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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DPF | 27633 | 2023-02-18 | 2022-07-15 | 2.84 | 2.18 | 2.90 | 2.0 | 0.004 | 0.77 | 0.0 | 0.07 | 10.32 | 0.00 | 2.093 | 3.46 | 0.12 | 1.8 | 98.2 | 0.0 | 1.40 | 0.78 | 0.77 | 4.38 | 2.0 | 0.004 | 0.65 | 0.0 | 0.04 | 14.15 | 0.00 | 2.155 | 4.34 | 1.46 | 3.2 | 96.8 | 0.0 | 0.70 | 1.02 | 0.80 | 0.80 | 3.07 | 8160 | 1093 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7U7N | 26382 | 2023-02-18 | 2022-03-07 | 3.47 | 2.42 | 3.51 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.01 | 2.164 | 8.81 | 0.89 | 2.6 | 97.4 | 0.0 | 1.04 | 0.74 | 0.76 | 2.33 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 17.35 | 0.00 | 2.126 | 10.06 | 0.25 | 3.0 | 97.0 | 0.0 | 1.09 | 0.32 | 0.74 | 0.77 | 2.35 | 7284 | 884 | 10 | 0 | 16 | 0 | 0 | logfile |
✔ | 7N1V | 24124 | 2023-02-26 | 2021-05-28 | 3.21 | 2.67 | — | 2.0 | 0.013 | 1.76 | 10.0 | 0.13 | 13.79 | 0.01 | 1.776 | 4.31 | 0.98 | 6.5 | 93.2 | 0.3 | -1.63 | 0.82 | 0.80 | 3.43 | 2.1 | 0.007 | 0.79 | 0.0 | 0.05 | 15.87 | 0.00 | 2.088 | 11.82 | 0.87 | 5.5 | 94.5 | 0.0 | -0.42 | 1.32 | 0.84 | 0.83 | 2.73 | 26947 | 3274 | 35 | 0 | 95 | 0 | 0 | logfile |
✔ | 7QKY | 14057 | 2023-02-17 | 2021-12-19 | 1.86 | 2.10 | 1.91 | 2.0 | 0.011 | 1.75 | 3.0 | 0.09 | 12.76 | 0.01 | 2.522 | 1.04 | 0.61 | 4.7 | 95.3 | 0.0 | -3.08 | 0.33 | 0.75 | 8.32 | 2.0 | 0.004 | 0.74 | 0.0 | 0.05 | 16.56 | 0.00 | 2.028 | 5.37 | 0.61 | 6.2 | 93.8 | 0.0 | -3.22 | 1.00 | 0.39 | 0.84 | 7.47 | 5760 | 396 | 6 | 0 | 0 | 0 | 2862 | logfile |
✔ | 7UWJ | 26833 | 2023-02-17 | 2022-05-03 | 3.2 | 2.38 | 3.23 | 2.0 | 0.004 | 0.78 | 1.0 | 0.05 | 12.97 | 0.01 | 2.189 | 11.24 | 0.00 | 4.1 | 95.9 | 0.0 | -2.14 | 0.66 | 0.61 | 2.04 | 2.0 | 0.003 | 0.63 | 0.0 | 0.04 | 14.92 | 0.00 | 2.228 | 10.10 | 0.33 | 4.7 | 95.3 | 0.0 | -1.88 | 0.44 | 0.67 | 0.64 | 1.81 | 5314 | 664 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7QKL | 14046 | 2023-02-17 | 2021-12-17 | 2.07 | 2.04 | 1.98 | 2.0 | 0.011 | 2.37 | 0.0 | 0.25 | 12.79 | 0.01 | 2.537 | 0.14 | 0.00 | 3.6 | 96.4 | 0.0 | -1.75 | 0.40 | 0.83 | 7.75 | 2.0 | 0.003 | 0.62 | 0.0 | 0.05 | 17.01 | 0.00 | 2.552 | 3.25 | 0.25 | 2.7 | 97.3 | 0.0 | -1.29 | 2.03 | 0.44 | 0.91 | 7.62 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XT4 | 33439 | 2023-02-22 | 2022-05-16 | 3.08 | 2.22 | 2.99 | 2.0 | 0.006 | 0.91 | 1.0 | 0.06 | 17.94 | 0.01 | 2.244 | 4.64 | 3.70 | 5.0 | 94.8 | 0.2 | -2.53 | 0.80 | 0.80 | 3.42 | 2.0 | 0.004 | 0.62 | 0.0 | 0.04 | 18.32 | 0.00 | 2.219 | 8.16 | 0.47 | 4.7 | 95.3 | 0.1 | 0.35 | 1.44 | 0.81 | 0.82 | 3.13 | 16850 | 1939 | 5 | 55 | 4 | 0 | 0 | logfile |
