The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7T9i | 25758 | 2023-11-18 | 2021-12-19 | 2.9 | 2.43 | — | 1.9 | 0.005 | 0.91 | 1.0 | 0.05 | 12.76 | 0.01 | 2.016 | 3.30 | 0.62 | 3.6 | 96.4 | 0.0 | -0.16 | 0.69 | 0.63 | 2.32 | 1.8 | 0.004 | 0.67 | 0.0 | 0.04 | 15.11 | 0.00 | 1.904 | 9.43 | 2.50 | 6.3 | 93.7 | 0.0 | -0.52 | 1.14 | 0.74 | 0.72 | 2.51 | 23529 | 1532 | 11 | 0 | 8 | 0 | 11557 | logfile |
✔ | 8BK9 | 16093 | 2023-11-21 | 2022-11-08 | 2.1 | 1.91 | 2.07 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 17.00 | 0.00 | 2.222 | 1.87 | 0.49 | 1.2 | 98.8 | 0.0 | 4.72 | 0.69 | 0.87 | 6.31 | 1.9 | 0.005 | 0.68 | 0.0 | 0.04 | 17.12 | 0.00 | 2.246 | 2.77 | 0.38 | 1.8 | 98.2 | 0.0 | 4.48 | 0.18 | 0.69 | 0.88 | 6.63 | 34978 | 4128 | 54 | 0 | 6 | 1156 | 0 | logfile |
✔ | 8E9Y | 27968 | 2023-11-14 | 2022-08-27 | 2.79 | 2.12 | 2.79 | 1.9 | 0.005 | 0.81 | 0.0 | 0.05 | 13.49 | 0.00 | 2.217 | 12.62 | 0.12 | 5.2 | 94.8 | 0.0 | -1.06 | 0.76 | 0.75 | 3.19 | 1.9 | 0.004 | 0.63 | 0.0 | 0.04 | 15.81 | 0.00 | 2.202 | 11.11 | 1.62 | 5.2 | 94.8 | 0.1 | -0.38 | 0.37 | 0.76 | 0.76 | 2.55 | 8479 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8E9Z | 27969 | 2023-11-14 | 2022-08-27 | 2.69 | 2.09 | 2.64 | 1.9 | 0.004 | 0.80 | 2.0 | 0.05 | 15.12 | 0.01 | 2.248 | 9.60 | 0.34 | 3.2 | 96.8 | 0.0 | -1.79 | 0.79 | 0.79 | 2.55 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 16.07 | 0.00 | 1.969 | 7.33 | 1.49 | 3.2 | 96.8 | 0.0 | 0.95 | 0.35 | 0.79 | 0.80 | 3.01 | 8566 | 1129 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7o6Q | 12740 | 2023-11-14 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.51 | 0.00 | 2.189 | 4.70 | 1.63 | 0.8 | 99.2 | 0.0 | 3.42 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 6ZGL | 11210 | 2023-11-16 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.114 | 4.28 | 0.93 | 0.9 | 99.1 | 0.0 | 3.77 | 0.76 | 0.75 | 0.83 | 7.09 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 8AG5 | 15416 | 2023-11-16 | 2022-07-19 | 3.47 | 2.11 | — | 1.9 | 0.003 | 0.49 | 0.0 | 0.04 | 17.82 | 0.00 | 2.194 | 6.46 | 0.26 | 3.8 | 96.2 | 0.0 | 0.35 | 0.75 | 0.75 | 3.20 | 1.9 | 0.002 | 0.51 | 0.0 | 0.04 | 17.77 | 0.00 | 2.178 | 6.94 | 0.45 | 3.7 | 96.3 | 0.0 | 0.53 | 0.87 | 0.76 | 0.78 | 2.90 | 13762 | 1703 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P5U | 17453 | 2023-11-13 | 2023-05-24 | 2.17 | 2.20 | 2.21 | 1.9 | 0.032 | 1.60 | 0.0 | 0.08 | 15.06 | 0.01 | 1.601 | 3.66 | 0.31 | 3.0 | 97.0 | 0.0 | -1.97 | 0.91 | 0.92 | 5.23 | 1.9 | 0.004 | 0.58 | 0.0 | 0.04 | 17.05 | 0.00 | 1.953 | 4.75 | 0.78 | 2.4 | 97.6 | 0.0 | 0.91 | 0.40 | 0.89 | 0.89 | 4.37 | 52878 | 6714 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 8F0K | 28759 | 2023-11-15 | 2022-11-03 | 1.9 | 1.70 | 1.92 | 1.9 | 0.010 | 0.59 | 0.0 | 0.04 | 14.21 | 0.01 | 2.252 | 4.34 | 0.91 | 1.2 | 98.8 | 0.0 | -1.70 | 0.50 | 0.67 | 4.75 | 1.9 | 0.004 | 0.68 | 0.0 | 0.04 | 16.58 | 0.00 | 2.187 | 6.72 | 1.09 | 2.1 | 97.9 | 0.0 | 1.33 | 0.64 | 0.58 | 0.73 | 4.97 | 10553 | 1272 | 12 | 0 | 18 | 39 | 0 | logfile |
✔ | 7UA1 | 26412 | 2023-11-20 | 2022-03-11 | 2.99 | 3.02 | — | 1.9 | 0.003 | 0.62 | 0.0 | 0.04 | 14.11 | 0.00 | 1.785 | 8.77 | 0.29 | 3.3 | 96.6 | 0.1 | 1.20 | 0.85 | 0.80 | 2.97 | 1.9 | 0.003 | 0.67 | 0.0 | 0.04 | 15.27 | 0.00 | 2.125 | 9.07 | 0.44 | 4.0 | 96.0 | 0.1 | 1.12 | 0.44 | 0.87 | 0.84 | 3.34 | 138680 | 17324 | 12 | 0 | 16 | 0 | 0 | logfile |
✔ | 8P5X | 17456 | 2023-11-14 | 2023-05-24 | 2.29 | 2.20 | 2.36 | 1.9 | 0.013 | 1.76 | 0.0 | 0.09 | 14.15 | 0.00 | 2.250 | 0.66 | 0.21 | 3.1 | 96.9 | 0.0 | -1.93 | 0.89 | 0.90 | 4.98 | 2.0 | 0.003 | 0.54 | 0.0 | 0.04 | 16.33 | 0.00 | 2.003 | 2.59 | 0.51 | 2.1 | 97.9 | 0.0 | 0.77 | 0.42 | 0.87 | 0.88 | 4.28 | 55346 | 7110 | 18 | 0 | 12 | 0 | 0 | logfile |
✔ | 7VZ4 | 32220 | 2023-11-15 | 2021-11-15 | 1.89 | 1.72 | — | 1.9 | 0.010 | 1.17 | 0.0 | 0.08 | 29.00 | 0.00 | 2.167 | 2.63 | 0.97 | 1.6 | 98.4 | 0.0 | 0.11 | 0.75 | 0.82 | 7.08 | 1.9 | 0.005 | 0.70 | 0.0 | 0.04 | 28.42 | 0.01 | 2.320 | 4.08 | 0.49 | 0.5 | 99.5 | 0.0 | 2.76 | 0.80 | 0.78 | 0.86 | 7.64 | 11843 | 746 | 10 | 290 | 0 | 0 | 0 | logfile |
✘ | 8BQV | 16188 | 2023-11-14 | 2023-01-18 | 2.0 | 1.96 | 1.89 | 1.9 | 0.008 | 1.01 | 0.0 | 0.07 | 8.75 | 0.00 | 0.000 | 15.01 | 0.00 | 6.8 | 93.2 | 0.0 | -2.59 | 0.54 | 0.77 | 8.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8595 | 1155 | 45 | 0 | 105 | 120 | 0 | logfile |
✔ | 8F2B | 28812 | 2023-11-15 | 2022-11-07 | 2.0 | 1.79 | 2.02 | 1.9 | 0.011 | 0.55 | 0.0 | 0.04 | 14.19 | 0.00 | 2.278 | 5.13 | 1.32 | 1.0 | 99.0 | 0.0 | -2.02 | 0.54 | 0.74 | 4.60 | 1.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.98 | 0.00 | 2.198 | 6.30 | 1.42 | 2.5 | 97.5 | 0.0 | 1.21 | 0.95 | 0.55 | 0.75 | 5.05 | 10360 | 1273 | 12 | 0 | 16 | 31 | 0 | logfile |
