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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6RES | 4855 | 2022-12-11 | 2019-04-12 | 4.3 | 4.30 | — | 4.2 | 0.006 | 0.95 | 0.0 | 0.06 | 15.02 | 0.01 | 1.680 | 8.29 | 0.41 | 6.0 | 93.9 | 0.1 | -5.14 | 0.64 | 0.77 | — | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 14.38 | 0.00 | 1.896 | 15.39 | 0.00 | 5.3 | 94.6 | 0.1 | -0.94 | 1.27 | 0.64 | 0.77 | — | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6RE9 | 4846 | 2022-12-11 | 2019-04-12 | 3.9 | 3.98 | 3.94 | 3.9 | 0.006 | 0.86 | 0.0 | 0.05 | 14.58 | 0.01 | 1.985 | 5.82 | 0.21 | 4.3 | 95.5 | 0.2 | -4.12 | 0.61 | 0.74 | 1.21 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 16.65 | 0.00 | 1.911 | 14.89 | 0.60 | 4.4 | 95.5 | 0.1 | -0.35 | 2.26 | 0.64 | 0.80 | 1.05 | 53720 | 7099 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6LN6 | 0925 | 2022-12-11 | 2019-12-28 | 2.9 | 3.03 | 2.87 | 3.0 | 0.005 | 0.64 | 0.0 | 0.04 | 11.98 | 0.00 | 2.035 | 6.60 | 0.00 | 2.0 | 98.0 | 0.0 | -3.94 | 0.65 | 0.82 | 3.55 | 3.0 | 0.005 | 0.62 | 0.0 | 0.05 | 15.68 | 0.00 | 2.030 | 7.36 | 1.62 | 2.2 | 97.8 | 0.0 | 0.18 | 1.33 | 0.66 | 0.84 | 3.42 | 7836 | 1010 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6F1V | 4170 | 2022-12-11 | 2017-11-23 | 3.4 | 4.10 | — | 3.7 | 0.014 | 1.86 | 0.0 | 0.09 | 11.72 | 0.01 | 2.246 | 13.29 | 0.18 | 11.1 | 88.7 | 0.2 | -3.46 | 0.46 | 0.69 | 0.05 | 3.7 | 0.003 | 0.71 | 0.0 | 0.04 | 15.64 | 0.00 | 2.200 | 14.64 | 0.18 | 5.9 | 94.1 | 0.0 | 1.12 | 1.71 | 0.48 | 0.75 | 0.47 | 5164 | 628 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RDT | 4830 | 2022-12-11 | 2019-04-12 | 3.4 | 3.29 | — | 3.4 | 0.011 | 1.02 | 1.0 | 0.06 | 15.14 | 0.01 | 2.058 | 6.14 | 0.60 | 5.7 | 94.0 | 0.3 | -4.05 | 0.68 | 0.83 | 2.56 | 3.4 | 0.002 | 0.59 | 0.0 | 0.04 | 16.24 | 0.00 | 1.975 | 9.86 | 0.20 | 4.1 | 95.8 | 0.1 | 0.25 | 2.40 | 0.69 | 0.85 | 1.91 | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6RDQ | 4827 | 2022-12-11 | 2019-04-12 | 4.0 | 3.99 | — | 3.9 | 0.007 | 0.94 | 0.0 | 0.05 | 14.97 | 0.01 | 1.908 | 7.03 | 0.44 | 5.2 | 94.6 | 0.2 | -4.22 | 0.72 | 0.79 | — | 3.9 | 0.004 | 0.70 | 0.0 | 0.04 | 16.62 | 0.00 | 1.865 | 14.20 | 0.48 | 5.6 | 94.3 | 0.1 | -0.53 | 0.63 | 0.72 | 0.81 | — | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6RDK | 4821 | 2022-12-11 | 2019-04-12 | 3.7 | 3.64 | — | 3.7 | 0.006 | 0.91 | 0.0 | 0.06 | 14.09 | 0.01 | 2.103 | 6.44 | 0.44 | 4.9 | 