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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 3JAU | 6366 | 2022-07-04 | 2015-06-24 | 4.8 | 4.76 | — | 5.7 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 11.51 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A63 | 3061 | 2022-07-03 | 2015-06-24 | 3.4 | 3.50 | 3.42 | 3.5 | 0.010 | 1.68 | 8.0 | 0.11 | 19.25 | 0.01 | 2.079 | 39.51 | 13.74 | 6.4 | 91.5 | 2.1 | -0.17 | 0.36 | 0.40 | 2.09 | 3.5 | 0.004 | 0.73 | 0.0 | 0.04 | 17.94 | 0.00 | 2.201 | 12.69 | 0.57 | 5.9 | 93.8 | 0.3 | -0.05 | 3.23 | 0.63 | 0.83 | 2.03 | 10003 | 1223 | 7 | 0 | 22 | 0 | 0 | logfile |
✔ | 5A6F | 3063 | 2022-07-03 | 2015-06-25 | 4.2 | 5.75 | — | 5.0 | 0.012 | 1.50 | 0.0 | 0.05 | 12.32 | 0.01 | 2.112 | 10.08 | 3.74 | 12.2 | 87.6 | 0.2 | -4.94 | 0.56 | 0.74 | — | 4.7 | 0.002 | 0.57 | 0.0 | 0.04 | 10.94 | 0.00 | 2.010 | 10.19 | 0.00 | 5.1 | 94.9 | 0.0 | -1.00 | 0.99 | 0.57 | 0.75 | — | 8881 | 540 | 2 | 0 | 43 | 0 | 4330 | logfile |
✔ | 5A6E | 3062 | 2022-07-03 | 2015-06-25 | 4.5 | 6.76 | — | 5.1 | 0.010 | 3.73 | 0.0 | 0.05 | 15.55 | 0.01 | 2.112 | 8.77 | 3.19 | 11.1 | 88.8 | 0.2 | -5.00 | 0.36 | 0.56 | — | 4.8 | 0.003 | 0.58 | 0.0 | 0.03 | 10.50 | 0.00 | 1.994 | 10.27 | 0.00 | 6.4 | 93.6 | 0.0 | -0.83 | 1.50 | 0.40 | 0.73 | — | 11093 | 634 | 4 | 0 | 182 | 0 | 5102 | logfile |
✘ | 5A7U | 3079 | 2022-07-02 | 2015-07-10 | 4.8 | 3.82 | — | 4.6 | 0.020 | 3.41 | 3.0 | 0.25 | 21.78 | 0.08 | 2.651 | 30.77 | 25.00 | 24.0 | 72.0 | 4.0 | -6.05 | -0.01 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 455 | 27 | 1 | 0 | 1 | 0 | 231 | logfile |
✔ | 5A8L | 3099 | 2022-07-03 | 2015-07-16 | 3.8 | 3.60 | — | 3.5 | 0.004 | 0.67 | 0.0 | 0.02 | 12.36 | 0.00 | 1.435 | 9.01 | 0.95 | 10.3 | 86.8 | 2.9 | -2.06 | 0.18 | 0.43 | 0.47 | 3.5 | 0.007 | 0.91 | 0.0 | 0.03 | 16.17 | 0.01 | 1.948 | 15.58 | 0.38 | 8.5 | 90.6 | 1.0 | -1.53 | 1.40 | 0.22 | 0.61 | 0.47 | 12264 | 624 | 9 | 347 | 0 | 0 | 0 | logfile |
✔ | 5A9Z | 6396 | 2022-07-10 | 2015-07-23 | 4.7 | 4.83 | — | 4.7 | 0.013 | 1.89 | 26.0 | 0.14 | 23.31 | 0.03 | 0.000 | 199.55 | 29.15 | 25.1 | 49.6 | 25.2 | -7.73 | 0.81 | 0.65 | — | 4.7 | 0.006 | 1.00 | 0.0 | 0.05 | 19.23 | 0.01 | 0.000 | 40.34 | 0.22 | 21.3 | 76.3 | 2.3 | -4.29 | 2.90 | 0.87 | 0.81 | — | 150547 | 6671 | 58 | 4527 | 131 | 0 | 0 | logfile |
