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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PQQ | 13596 | 2022-07-02 | 2021-09-18 | 3.3 | 3.44 | — | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 14.02 | 0.00 | 2.244 | 12.20 | 0.00 | 4.6 | 95.4 | 0.0 | -2.50 | 0.44 | 0.73 | 3.02 | 3.4 | 0.003 | 0.68 | 0.0 | 0.04 | 16.38 | 0.00 | 2.209 | 10.37 | 0.28 | 3.6 | 96.4 | 0.0 | -1.62 | 0.52 | 0.45 | 0.75 | 2.03 | 3207 | 417 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PQG | 13593 | 2022-07-02 | 2021-09-21 | 3.7 | 4.20 | — | 4.0 | 0.004 | 0.88 | 0.0 | 0.05 | 12.56 | 0.01 | 2.204 | 28.36 | 0.28 | 7.4 | 92.6 | 0.0 | -0.87 | 0.56 | 0.76 | 0.82 | 4.0 | 0.005 | 1.15 | 0.0 | 0.06 | 15.61 | 0.01 | 2.144 | 36.06 | 0.28 | 7.9 | 92.1 | 0.0 | -1.40 | 1.22 | 0.56 | 0.77 | 0.82 | 3251 | 423 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UHB | 26511 | 2022-07-02 | 2022-03-26 | 3.0 | 3.17 | 2.97 | 3.2 | 0.011 | 1.35 | 3.0 | 0.12 | 9.86 | 0.00 | 2.562 | 5.08 | 1.42 | 3.0 | 96.6 | 0.4 | -0.52 | 0.52 | 0.54 | -0.09 | 3.1 | 0.003 | 0.62 | 0.0 | 0.04 | 16.15 | 0.00 | 2.244 | 9.43 | 1.90 | 3.4 | 96.6 | 0.0 | 0.52 | 2.43 | 0.70 | 0.83 | 3.49 | 2141 | 270 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7QES | 13939 | 2022-07-02 | 2021-12-03 | 2.6 | 3.37 | — | 3.0 | 0.009 | 0.66 | 0.0 | 0.04 | 13.87 | 0.00 | 2.122 | 3.25 | 0.00 | 3.9 | 96.1 | 0.0 | -0.99 | 0.77 | 0.86 | 3.39 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 15.28 | 0.00 | 2.162 | 3.90 | 0.91 | 3.1 | 96.9 | 0.0 | 2.67 | 1.25 | 0.78 | 0.86 | 2.82 | 3076 | 366 | 6 | 0 | 10 | 14 | 0 | logfile |
✔ | 7QEV | 13942 | 2022-07-02 | 2021-12-03 | 2.9 | 3.46 | — | 3.1 | 0.010 | 0.74 | 0.0 | 0.05 | 13.76 | 0.00 | 2.164 | 5.92 | 0.00 | 4.3 | 95.7 | 0.0 | -0.15 | 0.79 | 0.86 | 3.19 | 3.1 | 0.003 | 0.66 | 0.0 | 0.04 | 15.95 | 0.00 | 2.153 | 5.61 | 1.17 | 2.9 | 97.1 | 0.0 | 2.25 | 1.67 | 0.79 | 0.86 | 2.57 | 3204 | 383 | 6 | 0 | 8 | 8 | 0 | logfile |
✔ | 7Z13 | 14439 | 2022-07-02 | 2022-02-24 | 3.4 | 3.29 | — | 3.3 | 0.003 | 0.66 | 2.0 | 0.04 | 15.72 | 0.00 | 1.997 | 7.37 | 0.13 | 3.8 | 96.1 | 0.0 | -0.12 | 0.66 | 0.78 | 2.01 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 17.68 | 0.00 | 2.026 | 7.53 | 0.31 | 4.1 | 95.9 | 0.0 | 0.14 | 0.48 | 0.65 | 0.81 | 1.75 | 107381 | 13128 | 42 | 106 | 32 | 0 | 0 | logfile |