✘ | 7V69 | 31739 | 2023-02-19 | 2021-08-20 | 3.4 | 2.24 | — | 2.0 | 0.003 | 0.65 | 0.0 | 0.04 | 12.64 | 0.00 | 2.096 | 13.22 | 0.00 | 2.9 | 97.1 | 0.0 | -2.02 | 0.68 | 0.64 | 2.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8539 | 1122 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZU | 24778 | 2023-02-16 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.002 | 0.48 | 0.0 | 0.03 | 15.88 | 0.00 | 2.308 | 6.69 | 1.40 | 0.0 | 100.0 | 0.0 | 5.49 | 0.47 | 0.80 | 0.81 | 1.54 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SCH | 25035 | 2023-02-19 | 2021-09-28 | 3.1 | 2.24 | 3.07 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 11.92 | 0.00 | 2.218 | 9.09 | 0.19 | 4.1 | 95.9 | 0.0 | 0.02 | 0.78 | 0.75 | 3.40 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 15.35 | 0.00 | 2.084 | 10.65 | 0.56 | 4.7 | 95.3 | 0.0 | 0.28 | 0.40 | 0.78 | 0.80 | 2.98 | 9711 | 1190 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 6UVN | 20908 | 2023-02-27 | 2019-11-03 | 3.1 | 2.62 | — | 2.0 | 0.010 | 0.84 | 1.0 | 0.05 | 14.35 | 0.00 | 2.114 | 19.06 | 0.52 | 8.1 | 91.8 | 0.1 | -3.87 | 0.89 | 0.81 | 2.57 | 2.0 | 0.005 | 0.66 | 0.0 | 0.04 | 15.79 | 0.00 | 1.746 | 14.24 | 0.23 | 6.6 | 93.4 | 0.0 | -1.26 | 0.48 | 0.90 | 0.82 | 2.32 | 29487 | 3461 | 14 | 61 | 83 | 0 | 0 | logfile |
✔ | 6Xi8 | 22191 | 2023-02-17 | 2020-06-19 | 3.64 | 2.63 | 3.78 | 2.0 | 0.010 | 1.69 | 4.0 | 0.11 | 15.20 | 0.01 | 1.333 | 6.49 | 0.77 | 9.0 | 91.0 | 0.0 | -4.62 | 0.66 | 0.54 | 0.71 | 1.9 | 0.004 | 0.90 | 0.0 | 0.05 | 17.20 | 0.01 | 2.175 | 17.74 | 0.97 | 9.0 | 91.0 | 0.0 | -2.43 | 1.23 | 0.69 | 0.64 | 0.82 | 5022 | 636 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7JVR | 22511 | 2023-02-18 | 2020-08-22 | 2.8 | 2.21 | — | 2.0 | 0.012 | 0.93 | 0.0 | 0.05 | 8.66 | 0.01 | 2.235 | 4.70 | 0.00 | 2.8 | 97.2 | 0.0 | -0.85 | 0.74 | 0.74 | 2.70 | 2.