✔ | 3JB6 | 6408 | 2022-07-04 | 2015-08-02 | 3.3 | 3.35 | — | 3.4 | 0.010 | 0.90 | 4.0 | 0.06 | 9.55 | 0.01 | 2.123 | 8.54 | 0.20 | 2.4 | 97.4 | 0.1 | -3.72 | 0.63 | 0.90 | 5.02 | 3.4 | 0.002 | 0.58 | 0.0 | 0.04 | 15.06 | 0.00 | 2.157 | 5.94 | 0.20 | 1.8 | 98.2 | 0.0 | 0.16 | 1.19 | 0.63 | 0.88 | 3.71 | 13904 | 1731 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 3JB7 | 6404 | 2022-07-04 | 2015-08-03 | 4.0 | 4.13 | — | 4.1 | 0.007 | 0.76 | 3.0 | 0.05 | 10.78 | 0.00 | 0.793 | 10.69 | 1.13 | 3.9 | 95.9 | 0.2 | -2.17 | 0.76 | 0.85 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 15.37 | 0.00 | 2.188 | 10.87 | 0.66 | 2.6 | 97.3 | 0.1 | 0.19 | 0.89 | 0.78 | 0.85 | — | 14176 | 1733 | 8 | 11 | 3 | 0 | 0 | logfile |
✔ | 3JB9 | 6413 | 2022-07-05 | 2015-08-09 | 3.6 | 3.70 | — | 3.6 | 0.010 | 1.29 | 13.0 | 0.07 | 16.84 | 0.01 | 1.253 | 18.11 | 8.06 | 9.1 | 87.9 | 3.0 | -3.97 | 0.52 | 0.51 | 1.26 | 3.6 | 0.007 | 0.90 | 2.0 | 0.04 | 17.16 | 0.01 | 1.525 | 16.23 | 0.17 | 6.3 | 93.0 | 0.8 | -1.24 | 0.93 | 0.56 | 0.64 | 1.07 | 86551 | 9194 | 50 | 328 | 1328 | 0 | 0 | logfile |
✔ | 5ACo | 3121 | 2022-07-05 | 2015-08-17 | 4.36 | 4.52 | — | 4.3 | 0.012 | 1.91 | 3.0 | 0.11 | 10.21 | 0.02 | 1.986 | 10.87 | 0.29 | 9.1 | 88.9 | 1.9 | -2.40 | 0.70 | 0.68 | — | 4.3 | 0.007 | 0.84 | 0.0 | 0.05 | 11.50 | 0.00 | 2.113 | 15.74 | 0.05 | 8.4 | 91.1 | 0.6 | -1.32 | 1.61 | 0.82 | 0.85 | — | 21297 | 2415 | 18 | 0 | 192 | 0 | 0 | logfile |
✔ | 5ADX | 2856 | 2022-07-08 | 2015-08-24 | 4.0 | 4.18 | — | 4.0 | 0.008 | 1.05 | 1.0 | 0.06 | 12.82 | 0.00 | 1.155 | 3.45 | 1.97 | 6.3 | 93.5 | 0.3 | -2.81 | 0.77 | 0.63 | — | 4.0 | 0.004 | 0.70 | 0.0 | 0.04 | 14.93 | 0.00 | 2.095 | 11.54 | 0.29 | 5.3 | 94.6 | 0.0 | -0.47 | 0.91 | 0.86 | 0.79 | — | 49392 | 4737 | 27 | 0 | 2569 | 0 | 0 | logfile |
✔ | 5ADY | 3133 | 2022-07-06 | 2015-08-25 | 4.5 | 4.75 | — | 4.5 | 0.011 | 1.28 | 0.0 | 0.06 | 18.75 | 0.01 | 1.391 | 57.97 | 0.21 | 11.7 | 81.7 | 6.7 | -3.35 | 0.72 | 0.63 | — | 4.5 | 0.005 | 0.76 | 0.0 | 0.04 | 17.54 | 0.01 | 1.836 | 30.04 | 0.00 | 13.3 | 85.6 | 1.1 | -3.15 | 1.12 | 0.87 | 0.84 | — | 97364 | 4197 | 35 | 3020 | 2 | 0 | 0 | logfile |