✔ | 7WRL | 32732 | 2022-07-02 | 2022-01-27 | 3.51 | 3.69 | — | 3.6 | 0.006 | 1.03 | 0.0 | 0.06 | 14.71 | 0.01 | 2.289 | 5.84 | 0.00 | 13.4 | 86.6 | 0.0 | -4.19 | 0.64 | 0.78 | 2.31 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 15.83 | 0.00 | 2.221 | 11.36 | 0.28 | 12.2 | 87.8 | 0.0 | -3.33 | 0.53 | 0.63 | 0.78 | 2.78 | 3251 | 419 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WRo | 32734 | 2022-07-02 | 2022-01-27 | 3.4 | 3.62 | — | 3.6 | 0.008 | 1.11 | 0.0 | 0.07 | 13.65 | 0.01 | 2.309 | 7.58 | 0.00 | 7.6 | 92.4 | 0.0 | -1.94 | 0.58 | 0.76 | 2.56 | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 15.11 | 0.01 | 2.258 | 13.22 | 0.00 | 4.2 | 95.8 | 0.0 | -1.18 | 0.33 | 0.59 | 0.78 | 2.40 | 3179 | 412 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7PD3 | 13329 | 2022-07-02 | 2021-08-04 | 3.4 | 2.98 | 3.16 | 3.0 | 0.009 | 1.08 | 2.0 | 0.11 | 16.11 | 0.01 | 1.125 | 5.22 | 0.01 | 5.6 | 94.2 | 0.2 | -3.47 | 0.64 | 0.66 | 1.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 108076 | 9276 | 76 | 1522 | 125 | 0 | 0 | logfile |
✔ | 7UiU | 26553 | 2022-07-02 | 2022-03-29 | 2.8 | 3.11 | 2.72 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 13.60 | 0.00 | 2.356 | 4.19 | 0.00 | 4.8 | 95.2 | 0.0 | -2.09 | 0.28 | 0.82 | 1.99 | 3.3 | 0.004 | 0.95 | 0.0 | 0.04 | 17.47 | 0.00 | 2.262 | 11.74 | 1.67 | 6.0 | 94.0 | 0.0 | -1.79 | 1.38 | 0.28 | 0.89 | 2.33 | 607 | 85 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2022-07-02 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.61 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.004 | 1.12 | 0.0 | 0.04 | 9.66 | 0.00 | 2.166 | 11.82 | 0.00 | 32.0 | 68.0 | 0.0 | -5.62 | 1.49 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6R23 | 4708 | 2022-07-02 | 2019-03-15 | 4.9 | 4.57 | — | 4.6 | 0.006 | 1.07 | 0.0 | 0.05 | 16.56 | 0.01 | 2.332 | 7.52 | 0.00 | 7.9 | 92.1 | 0.0 | -4.61 | 0.60 | 0.75 | — | 4.6 | 0.003 | 0.59 | 0.0 | 0.03 | 16.52 | 0.00 | 2.361 | 7.85 | 0.00 | 6.7 | 93.3 | 0.0 | 0.29 | 3.60 | 0.60 | 0.73 | — | 1518 | 182 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TGN | 10499 | 2022-07-02 | 2019-11-17 | 3.9 | 3.83 | — | 4.0 | 0.010 | 1.73 | 0.0 | 0.12 | 11.93 | 0.01 | 2.161 | 5.17 | 1.39 | 4.7 | 95.3 | 0.0 | -3.57 | 0.54 | 0.90 | 1.73 | 4.0 | 0.004 | 0.93 | 0.0 | 0.04 | 15.61 | 0.00 | 2.436 | 12.55 | 0.00 | 2.3 | 97.7 | 0.0 | 0.20 | 1.16 | 0.53 | 0.82 | 1.30 | 672 | 88 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oG3 | 20051 | 2022-07-02 | 