94.9 | 0.2 | -4.35 | 0.70 | 0.82 | 2.01 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 16.02 | 0.00 | 2.005 | 11.65 | 0.44 | 4.2 | 95.7 | 0.1 | -0.22 | 1.20 | 0.70 | 0.82 | 1.48 | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6F1Z | 4172 | 2022-12-11 | 2017-11-23 | 3.4 | 4.16 | — | 3.4 | 0.004 | 0.97 | 0.0 | 0.06 | 11.17 | 0.01 | 2.264 | 12.14 | 0.81 | 8.6 | 91.4 | 0.0 | -4.21 | 0.64 | 0.68 | -1.41 | 3.4 | 0.004 | 1.01 | 0.0 | 0.05 | 16.44 | 0.01 | 2.105 | 24.74 | 0.81 | 7.8 | 92.2 | 0.0 | -1.37 | 1.33 | 0.66 | 0.75 | -0.09 | 2138 | 265 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6REF | 4852 | 2022-12-11 | 2019-04-12 | 3.3 | 3.37 | 3.29 | 3.3 | 0.006 | 0.86 | 0.0 | 0.05 | 14.14 | 0.01 | 2.220 | 5.23 | 0.14 | 4.4 | 95.5 | 0.1 | -3.82 | 0.68 | 0.81 | 2.41 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.80 | 0.00 | 1.962 | 9.84 | 0.20 | 3.8 | 96.1 | 0.1 | 0.33 | 1.22 | 0.70 | 0.86 | 2.07 | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6FU8 | 4319 | 2022-12-11 | 2018-02-26 | 3.2 | 4.43 | 2.97 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.003 | 0.82 | 0.0 | 0.04 | 14.91 | 0.00 | 2.261 | 15.40 | 0.00 | 10.0 | 88.8 | 1.2 | -1.84 | 3.11 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 6RDL | 4822 | 2022-12-11 | 2019-04-12 | 3.7 | 3.82 | 3.81 | 3.8 | 0.006 | 0.91 | 0.0 | 0.06 | 14.09 | 0.01 | 2.103 | 6.44 | 0.44 | 4.9 | 94.9 | 0.2 | -4.35 | 0.65 | 0.77 | 1.54 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 16.08 | 0.00 | 1.954 | 12.67 | 0.41 | 4.4 | 95.5 | 0.1 | -0.29 | 1.27 | 0.66 | 0.80 | 1.12 | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 5MS1 | 3562 | 2022-12-11 | 2016-12-29 | 4.25 | 4.22 | — | 4.2 | 0.014 | 1.51 | 0.0 | 0.07 | 9.30 | 0.01 | 2.413 | 2.10 | 0.00 | 5.5 | 93.5 | 1.1 | -0.81 | 0.37 | 0.76 | — | 4.2 | 0.005 | 0.73 | 0.0 | 0.05 | 13.10 | 0.00 | 2.107 | 11.88 | 0.00 | 4.9 | 95.1 | 0.0 | -0.60 | 1.53 | 0.46 | 0.85 | — | 4350 | 556 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RE5 | 4842 | 2022-12-11 | 2019-04-12 | 3.2 | 3.28 | — | 3.3 | 0.010 | 0.94 | 0.0 | 0.06 | 14.48 | 0.01 | 2.163 | 5.78 | 0.27 | 4.8 | 95.0 | 0.2 | -3.94 | 0.72 | 0.85 | 2.85 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 15.80 | 0.00 | 1.956 | 9.37 | 0.27 | 3.3 | 96.6 | 0.1 | 0.37 | 0.47 | 0.71 | 0.86 | 2.15 | 53720 | 7099 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6SAG | 10130 | 2022-12-11 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 12.99 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 15.31 | 0.01 | 2.030 | 3.13 | 1.19 | 3.0 | 97.0 | 0.0 | 1.39 | 0.73 | 0.59 | 0.89 | 6.90 | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |
