 | 3.22 | 2.55 | — | 1.7 | 0.005 | 0.84 | 1.0 | 0.09 | 12.90 | 0.01 | 1.556 | 11.05 | 0.13 | 5.1 | 94.2 | 0.7 | -1.15 | 0.80 | 0.77 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35247 | 4446 | 45 | 0 | 87 | 0 | 0 | logfile |
✔ | 7S8L | 24896 | 2023-11-14 | 2021-09-18 | 2.45 | 2.08 | 2.46 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 12.22 | 0.00 | 2.238 | 2.45 | 0.00 | 3.5 | 96.5 | 0.0 | 1.27 | 0.81 | 0.80 | 4.28 | 1.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.52 | 0.00 | 2.231 | 3.14 | 1.70 | 3.2 | 96.8 | 0.0 | 1.39 | 0.34 | 0.84 | 0.84 | 3.79 | 8177 | 1096 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FKX | 29260 | 2023-11-20 | 2022-12-21 | 2.59 | 2.79 | 2.72 | 1.7 | 0.003 | 0.55 | 0.0 | 0.04 | 13.14 | 0.00 | 1.961 | 1.77 | 0.01 | 1.2 | 98.8 | 0.0 | 1.69 | 0.79 | 0.82 | 3.59 | 1.7 | 0.004 | 0.53 | 0.0 | 0.04 | 14.22 | 0.00 | 1.883 | 5.27 | 1.32 | 2.1 | 97.9 | 0.0 | 1.75 | 1.14 | 0.80 | 0.87 | 3.18 | 138643 | 10793 | 67 | 2472 | 65 | 0 | 0 | logfile |
✔ | 8HK6 | 34847 | 2023-11-20 | 2022-11-25 | 2.64 | 2.08 | 2.77 | 1.7 | 0.006 | 0.80 | 0.0 | 0.05 | 16.47 | 0.01 | 1.477 | 13.25 | 1.62 | 2.8 | 97.0 | 0.2 | -0.80 | 0.79 | 0.82 | 3.37 | 1.7 | 0.004 | 0.65 | 0.0 | 0.04 | 17.28 | 0.00 | 2.190 | 9.58 | 2.54 | 2.9 | 96.9 | 0.2 | 0.74 | 0.46 | 0.79 | 0.83 | 3.14 | 28704 | 3596 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 8CPW | 16788 | 2023-11-21 | 2023-03-03 | 1.79 | 1.64 | 1.78 | 1.7 | 0.005 | 0.84 | 0.0 | 0.06 | 14.35 | 0.01 | 2.180 | 3.39 | 0.63 | 1.0 | 99.0 | 0.0 | 2.13 | 0.77 | 0.83 | 8.34 | 1.6 | 0.004 | 0.71 | 0.0 | 0.04 | 14.75 | 0.00 | 2.215 | 4.05 | 0.41 | 1.2 | 98.8 | 0.0 | 3.93 | 0.22 | 0.77 | 0.85 | 7.73 | 36004 | 4152 | 72 | 0 | 38 | 1886 | 0 | logfile |
✔ | 6W6P | 21562 | 2023-11-18 | 2020-03-17 | 2.9 | 2.21 | — | 1.7 | 0.010 | 1.07 | 0.0 | 0.06 | 16.55 | 0.01 | 1.989 | 6.48 | 16.52 | 12.1 | 87.6 | 0.3 | -4.00 | 0.77 | 0.84 | 2.96 | 1.6 | 0.004 | 0.72 | 0.0 | 0.04 | 16.07 | 0.01 | 1.983 | 5.80 | 7.99 | 8.9 | 91.0 | 0.1 | -1.84 | 1.60 | 0.79 | 0.86 | 2.61 | 133554 | 5058 | 51 | 4378 | 4 | 0 | 0 | logfile |
✘ | 7P13 | 13154 | 2023-11-16 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 8CPS | 16784 | 2023-11-21 | 2023-03-03 | 1.82 | 1.69 | 1.90 | 1.7 | 0.003 | 0.66 | 0.0 | 0.05 | 15.42 | 0.01 | 2.116 | 2.82 | 0.00 | 1.0 | 99.0 | 0.0 | 2.28 | 0.75 | 0.81 | 8.54 | 1.7 | 0.003 | 0.58 | 0.0 | 0.04 | 17.00 | 0.00 | 2.154 | 4.46 | 0.16 | 1.2 | 98.8 | 0.0 | 4.78 | 0.30 | 0.77 | 0.83 | 8.39 | 36034 | 4152 | 72 | 0 | 38 | 1916 | 0 | logfile |