2019-04-01 | 4.1 | 5.37 | — | 6.5 | 0.005 | 1.53 | 0.0 | 0.00 | 0.93 | 0.00 | 2.539 | 0.00 | 0.00 | 0.0 | 99.2 | 0.8 | 0.27 | 0.46 | 0.48 | — | 6.0 | 0.006 | 1.22 | 0.0 | 0.00 | 8.59 | 0.00 | 2.605 | 57.07 | 0.00 | 14.1 | 85.9 | 0.0 | -1.78 | 2.19 | 0.66 | 0.84 | — | 1215 | 396 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 6N37 | 9339 | 2022-07-02 | 2018-11-14 | 3.8 | 3.51 | — | 4.2 | 0.009 | 1.42 | 0.0 | 0.06 | 16.98 | 0.01 | 2.399 | 13.15 | 0.00 | 14.7 | 85.3 | 0.0 | -5.92 | 0.51 | 0.77 | 3.18 | 3.6 | 0.004 | 0.78 | 0.0 | 0.04 | 18.43 | 0.00 | 2.266 | 20.72 | 0.80 | 11.2 | 88.8 | 0.0 | -5.14 | 0.89 | 0.52 | 0.77 | 2.42 | 2580 | 360 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N3B | 9350 | 2022-07-02 | 2018-11-14 | 3.8 | 3.75 | — | 4.0 | 0.010 | 1.21 | 0.0 | 0.05 | 11.40 | 0.01 | 2.253 | 20.70 | 0.00 | 13.7 | 86.3 | 0.0 | -5.17 | 0.41 | 0.71 | 2.90 | 4.0 | 0.005 | 0.87 | 0.0 | 0.04 | 16.51 | 0.01 | 2.102 | 26.34 | 1.51 | 13.2 | 86.8 | 0.0 | -5.29 | 1.48 | 0.42 | 0.71 | 1.88 | 2735 | 385 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6J2X | 9772 | 2022-07-02 | 2019-01-03 | 3.8 | 3.99 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.12 | 0.00 | 2.220 | 6.73 | 0.00 | 5.8 | 94.1 | 0.1 | -3.52 | 0.80 | 0.70 | 0.49 | 3.9 | 0.006 | 0.88 | 1.0 | 0.05 | 15.41 | 0.01 | 1.603 | 21.95 | 0.40 | 4.7 | 95.2 | 0.2 | -0.89 | 1.88 | 0.84 | 0.77 | 0.95 | 106176 | 13501 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RWE | 10038 | 2022-07-02 | 2019-06-04 | 3.0 | 3.12 | — | 3.7 | 0.009 | 1.02 | 1.0 | 0.06 | 13.12 | 0.01 | 1.975 | 6.79 | 0.73 | 7.4 | 92.5 | 0.1 | -4.84 | 0.44 | 0.32 | 0.00 | 3.1 | 0.008 | 1.01 | 2.0 | 0.05 | 18.21 | 0.01 | 2.002 | 17.29 | 2.52 | 6.2 | 93.8 | 0.0 | -1.73 | 1.38 | 0.71 | 0.73 | 1.38 | 53719 | 6454 | 26 | 95 | 8 | 0 | 0 | logfile |
✔ | 6MRT | 9212 | 2022-07-02 | 2018-10-15 | 2.8 | 2.93 | — | 2.9 | 0.008 | 0.90 | 0.0 | 0.05 | 10.67 | 0.01 | 2.260 | 1.61 | 0.82 | 1.1 | 98.9 | 0.0 | -1.27 | 0.70 | 0.84 | 3.77 | 2.9 | 0.003 | 0.46 | 0.0 | 0.03 | 15.43 | 0.00 | 2.226 | 3.14 | 1.29 | 0.5 | 99.5 | 0.0 | 5.71 | 3.08 | 0.73 | 0.87 | 2.07 | 26868 | 3420 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2022-07-02 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.82 | 0.0 | 0.04 | 4.96 | 0.00 | 2.368 | 4.42 | 0.00 | 8.3 | 91.7 | 0.0 | -1.63 | 1.58 | 0.82 | 0.76 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |