The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8FXH | 29533 | 2024-03-21 | 2023-01-24 | 2.8 | 2.94 | 2.88 | 4.0 | 0.006 | 1.37 | 50.0 | 0.10 | 17.25 | 0.01 | 2.235 | 6.73 | 1.19 | 7.8 | 91.8 | 0.4 | -1.03 | 0.32 | 0.19 | 0.18 | 2.9 | 0.003 | 0.73 | 0.0 | 0.05 | 18.05 | 0.01 | 2.050 | 6.85 | 2.04 | 8.1 | 91.6 | 0.3 | -1.14 | 1.88 | 0.76 | 0.85 | 1.88 | 30228 | 3786 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AS9 | 11890 | 2024-03-19 | 2020-10-27 | 3.5 | 4.52 | 3.51 | 4.2 | 0.007 | 0.98 | 0.0 | 0.05 | 24.57 | 0.01 | 1.976 | 8.25 | 0.07 | 13.0 | 86.6 | 0.4 | -4.86 | 0.92 | 0.83 | 0.18 | 4.2 | 0.004 | 0.75 | 0.0 | 0.04 | 24.64 | 0.01 | 2.041 | 30.77 | 5.50 | 11.3 | 88.6 | 0.1 | -2.62 | 0.71 | 0.92 | 0.84 | 0.28 | 93137 | 3720 | 32 | 2999 | 0 | 0 | 0 | logfile |
✔ | 7W6P | 32331 | 2024-03-11 | 2021-12-02 | 3.47 | 3.79 | — | 9.6 | 0.004 | 0.70 | 0.0 | 0.04 | 13.78 | 0.00 | 2.196 | 14.60 | 0.11 | 7.0 | 93.0 | 0.0 | -0.94 | 0.22 | 0.11 | 0.18 | 8.7 | 0.003 | 0.66 | 0.0 | 0.04 | 15.30 | 0.00 | 2.211 | 13.58 | 2.11 | 5.7 | 94.3 | 0.0 | -0.69 | 1.89 | 0.31 | 0.25 | 0.29 | 8408 | 1083 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7YLV | 33918 | 2024-03-13 | 2022-07-27 | 3.91 | 4.23 | 4.38 | 4.3 | 0.009 | 0.68 | 0.0 | 0.06 | 10.36 | 0.00 | 2.239 | 1.53 | 0.03 | 2.3 | 97.6 | 0.2 | -0.18 | 0.55 | 0.40 | 0.18 | 4.3 | 0.004 | 1.05 | 1.0 | 0.05 | 15.61 | 0.00 | 2.080 | 25.07 | 2.82 | 3.6 | 96.3 | 0.1 | -0.32 | 2.25 | 0.74 | 0.73 | 0.18 | 65495 | 8564 | 17 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EU2 | 3957 | 2024-03-23 | 2017-10-27 | 3.4 | 3.45 | — | 6.0 | 0.004 | 1.04 | 0.0 | 0.06 | 11.35 | 0.01 | 1.787 | 5.04 | 0.40 | 13.0 | 86.5 | 0.5 | -5.22 | 0.27 | 0.04 | 0.18 | 3.4 | 0.006 | 1.00 | 2.0 | 0.05 | 15.52 | 0.01 | 1.818 | 17.85 | 2.02 | 11.9 | 87.8 | 0.3 | -2.67 | 1.60 | 0.61 | 0.58 | 0.33 | 38329 | 4825 | 22 | 0 | 7 | 0 | 0 | logfile |
✔ | 8HQo | 34952 | 2024-03-12 | 2022-12-13 | 3.2 | 3.45 | 3.81 | 4.0 | 0.006 | 0.79 | 0.0 | 0.05 | 13.20 | 0.01 | 0.497 | 6.45 | 0.00 | 2.6 | 97.4 | 0.0 | -1.42 | 0.54 | 0.57 | 0.18 | 3.4 | 0.006 | 0.72 | 0.0 | 0.04 | 16.25 | 0.00 | 1.867 | 40.29 | 2.90 | 5.3 | 94.7 | 0.0 | -0.16 | 1.76 | 0.64 | 0.81 | 1.38 | 62613 | 7656 | 33 | 0 | 0 | 0 | 1902 | logfile |
✔ | 7DN3 | 30779 | 2024-03-23 | 2020-12-08 | 3.5 | 4.31 | — | 3.8 | 0.012 | 1.43 | 31.0 | 0.09 | 17.05 | 0.01 | 1.961 | 21.63 | 4.73 | 9.9 | 89.4 | 0.7 | -4.77 | 0.75 | 0.61 | 0.19 | 3.8 | 0.004 | 0.86 | 0.0 | 0.05 | 17.63 | 0.00 | 1.975 | 19.44 | 2.54 | 9.4 | 90.5 | 0.2 | -1.75 | 1.65 | 0.84 | 0.81 | 0.92 | 36856 | 4521 | 26 | 45 | 8 | 0 | 0 | logfile |