✔ | 6RDo | 4825 | 2022-12-11 | 2019-04-12 | 3.1 | 3.05 | — | 3.2 | 0.011 | 1.02 | 0.0 | 0.06 | 14.44 | 0.01 | 2.023 | 6.15 | 0.41 | 5.2 | 94.6 | 0.2 | -3.89 | 0.71 | 0.84 | 3.15 | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 15.84 | 0.00 | 1.882 | 9.54 | 0.23 | 4.4 | 95.4 | 0.2 | 0.20 | 1.16 | 0.72 | 0.86 | 2.57 | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6WUT | 21918 | 2022-12-11 | 2020-05-05 | 3.0 | 3.08 | — | 3.1 | 0.008 | 0.89 | 0.0 | 0.05 | 13.93 | 0.01 | 2.253 | 3.66 | 5.79 | 6.2 | 93.8 | 0.0 | -4.07 | 0.70 | 0.82 | 3.81 | 3.1 | 0.002 | 0.59 | 0.0 | 0.04 | 15.60 | 0.00 | 2.189 | 5.60 | 3.90 | 3.8 | 96.2 | 0.0 | 0.05 | 4.28 | 0.68 | 0.83 | 3.26 | 8218 | 1087 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GCS | 4384 | 2022-12-11 | 2018-04-19 | 4.32 | 4.51 | — | 4.3 | 0.010 | 1.35 | 3.0 | 0.97 | 12.10 | 0.01 | 2.231 | 10.19 | 0.73 | 13.4 | 85.9 | 0.8 | -4.79 | 0.77 | 0.78 | — | 4.3 | 0.009 | 1.72 | 0.0 | 0.30 | 12.75 | 0.01 | 2.061 | 23.81 | 0.00 | 14.0 | 85.7 | 0.3 | -2.36 | 0.79 | 0.78 | 0.80 | — | 55137 | 6864 | 53 | 0 | 667 | 0 | 0 | logfile |
✔ | 6HS7 | 0264 | 2022-12-11 | 2018-09-28 | 4.6 | 3.02 | 4.27 | 4.3 | 0.006 | 1.00 | 1.0 | 0.05 | 14.59 | 0.01 | 2.156 | 6.43 | 0.04 | 10.5 | 89.5 | 0.0 | -5.02 | 0.77 | 0.69 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 14.07 | 0.00 | 2.125 | 10.42 | 0.05 | 7.9 | 92.1 | 0.0 | -2.28 | 0.94 | 0.79 | 0.71 | — | 52890 | 6905 | 25 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UWF | 20922 | 2022-12-11 | 2019-11-05 | 3.08 | 3.26 | — | 3.3 | 0.008 | 1.08 | 0.0 | 0.05 | 16.40 | 0.01 | 2.294 | 2.14 | 0.00 | 3.1 | 96.9 | 0.0 | -3.86 | 0.70 | 0.85 | 2.48 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.19 | 0.00 | 2.243 | 6.27 | 0.92 | 3.1 | 96.9 | 0.0 | 0.94 | 0.31 | 0.67 | 0.85 | 2.48 | 3178 | 417 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7CFM | 30344 | 2022-12-11 | 2020-06-27 | 3.0 | 3.21 | — | 3.2 | 0.006 | 0.99 | 0.0 | 0.06 | 11.26 | 0.01 | 1.988 | 8.43 | 0.24 | 3.0 | 97.0 | 0.0 | -2.23 | 0.61 | 0.78 | 3.69 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 15.55 | 0.00 | 2.109 | 7.13 | 1.55 | 2.7 | 97.3 | 0.0 | 1.25 | 0.55 | 0.60 | 0.79 | 2.80 | 8081 | 1027 | 5 | 0 | 4 | 1 | 0 | logfile |