✔ | 8P6Y | 17511 | 2023-11-13 | 2023-05-30 | 1.9 | 1.73 | 1.95 | 1.9 | 0.005 | 0.60 | 0.0 | 0.04 | 16.82 | 0.00 | 2.148 | 3.62 | 0.36 | 1.0 | 98.9 | 0.2 | 1.99 | 0.68 | 0.84 | 6.33 | 1.9 | 0.004 | 0.63 | 0.0 | 0.04 | 16.85 | 0.00 | 2.148 | 4.60 | 0.90 | 1.3 | 98.5 | 0.2 | 1.74 | 0.21 | 0.68 | 0.85 | 6.33 | 5266 | 630 | 7 | 0 | 3 | 158 | 0 | logfile |
✔ | 8P6V | 17508 | 2023-11-13 | 2023-05-30 | 1.9 | 1.76 | 1.97 | 1.9 | 0.005 | 0.62 | 0.0 | 0.04 | 16.21 | 0.00 | 2.221 | 5.67 | 1.26 | 1.8 | 98.1 | 0.2 | 1.53 | 0.64 | 0.77 | 5.52 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 16.68 | 0.00 | 2.124 | 5.67 | 2.17 | 1.6 | 98.2 | 0.2 | 1.30 | 0.75 | 0.64 | 0.78 | 5.35 | 5243 | 630 | 7 | 0 | 2 | 138 | 0 | logfile |
✔ | 8DZP | 27804 | 2023-11-14 | 2022-08-08 | 2.71 | 2.09 | 2.70 | 1.9 | 0.019 | 0.72 | 0.0 | 0.10 | 13.90 | 0.01 | 2.216 | 5.26 | 0.11 | 3.6 | 96.4 | 0.0 | -0.46 | 0.78 | 0.78 | 3.63 | 1.8 | 0.005 | 0.67 | 0.0 | 0.05 | 15.74 | 0.00 | 2.112 | 8.53 | 1.39 | 4.6 | 95.4 | 0.0 | 0.40 | 0.33 | 0.80 | 0.82 | 3.75 | 8657 | 1120 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UM5 | 26597 | 2023-11-14 | 2022-04-06 | 2.73 | 2.12 | 2.75 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 11.84 | 0.00 | 2.281 | 2.29 | 0.00 | 3.8 | 96.2 | 0.0 | -0.74 | 0.82 | 0.82 | 4.55 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 14.14 | 0.00 | 2.252 | 3.96 | 1.06 | 4.1 | 95.9 | 0.0 | 0.30 | 0.34 | 0.83 | 0.83 | 3.86 | 8277 | 1104 | 6 | 0 | 1 | 1 | 0 | logfile |
✔ | 7VUH | 32128 | 2023-11-14 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 13.59 | 0.00 | 2.099 | 13.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.4 | 0.005 | 0.70 | 0.0 | 0.04 | 15.83 | 0.00 | 2.031 | 14.94 | 0.11 | 6.0 | 94.0 | 0.0 | -1.28 | 0.38 | 0.72 | 0.73 | 2.42 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8oRM | 17129 | 2023-11-13 | 2023-04-14 | 1.9 | 1.83 | 1.88 | 1.9 | 0.004 | 0.58 | 0.0 | 0.04 | 16.77 | 0.00 | 2.236 | 3.99 | 0.90 | 1.6 | 98.2 | 0.2 | 1.88 | 0.70 | 0.81 | 5.96 | 1.9 | 0.005 | 0.69 | 0.0 | 0.05 | 16.78 | 0.01 | 2.187 | 6.14 | 1.08 | 1.5 | 98.4 | 0.2 | 1.36 | 0.18 | 0.70 | 0.83 | 5.92 | 5341 | 632 | 7 | 0 | 2 | 210 | 0 | logfile |