✔ | 7YPJ | 34002 | 2024-03-21 | 2022-08-03 | 3.8 | 4.94 | 3.94 | 3.8 | 0.008 | 1.26 | 0.0 | 0.07 | 13.23 | 0.01 | 2.167 | 19.20 | 0.12 | 8.5 | 91.5 | 0.1 | -2.82 | 0.87 | 0.69 | 0.19 | 3.8 | 0.003 | 0.80 | 0.0 | 0.04 | 15.27 | 0.00 | 2.051 | 27.99 | 1.60 | 7.8 | 92.2 | 0.0 | -1.57 | 1.24 | 0.88 | 0.73 | 0.19 | 30478 | 3865 | 9 | 0 | 4 | 0 | 0 | logfile |
✔ | 8T23 | 40979 | 2024-03-11 | 2023-06-05 | 3.87 | 4.12 | 4.24 | 7.5 | 0.005 | 1.00 | 0.0 | 0.05 | 19.22 | 0.01 | 2.136 | 16.85 | 0.59 | 11.9 | 88.1 | 0.0 | -3.06 | 0.59 | 0.48 | 0.19 | 7.3 | 0.003 | 0.82 | 0.0 | 0.05 | 18.12 | 0.01 | 2.123 | 17.32 | 3.81 | 11.5 | 88.5 | 0.0 | -2.57 | 1.42 | 0.62 | 0.55 | -0.26 | 6451 | 781 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6RED | 4850 | 2024-03-22 | 2019-04-12 | 3.0 | 3.22 | 3.14 | 27.0 | 0.012 | 1.04 | 0.0 | 0.06 | 14.61 | 0.01 | 2.140 | 5.83 | 0.31 | 4.7 | 95.2 | 0.1 | -3.86 | 0.16 | 0.02 | 0.19 | 27.0 | 0.004 | 0.80 | 0.0 | 0.05 | 15.82 | 0.01 | 1.837 | 19.88 | 2.41 | 5.4 | 94.4 | 0.1 | -1.04 | 0.96 | 0.24 | 0.16 | 0.19 | 33899 | 4503 | 25 | 0 | 10 | 0 | 0 | logfile |
✔ | 7MVU | 24056 | 2024-03-19 | 2021-05-15 | 3.77 | 4.87 | 3.73 | 4.0 | 0.002 | 0.36 | 0.0 | 0.03 | 6.38 | 0.00 | 2.187 | 3.55 | 0.00 | 1.1 | 98.9 | 0.0 | -0.33 | 0.85 | 0.73 | 0.19 | 4.0 | 0.002 | 0.57 | 0.0 | 0.03 | 11.84 | 0.00 | 1.921 | 10.41 | 1.36 | 2.7 | 97.3 | 0.0 | 2.74 | 2.05 | 0.88 | 0.82 | 0.36 | 25645 | 1604 | 2 | 0 | 0 | 0 | 12841 | logfile |
✔ | 7FJo | 31625 | 2024-03-20 | 2021-08-04 | 3.34 | 3.72 | — | 3.5 | 0.012 | 1.56 | 4.0 | 0.09 | 12.54 | 0.02 | 1.277 | 9.35 | 3.26 | 7.2 | 92.4 | 0.4 | -1.06 | 0.55 | 0.36 | 0.19 | 3.5 | 0.008 | 0.90 | 0.0 | 0.05 | 14.86 | 0.00 | 2.029 | 14.34 | 2.02 | 6.2 | 93.7 | 0.1 | -0.68 | 1.94 | 0.78 | 0.82 | 1.95 | 28547 | 3640 | 12 | 0 | 25 | 0 | 0 | logfile |
✔ | 8SPo | 40680 | 2024-03-21 | 2023-05-03 | 2.98 | 2.34 | 3.17 | 2.1 | 0.004 | 0.60 | 0.0 | 0.26 | 18.84 | 0.00 | 0.334 | 11.05 | 0.00 | 6.0 | 94.0 | 0.0 | -1.15 | 0.46 | 0.30 | 0.19 | 1.6 | 0.004 | 0.72 | 0.0 | 0.04 | 18.88 | 0.00 | 1.817 | 12.21 | 2.22 | 6.6 | 93.4 | 0.0 | -1.13 | 1.34 | 0.57 | 0.49 | 1.24 | 31307 | 3428 | 22 | 154 | 6 | 0 | 0 | logfile |