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.58 | 0.00 | 2.052 | 14.20 | 2.88 | 2.5 | 97.5 | 0.0 | 0.57 | 0.66 | 0.75 | 0.77 | 2.68 | 8872 | 1126 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KUE | 23036 | 2023-02-17 | 2020-11-24 | 3.5 | 2.53 | 3.43 | 2.0 | 0.010 | 1.62 | 3.0 | 0.11 | 15.46 | 0.01 | 2.205 | 5.62 | 0.78 | 8.4 | 91.6 | 0.0 | -4.55 | 0.71 | 0.69 | 2.12 | 2.1 | 0.003 | 0.76 | 0.0 | 0.05 | 17.07 | 0.01 | 2.229 | 12.94 | 0.97 | 8.0 | 92.0 | 0.0 | -2.24 | 1.31 | 0.72 | 0.71 | 1.71 | 4726 | 577 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7VUG | 32127 | 2023-02-19 | 2021-11-02 | 3.2 | 2.20 | — | 2.0 | 0.004 | 0.61 | 0.0 | 0.04 | 13.57 | 0.00 | 2.099 | 11.88 | 0.00 | 6.3 | 93.7 | 0.0 | -0.75 | 0.73 | 0.72 | 2.48 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 15.83 | 0.00 | 1.991 | 12.95 | 0.20 | 5.5 | 94.5 | 0.0 | -0.68 | 0.34 | 0.73 | 0.74 | 2.08 | 8924 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7SCJ | 25036 | 2023-02-19 | 2021-09-28 | 3.4 | 2.31 | 2.97 | 2.0 | 0.004 | 0.58 | 0.0 | 0.05 | 11.19 | 0.01 | 2.200 | 9.22 | 0.00 | 5.7 | 94.3 | 0.0 | -0.25 | 0.75 | 0.72 | 3.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9336 | 1131 | 6 | 2 | 7 | 0 | 0 | logfile |
✔ | 7L1Q | 23115 | 2023-02-24 | 2020-12-15 | 3.4 | 2.29 | — | 2.0 | 0.008 | 1.29 | 6.0 | 0.07 | 14.92 | 0.01 | 1.807 | 2.68 | 2.54 | 3.7 | 96.1 | 0.2 | -0.80 | 0.72 | 0.67 | 1.56 | 1.7 | 0.003 | 0.80 | 0.0 | 0.05 | 17.82 | 0.01 | 1.889 | 15.87 | 0.82 | 3.4 | 96.5 | 0.0 | -0.23 | 1.90 | 0.73 | 0.73 | 1.36 | 24204 | 3118 | 13 | 0 | 13 | 0 | 0 | logfile |
✔ | 7N1W | 24125 | 2023-02-25 | 2021-05-28 | 3.33 | 2.63 | — | 2.0 | 0.013 | 1.77 | 17.0 | 0.12 | 13.88 | 0.01 | 1.951 | 6.11 | 0.81 | 6.0 | 93.5 | 0.5 | -1.65 | 0.82 | 0.79 | 3.10 | 1.9 | 0.004 | 0.73 | 0.0 | 0.05 | 15.89 | 0.00 | 2.008 | 11.72 | 0.49 | 4.9 | 95.1 | 0.0 | -0.15 | 1.57 | 0.84 | 0.82 | 2.35 | 26810 | 3257 | 35 | 0 | 95 | 0 | 0 | logfile |
✔ | 7EQ1 | 31254 | 2023-02-18 | 2021-04-28 | 3.3 | 2.26 | — | 2.0 | 0.003 | 0.58 | 0.0 | 0.04 | 13.83 | 0.00 | 2.113 | 10.24 | 0.00 | 6.5 | 93.5 | 0.0 | -0.59 | 0.75 | 0.74 | 3.06 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 15.98 | 0.00 | 2.091 | 10.91 | 0.41 | 6.0 | 94.0 | 0.0 | -0.11 | 0.31 | 0.75 | 0.77 | 2.68 | 8999 | 1150 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WY0 | 32883 | 2023-02-18 | 2022-02-15 | 2.83 | 2.21 | — | 2.0 | 0.007 | 0.87 | 0.0 | 0.06 | 11.98 | 0.00 | 1.690 | 7.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.00 | 0.74 | 0.73 | 3.63 | 2.0 | 0.004 | 0.68 | 0.0 | 0.04 | 15.36 | 0.00 | 2.124 | 12.48 | 1.97 | 5.3 | 94.7 | 0.0 | 0.15 | 0.47 | 0.75 | 0.75 | 2.68 | 8723 | 1112 | 5 | 0 | 0 | 0 | 0 | logfile |