✔ | 5ANB | 3146 | 2022-07-08 | 2015-09-06 | 4.1 | 4.11 | — | 4.1 | 0.008 | 1.31 | 6.0 | 0.10 | 18.54 | 0.01 | 1.245 | 5.13 | 4.33 | 13.0 | 83.9 | 3.1 | -4.17 | 0.41 | 0.75 | — | 4.1 | 0.007 | 0.93 | 0.0 | 0.04 | 17.15 | 0.01 | 1.065 | 22.25 | 0.00 | 13.2 | 86.1 | 0.8 | -3.51 | 0.83 | 0.39 | 0.71 | — | 48493 | 3025 | 12 | 1162 | 0 | 0 | 0 | logfile |
✔ | 5ANC | 3147 | 2022-07-07 | 2015-09-06 | 4.2 | 4.23 | — | 4.2 | 0.008 | 1.35 | 7.0 | 0.10 | 19.00 | 0.01 | 1.236 | 6.63 | 4.21 | 13.6 | 82.7 | 3.6 | -4.33 | 0.41 | 0.74 | — | 4.2 | 0.011 | 1.13 | 1.0 | 0.05 | 17.44 | 0.01 | 1.782 | 26.46 | 0.00 | 15.0 | 84.0 | 1.0 | -3.96 | 1.54 | 0.39 | 0.70 | — | 46807 | 2801 | 11 | 1162 | 0 | 0 | 0 | logfile |
✔ | 5AN9 | 3145 | 2022-07-07 | 2015-09-06 | 3.3 | 3.29 | — | 3.3 | 0.007 | 1.22 | 5.0 | 0.10 | 17.04 | 0.01 | 1.192 | 3.57 | 2.32 | 9.1 | 88.0 | 2.9 | -3.68 | 0.38 | 0.81 | 1.98 | 3.3 | 0.006 | 0.81 | 0.0 | 0.04 | 17.16 | 0.01 | 1.867 | 12.72 | 0.06 | 8.9 | 90.7 | 0.5 | -2.36 | 0.69 | 0.39 | 0.77 | 1.56 | 39693 | 1905 | 11 | 1162 | 0 | 0 | 0 | logfile |
✔ | 3JBR | 6475 | 2022-07-04 | 2015-09-29 | 4.2 | 4.39 | — | 4.2 | 0.008 | 1.30 | 0.0 | 0.06 | 8.64 | 0.00 | 1.419 | 19.29 | 0.37 | 8.1 | 84.8 | 7.0 | -3.43 | 0.66 | 0.70 | — | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 11.15 | 0.00 | 2.086 | 14.97 | 0.09 | 11.5 | 86.4 | 2.1 | -0.82 | 1.54 | 0.66 | 0.70 | — | 16467 | 2148 | 6 | 0 | 385 | 0 | 0 | logfile |
✔ | 5FJ9 | 3179 | 2022-07-07 | 2015-10-06 | 4.6 | 4.67 | — | 4.6 | 0.004 | 1.21 | 0.0 | 0.05 | 12.45 | 0.00 | 1.842 | 13.11 | 4.04 | 16.0 | 82.8 | 1.1 | -4.61 | 0.80 | 0.72 | — | 4.6 | 0.004 | 0.90 | 0.0 | 0.05 | 13.51 | 0.01 | 1.849 | 18.37 | 0.00 | 13.0 | 85.9 | 1.1 | -2.32 | 2.54 | 0.83 | 0.78 | — | 38680 | 4845 | 22 | 0 | 41 | 0 | 0 | logfile |
✔ | 5FJ8 | 3178 | 2022-07-07 | 2015-10-06 | 3.9 | 3.97 | — | 4.0 | 0.004 | 1.21 | 0.0 | 0.04 | 13.54 | 0.00 | 2.035 | 13.99 | 4.05 | 16.0 | 82.9 | 1.1 | -4.73 | 0.70 | 0.69 | 0.95 | 3.9 | 0.009 | 1.08 | 0.0 | 0.05 | 17.05 | 0.01 | 1.996 | 17.26 | 0.33 | 13.1 | 85.7 | 1.2 | -2.68 | 1.47 | 0.76 | 0.77 | 0.99 | 39284 | 4804 | 25 | 47 | 41 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2022-07-02 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 18.27 | 0.00 | 2.222 | 7.93 | 3.29 | 1.7 | 98.3 | 0.0 | 0.83 | 1.30 | 0.22 | 0.81 | 3.95 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |