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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DMP | 30766 | 2023-04-22 | 2020-12-05 | 3.2 | 2.58 | — | 3.3 | 0.003 | 0.76 | 1.0 | 0.05 | 14.92 | 0.01 | 1.020 | 10.12 | 1.61 | 7.4 | 92.6 | 0.0 | -4.33 | 0.72 | 0.69 | 2.30 | 3.3 | 0.003 | 0.72 | 0.0 | 0.04 | 17.00 | 0.00 | 2.018 | 17.63 | 0.84 | 8.2 | 91.8 | 0.0 | -2.51 | 0.74 | 0.76 | 0.76 | 2.30 | 12308 | 1528 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JAC | 6343 | 2023-04-23 | 2015-06-05 | 4.8 | 6.42 | — | 9.4 | 0.007 | 1.81 | 3.0 | 0.07 | 10.64 | 0.03 | 1.020 | 57.64 | 4.17 | 5.0 | 90.3 | 4.8 | 1.36 | 0.42 | 0.40 | — | 9.1 | 0.012 | 1.69 | 0.0 | 0.06 | 13.69 | 0.01 | 1.923 | 77.11 | 0.00 | 27.1 | 71.7 | 1.2 | -5.31 | 3.69 | 0.54 | 0.61 | — | 15741 | 1716 | 3 | 0 | 1038 | 0 | 0 | logfile |
✔ | 5FN3 | 3238 | 2023-04-21 | 2015-11-10 | 4.1 | 4.53 | — | 4.1 | 0.011 | 1.81 | 26.0 | 0.10 | 18.64 | 0.01 | 1.021 | 20.42 | 11.34 | 10.7 | 85.3 | 4.0 | -1.54 | 0.66 | 0.60 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.04 | 13.92 | 0.01 | 2.063 | 18.67 | 0.00 | 8.4 | 90.6 | 1.0 | -0.49 | 2.22 | 0.71 | 0.79 | — | 10291 | 1318 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XK3 | 33242 | 2023-04-23 | 2022-04-19 | 3.1 | 3.33 | 3.10 | 3.3 | 0.007 | 0.96 | 6.0 | 0.05 | 15.46 | 0.01 | 1.026 | 6.23 | 0.58 | 3.3 | 96.5 | 0.2 | -2.55 | 0.71 | 0.88 | 3.79 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.89 | 0.00 | 2.153 | 5.73 | 0.13 | 2.9 | 97.0 | 0.1 | 0.13 | 0.34 | 0.73 | 0.90 | 3.07 | 14846 | 1894 | 11 | 0 | 11 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2023-04-28 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.110 | 23.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 6R25 | 4710 | 2023-04-24 | 2019-03-15 | 4.61 | 8.06 | — | 3.8 | 0.009 | 1.05 | 0.0 | 0.06 | 25.57 | 0.02 | 1.036 | 12.86 | 5.67 | 4.9 | 93.8 | 1.3 | -2.97 | 0.74 | 0.45 | — | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 25.62 | 0.00 | 2.041 | 14.59 | 0.00 | 2.6 | 97.4 | 0.1 | 1.18 | 1.46 | 0.88 | 0.70 | — | 18654 | 1544 | 16 | 294 | 4 | 314 | 0 | logfile |
✔ | 7WTE | 32780 | 2023-04-28 | 2022-02-04 | 3.3 | 4.21 | — | 3.5 | 0.004 | 0.74 | 2.0 | 0.05 | 14.49 | 0.00 | 1.040 | 11.76 | 1.95 | 6.5 | 93.4 | 0.1 | -0.47 | 0.85 | 0.77 | 0.95 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.59 | 0.00 | 2.118 | 11.45 | 0.10 | 6.3 | 93.7 | 0.0 | -0.28 | 1.27 | 0.87 | 0.81 | 0.85 | 27160 | 3493 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 5TJ5 | 8409 | 2023-04-23 | 2016-10-03 | 3.9 | 4.19 | — | 4.1 | 0.010 | 1.29 | 0.0 | 0.05 | 9.13 | 0.01 | 1.040 | 27.77 | 0.12 | 14.4 | 85.2 | 0.4 | -6.37 | 0.62 | 0.69 | 1.87 | 4.1 | 0.004 | 0.89 | 0.0 | 0.04 | 12.82 | 0.00 | 2.018 | 15.16 | 1.10 | 6.4 | 93.3 | 0.2 | 0.39 | 1.76 | 0.63 | 0.74 | 1.06 | 14976 | 2102 | 14 | 0 | 365 | 0 | 0 | logfile |
✔ | 7Woo | 32653 | 2023-04-24 | 2022-01-22 | 3.71 | 4.08 | — | 3.9 | 0.010 | 1.69 | 139.0 | 0.10 | 15.86 | 0.01 | 1.041 | 23.12 | 4.33 | 9.3 | 88.5 | 2.2 | -3.11 | 0.47 | 0.44 | 0.31 | 3.9 | 0.003 | 0.81 | 0.0 | 0.04 | 16.42 | 0.00 | 2.097 | 15.49 | 0.35 | 8.6 | 91.1 | 0.3 | -0.38 | 1.64 | 0.47 | 0.44 | 0.13 | 66949 | 8644 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LJ3 | 23388 | 2023-04-27 | 2021-01-28 | 2.9 | 2.92 | — | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 17.12 | 0.00 | 1.041 | 27.61 | 3.30 | 3.6 | 96.0 | 0.4 | 0.29 | 0.10 | 0.23 | -0.14 | 2.9 | 0.003 | 0.60 | 0.0 | 0.03 | 19.24 | 0.00 | 2.017 | 7.67 | 4.04 | 4.5 | 95.4 | 0.2 | 2.58 | 1.42 | 0.22 | 0.79 | 1.76 | 25714 | 2564 | 12 | 225 | 0 | 0 | 0 | logfile |
✔ | 7ELH | 31183 | 2023-04-22 | 2021-04-11 | 3.3 | 3.97 | — | 3.7 | 0.006 | 0.82 | 1.0 | 0.05 | 12.97 | 0.00 | 1.043 | 9.19 | 0.21 | 3.9 | 96.1 | 0.1 | 0.36 | 0.35 | 0.69 | 3.16 | 3.6 | 0.003 | 0.51 | 0.0 | 0.04 | 14.69 | 0.00 | 1.859 | 28.25 | 0.29 | 3.7 | 96.3 | 0.0 | 1.24 | 1.15 | 0.38 | 0.89 | 2.53 | 114995 | 13378 | 27 | 310 | 1 | 0 | 3098 | logfile |
✔ | 7CZ6 | 30507 | 2023-04-20 | 2020-09-07 | 4.1 | 4.04 | — | 4.1 | 0.009 | 1.62 | 0.0 | 0.05 | 8.57 | 0.01 | 1.047 | 61.25 | 0.00 | 8.1 | 91.9 | 0.0 | -1.66 | 0.68 | 0.64 | — | 4.1 | 0.004 | 0.84 | 0.0 | 0.05 | 11.13 | 0.01 | 2.108 | 15.25 | 0.00 | 5.5 | 94.5 | 0.0 | -2.13 | 0.91 | 0.65 | 0.72 | — | 4535 | 630 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XBW | 22121 | 2023-04-22 | 2020-06-07 | 3.37 | 3.48 | — | 3.4 | 0.010 | 1.30 | 80.0 | 0.09 | 15.41 | 0.01 | 1.049 | 8.64 | 0.61 | 3.3 | 96.5 | 0.3 | -5.55 | 0.74 | 0.85 | 2.39 | 3.4 | 0.005 | 0.74 | 0.0 | 0.04 | 16.62 | 0.00 | 2.019 | 11.18 | 0.45 | 5.5 | 94.5 | 0.1 | -0.71 | 1.10 | 0.76 | 0.89 | 2.20 | 63090 | 8186 | 38 | 0 | 18 | 0 | 0 | logfile |
✔ | 5XTD | 6773 | 2023-04-24 | 2017-06-19 | 3.7 | 3.83 | — | 3.7 | 0.012 | 1.58 | 1.0 | 0.07 | 12.18 | 0.01 | 1.049 | 27.86 | 0.83 | 6.5 | 90.6 | 2.9 | -1.69 | 0.75 | 0.72 | 2.51 | 3.7 | 0.004 | 0.82 | 0.0 | 0.04 | 15.47 | 0.01 | 2.093 | 17.99 | 0.45 | 6.8 | 92.6 | 0.6 | -0.26 | 1.40 | 0.78 | 0.78 | 1.53 | 66789 | 8191 | 62 | 0 | 30 | 0 | 0 | logfile |
✔ | 7X27 | 32960 | 2023-04-26 | 2022-02-25 | 2.49 | 2.92 | 2.58 | 2.7 | 0.004 | 0.75 | 0.0 | 0.04 | 18.74 | 0.00 | 1.052 | 7.39 | 9.19 | 6.8 | 93.2 | 0.0 | -1.20 | 0.84 | 0.87 | 3.07 | 2.7 | 0.003 | 0.60 | 0.0 | 0.04 | 18.27 | 0.00 | 2.189 | 6.68 | 6.95 | 6.2 | 93.8 | 0.0 | -0.39 | 1.15 | 0.84 | 0.88 | 3.28 | 22770 | 2949 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MCA | 23755 | 2023-04-27 | 2021-04-01 | 3.6 | 3.75 | 3.58 | 3.8 | 0.007 | 0.98 | 0.0 | 0.06 | 19.21 | 0.01 | 1.053 | 8.11 | 0.75 | 8.2 | 91.7 | 0.1 | -5.13 | 0.77 | 0.79 | 2.32 | 3.7 | 0.005 | 0.70 | 0.0 | 0.04 | 20.09 | 0.00 | 1.910 | 11.17 | 0.71 | 9.2 | 90.8 | 0.0 | -2.25 | 1.98 | 0.77 | 0.81 | 2.15 | 24692 | 2760 | 13 | 100 | 8 | 0 | 0 | logfile |
✔ | 7K36 | 22650 | 2023-04-24 | 2020-09-10 | 3.3 | 3.90 | — | 3.5 | 0.007 | 0.74 | 0.0 | 0.18 | 15.82 | 0.00 | 1.054 | 15.42 | 7.26 | 6.0 | 94.0 | 0.0 | -2.36 | 0.84 | 0.85 | 2.39 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 16.24 | 0.00 | 2.072 | 11.60 | 0.18 | 3.3 | 96.7 | 0.0 | 1.58 | 0.60 | 0.84 | 0.86 | 1.82 | 16613 | 2183 | 12 | 0 | 5 | 0 | 0 | logfile |
✘ | 6iGM | 9668 | 2023-04-27 | 2018-09-25 | 4.0 | 4.14 | — | 4.1 | 0.004 | 0.88 | 0.0 | 0.05 | 10.13 | 0.01 | 1.054 | 20.78 | 2.70 | 7.3 | 91.6 | 1.1 | -4.30 | 0.70 | 0.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24257 | 3054 | 9 | 0 | 62 | 0 | 0 | logfile |
✔ | 3J9L | 2871 | 2023-04-21 | 2015-02-04 | 4.0 | 4.10 | — | 4.0 | 0.022 | 1.96 | 105.0 | 0.12 | 19.47 | 0.01 | 1.058 | 81.48 | 27.30 | 10.5 | 88.6 | 0.9 | -4.09 | 0.66 | 0.68 | — | 4.0 | 0.048 | 3.15 | 43.0 | 0.12 | 19.35 | 0.02 | 1.814 | 99.41 | 4.32 | 39.9 | 58.2 | 1.9 | -7.71 | 2.86 | 0.73 | 0.81 | — | 112951 | 8688 | 31 | 0 | 8320 | 0 | 0 | logfile |
✔ | 3J9K | 2870 | 2023-04-26 | 2015-02-04 | 4.1 | 4.22 | — | 4.1 | 0.022 | 2.13 | 128.0 | 0.13 | 20.83 | 0.01 | 1.058 | 99.51 | 29.75 | 12.8 | 86.2 | 1.0 | -3.18 | 0.68 | 0.68 | — | 4.1 | 0.003 | 0.77 | 0.0 | 0.04 | 13.66 | 0.00 | 2.071 | 16.76 | 0.01 | 5.4 | 94.5 | 0.2 | -1.08 | 1.15 | 0.69 | 0.70 | — | 126512 | 10352 | 48 | 0 | 8304 | 0 | 0 | logfile |