✔ | 7MF3 | 23810 | 2024-03-19 | 2021-04-08 | 3.4 | 4.14 | — | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 15.41 | 0.00 | 1.985 | 17.36 | 0.04 | 6.5 | 93.5 | 0.0 | -0.34 | 0.90 | 0.73 | 0.19 | 3.1 | 0.002 | 0.70 | 0.0 | 0.04 | 17.51 | 0.00 | 1.949 | 17.16 | 1.41 | 6.9 | 93.1 | 0.0 | -0.86 | 1.44 | 0.91 | 0.74 | 0.14 | 22938 | 2822 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 5Y4o | 6805 | 2024-03-15 | 2017-08-04 | 3.8 | 3.55 | — | 3.6 | 0.022 | 2.44 | 28.0 | 0.12 | 19.88 | 0.02 | 0.471 | 78.50 | 20.31 | 7.8 | 87.8 | 4.5 | -2.08 | 0.55 | 0.62 | 0.20 | 3.6 | 0.003 | 0.76 | 0.0 | 0.04 | 17.30 | 0.00 | 2.069 | 13.36 | 5.80 | 7.8 | 91.5 | 0.6 | -0.34 | 1.75 | 0.59 | 0.73 | 1.09 | 12341 | 1561 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oR0 | 17114 | 2024-03-17 | 2023-04-12 | 3.1 | 2.37 | 2.99 | 1.7 | 0.004 | 0.64 | 1.0 | 0.04 | 15.61 | 0.00 | 1.149 | 6.33 | 0.51 | 3.9 | 96.1 | 0.0 | 0.59 | 0.64 | 0.56 | 0.20 | 1.5 | 0.003 | 0.67 | 0.0 | 0.04 | 16.52 | 0.00 | 2.066 | 11.47 | 2.41 | 4.3 | 95.7 | 0.0 | 0.21 | 1.27 | 0.69 | 0.64 | 0.60 | 18823 | 2489 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 6PMJ | 20395 | 2024-03-11 | 2019-07-02 | 3.91 | 5.34 | — | 4.4 | 0.011 | 1.21 | 0.0 | 0.06 | 16.10 | 0.01 | 2.011 | 11.04 | 0.31 | 10.4 | 89.3 | 0.3 | -4.41 | 0.67 | 0.43 | 0.20 | 4.4 | 0.005 | 0.78 | 0.0 | 0.04 | 17.77 | 0.01 | 1.544 | 30.07 | 2.96 | 10.6 | 89.3 | 0.1 | -2.53 | 1.67 | 0.89 | 0.77 | 0.02 | 57984 | 3453 | 10 | 110 | 4 | 0 | 28609 | logfile |
✔ | 6PMi | 20394 | 2024-03-11 | 2019-07-02 | 3.86 | 4.66 | — | 4.1 | 0.012 | 1.26 | 0.0 | 0.06 | 16.10 | 0.01 | 1.949 | 12.35 | 0.24 | 10.7 | 88.9 | 0.4 | -4.48 | 0.69 | 0.51 | 0.20 | 4.1 | 0.005 | 0.77 | 0.0 | 0.04 | 17.52 | 0.01 | 1.786 | 27.74 | 2.89 | 11.6 | 88.2 | 0.2 | -2.80 | 0.99 | 0.86 | 0.78 | 0.35 | 57985 | 3453 | 10 | 110 | 4 | 0 | 28610 | logfile |
✔ | 6CB8 | 7449 | 2024-03-20 | 2018-02-02 | 3.8 | 4.11 | — | 4.7 | 0.006 | 0.84 | 0.0 | 0.05 | 11.71 | 0.01 | 1.542 | 37.90 | 0.00 | 18.6 | 81.4 | 0.0 | -5.72 | 0.54 | 0.27 | 0.20 | 4.0 | 0.004 | 0.75 | 0.0 | 0.04 | 15.82 | 0.01 | 1.853 | 19.01 | 2.68 | 9.9 | 90.1 | 0.0 | -2.79 | 2.65 | 0.72 | 0.67 | 0.46 | 100224 | 6210 | 27 | 0 | 27 | 0 | 50436 | logfile |
✔ | 7CMi | 30407 | 2024-03-11 | 2020-07-27 | 2.9 | 3.36 | — | 3.3 | 0.006 | 1.01 | 0.0 | 0.05 | 16.61 | 0.01 | 1.904 | 7.49 | 1.44 | 7.2 | 91.4 | 1.4 | -5.99 | 0.62 | 0.67 | 0.20 | 3.3 | 0.003 | 0.84 | 0.0 | 0.04 | 16.15 | 0.00 | 2.080 | 8.90 | 1.97 | 7.3 | 92.6 | 0.1 | -0.31 | 1.16 | 0.67 | 0.85 | 1.69 | 7353 | 928 | 7 | 0 | 10 | 6 | 0 | logfile |